Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.82□□□□□ -1.96
Scaf1Q5U4C3 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Scaf1Q5U4C3 Gm25090-201ENSMUST00000104000 132 ntBASIC2.81□□□□□ -1.96
Scaf1Q5U4C3 Gm24177-201ENSMUST00000158927 131 ntBASIC2.81□□□□□ -1.96
Scaf1Q5U4C3 Gm22070-201ENSMUST00000178475 107 ntBASIC2.81□□□□□ -1.96
Scaf1Q5U4C3 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.81□□□□□ -1.96
Scaf1Q5U4C3 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Scaf1Q5U4C3 Gm25380-201ENSMUST00000175463 107 ntBASIC2.8□□□□□ -1.96
Scaf1Q5U4C3 Gm24641-201ENSMUST00000178055 107 ntBASIC2.8□□□□□ -1.96
Scaf1Q5U4C3 Gm25484-201ENSMUST00000178217 107 ntBASIC2.8□□□□□ -1.96
Scaf1Q5U4C3 Gm26138-201ENSMUST00000179236 107 ntBASIC2.8□□□□□ -1.96
Scaf1Q5U4C3 Gm22821-201ENSMUST00000179288 107 ntBASIC2.8□□□□□ -1.96
Scaf1Q5U4C3 Gm42795-201ENSMUST00000198847 76 ntBASIC2.8□□□□□ -1.96
Scaf1Q5U4C3 Gm23140-201ENSMUST00000082487 107 ntBASIC2.8□□□□□ -1.96
Scaf1Q5U4C3 Gm23299-201ENSMUST00000082708 79 ntBASIC2.8□□□□□ -1.96
Scaf1Q5U4C3 Gm24151-201ENSMUST00000082758 141 ntBASIC2.8□□□□□ -1.96
Scaf1Q5U4C3 Gm23298-201ENSMUST00000083181 107 ntBASIC2.8□□□□□ -1.96
Scaf1Q5U4C3 Gm24614-201ENSMUST00000083269 107 ntBASIC2.8□□□□□ -1.96
Scaf1Q5U4C3 Gm22057-201ENSMUST00000083387 107 ntBASIC2.8□□□□□ -1.96
Scaf1Q5U4C3 Gm25516-201ENSMUST00000083857 107 ntBASIC2.8□□□□□ -1.96
Scaf1Q5U4C3 Gm22914-201ENSMUST00000175195 77 ntBASIC2.79□□□□□ -1.96
Scaf1Q5U4C3 Mir7225-201ENSMUST00000184178 54 ntBASIC2.79□□□□□ -1.96
Scaf1Q5U4C3 Mir7016-201ENSMUST00000184308 72 ntBASIC2.79□□□□□ -1.96
Scaf1Q5U4C3 Gm26280-201ENSMUST00000157096 101 ntBASIC2.78□□□□□ -1.96
Scaf1Q5U4C3 Mir669n-201ENSMUST00000158636 54 ntBASIC2.78□□□□□ -1.96
Scaf1Q5U4C3 Gm24229-201ENSMUST00000158830 118 ntBASIC2.78□□□□□ -1.96
Scaf1Q5U4C3 Gm23813-201ENSMUST00000175153 77 ntBASIC2.78□□□□□ -1.96
Scaf1Q5U4C3 Gm24572-201ENSMUST00000175505 88 ntBASIC2.78□□□□□ -1.96
Scaf1Q5U4C3 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Scaf1Q5U4C3 Gm14674-201ENSMUST00000117816 342 ntBASIC2.77□□□□□ -1.97
Scaf1Q5U4C3 Gm6444-201ENSMUST00000119611 458 ntBASIC2.77□□□□□ -1.97
Scaf1Q5U4C3 Gm22929-201ENSMUST00000175517 107 ntBASIC2.77□□□□□ -1.97
Scaf1Q5U4C3 Gm11248-201ENSMUST00000119568 201 ntBASIC2.76□□□□□ -1.97
Scaf1Q5U4C3 Gm22490-201ENSMUST00000157188 119 ntBASIC2.76□□□□□ -1.97
Scaf1Q5U4C3 Gm23670-201ENSMUST00000157469 119 ntBASIC2.76□□□□□ -1.97
Scaf1Q5U4C3 Gm22638-201ENSMUST00000179674 107 ntBASIC2.76□□□□□ -1.97
Scaf1Q5U4C3 Gm45654-201ENSMUST00000210980 123 ntBASIC2.76□□□□□ -1.97
Scaf1Q5U4C3 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.76□□□□□ -1.97
Scaf1Q5U4C3 Gm23377-201ENSMUST00000082943 126 ntBASIC2.76□□□□□ -1.97
Scaf1Q5U4C3 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.76□□□□□ -1.97
Scaf1Q5U4C3 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.75□□□□□ -1.97
Scaf1Q5U4C3 Traj61-201ENSMUST00000165025 72 ntBASIC2.75□□□□□ -1.97
Scaf1Q5U4C3 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Scaf1Q5U4C3 Mir7017-201ENSMUST00000184894 62 ntBASIC2.75□□□□□ -1.97
Scaf1Q5U4C3 Gm22723-201ENSMUST00000083820 129 ntBASIC2.75□□□□□ -1.97
Scaf1Q5U4C3 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Scaf1Q5U4C3 Gm22004-201ENSMUST00000101884 107 ntBASIC2.74□□□□□ -1.97
Scaf1Q5U4C3 Mir544-201ENSMUST00000103813 78 ntBASIC2.74□□□□□ -1.97
Scaf1Q5U4C3 U6.1-201ENSMUST00000157443 101 ntBASIC2.74□□□□□ -1.97
Scaf1Q5U4C3 Mir6995-201ENSMUST00000183658 71 ntBASIC2.74□□□□□ -1.97
Scaf1Q5U4C3 Gm24313-201ENSMUST00000082561 133 ntBASIC2.74□□□□□ -1.97
