Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Mir6928-201ENSMUST00000185166 70 ntBASIC0.26□□□□□ -2.37
Trav6-3Q5R1E6 Gm37997-201ENSMUST00000193515 267 ntBASIC0.26□□□□□ -2.37
Trav6-3Q5R1E6 Gm22576-201ENSMUST00000083733 104 ntBASIC0.26□□□□□ -2.37
Trav6-3Q5R1E6 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Trav6-3Q5R1E6 Mir466b-8-201ENSMUST00000103883 86 ntBASIC0.25□□□□□ -2.37
Trav6-3Q5R1E6 Gm22469-201ENSMUST00000104118 133 ntBASIC0.25□□□□□ -2.37
Trav6-3Q5R1E6 Mir1899-201ENSMUST00000122798 96 ntBASIC0.25□□□□□ -2.37
Trav6-3Q5R1E6 Gm26152-201ENSMUST00000157427 101 ntBASIC0.25□□□□□ -2.37
Trav6-3Q5R1E6 Gm22612-201ENSMUST00000158293 101 ntBASIC0.25□□□□□ -2.37
Trav6-3Q5R1E6 Gm25834-201ENSMUST00000158916 101 ntBASIC0.25□□□□□ -2.37
Trav6-3Q5R1E6 Gm23340-201ENSMUST00000158955 123 ntBASIC0.25□□□□□ -2.37
Trav6-3Q5R1E6 Gm25300-201ENSMUST00000175284 84 ntBASIC0.25□□□□□ -2.37
Trav6-3Q5R1E6 Mir7010-201ENSMUST00000183464 63 ntBASIC0.25□□□□□ -2.37
Trav6-3Q5R1E6 Mir466e-201ENSMUST00000198862 84 ntBASIC0.25□□□□□ -2.37
Trav6-3Q5R1E6 Mir466c-1-201ENSMUST00000200654 84 ntBASIC0.25□□□□□ -2.37
Trav6-3Q5R1E6 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.25□□□□□ -2.37
Trav6-3Q5R1E6 Gm25141-201ENSMUST00000083177 107 ntBASIC0.25□□□□□ -2.37
Trav6-3Q5R1E6 Mir201-201ENSMUST00000083470 66 ntBASIC0.25□□□□□ -2.37
Trav6-3Q5R1E6 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.25□□□□□ -2.37
Trav6-3Q5R1E6 Gm24132-201ENSMUST00000104745 91 ntBASIC0.24□□□□□ -2.37
Trav6-3Q5R1E6 Mir669g-201ENSMUST00000116809 123 ntBASIC0.24□□□□□ -2.37
Trav6-3Q5R1E6 Gm14838-201ENSMUST00000118913 248 ntBASIC0.24□□□□□ -2.37
Trav6-3Q5R1E6 Gm27579-201ENSMUST00000158113 63 ntBASIC0.24□□□□□ -2.37
Trav6-3Q5R1E6 Gm22565-201ENSMUST00000175540 69 ntBASIC0.24□□□□□ -2.37
Trav6-3Q5R