Scaf1Q5U4C3 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.74□□□□□ -1.97
Scaf1Q5U4C3 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Scaf1Q5U4C3 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Scaf1Q5U4C3 Gm26081-201ENSMUST00000104068 132 ntBASIC2.73□□□□□ -1.97
Scaf1Q5U4C3 Gm26038-201ENSMUST00000158151 106 ntBASIC2.73□□□□□ -1.97
Scaf1Q5U4C3 Gm28862-201ENSMUST00000188246 163 ntBASIC2.73□□□□□ -1.97
Scaf1Q5U4C3 Gm28256-201ENSMUST00000188953 139 ntBASIC2.73□□□□□ -1.97
Scaf1Q5U4C3 Gm28559-201ENSMUST00000190532 139 ntBASIC2.73□□□□□ -1.97
Scaf1Q5U4C3 Snord1a-201ENSMUST00000083160 74 ntBASIC2.73□□□□□ -1.97
Scaf1Q5U4C3 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Scaf1Q5U4C3 Gm23342-201ENSMUST00000158958 115 ntBASIC2.72□□□□□ -1.97
Scaf1Q5U4C3 Gm22802-201ENSMUST00000175621 89 ntBASIC2.72□□□□□ -1.97
Scaf1Q5U4C3 Gm28270-201ENSMUST00000188550 109 ntBASIC2.72□□□□□ -1.97
Scaf1Q5U4C3 Gm28328-201ENSMUST00000188869 109 ntBASIC2.72□□□□□ -1.97
Scaf1Q5U4C3 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.72□□□□□ -1.97
Scaf1Q5U4C3 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.72□□□□□ -1.97
Scaf1Q5U4C3 Snora2b-201ENSMUST00000084005 137 ntBASIC2.72□□□□□ -1.97
Scaf1Q5U4C3 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Scaf1Q5U4C3 Gm15692-201ENSMUST00000152173 352 ntBASIC2.71□□□□□ -1.98
Scaf1Q5U4C3 Gm24401-201ENSMUST00000157868 91 ntBASIC2.71□□□□□ -1.98
Scaf1Q5U4C3 Gm20118-201ENSMUST00000187207 162 ntBASIC2.71□□□□□ -1.98
Scaf1Q5U4C3 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.71□□□□□ -1.98
Scaf1Q5U4C3 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.71□□□□□ -1.98
Scaf1Q5U4C3 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Scaf1Q5U4C3 Gm25068-201ENSMUST00000103895 110 ntBASIC2.7□□□□□ -1.98
Scaf1Q5U4C3 Gm23010-201ENSMUST00000104151 126 ntBASIC2.7□□□□□ -1.98
Scaf1Q5U4C3 n-R5s63-201ENSMUST00000122756 103 ntBASIC2.7□□□□□ -1.98
Scaf1Q5U4C3 Gm24478-201ENSMUST00000157439 158 ntBASIC2.7□□□□□ -1.98
Scaf1Q5U4C3 Mir7675-201ENSMUST00000184262 58 ntBASIC2.7□□□□□ -1.98
Scaf1Q5U4C3 Gm43324-201ENSMUST00000197482 289 ntBASIC2.7□□□□□ -1.98
Scaf1Q5U4C3 Snora41-201ENSMUST00000082668 132 ntBASIC2.7□□□□□ -1.98
Scaf1Q5U4C3 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.69□□□□□ -1.98
Scaf1Q5U4C3 Gm24984-201ENSMUST00000104454 133 ntBASIC2.69□□□□□ -1.98
Scaf1Q5U4C3 Gm23109-201ENSMUST00000116867 126 ntBASIC2.69□□□□□ -1.98
Scaf1Q5U4C3 Gm25544-201ENSMUST00000122676 120 ntBASIC2.69□□□□□ -1.98
Scaf1Q5U4C3 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.69□□□□□ -1.98
Scaf1Q5U4C3 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Scaf1Q5U4C3 Mir410-201ENSMUST00000083563 81 ntBASIC2.69□□□□□ -1.98
Scaf1Q5U4C3 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Scaf1Q5U4C3 Gm37778-201ENSMUST00000191732 190 ntBASIC2.67□□□□□ -1.98
Scaf1Q5U4C3 Gm15654-201ENSMUST00000152660 300 ntBASIC2.66□□□□□ -1.98
Scaf1Q5U4C3 Gm22083-201ENSMUST00000157586 102 ntBASIC2.66□□□□□ -1.98
Scaf1Q5U4C3 Gm25460-201ENSMUST00000157954 127 ntBASIC2.66□□□□□ -1.98
Scaf1Q5U4C3 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.66□□□□□ -1.98
Scaf1Q5U4C3 AC122769.2-201ENSMUST00000227248 302 ntBASIC2.66□□□□□ -1.98
Scaf1Q5U4C3 Gm24468-201ENSMUST00000104489 104 ntBASIC2.65□□□□□ -1.99
Scaf1Q5U4C3 Gm44384-201ENSMUST00000200208 114 ntBASIC2.65□□□□□ -1.99
Scaf1Q5U4C3 Gm42935-201ENSMUST00000202004 151 ntBASIC2.65□□□□□ -1.99
Scaf1Q5U4C3 Gm22082-201ENSMUST00000157587 161 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 190.9 ms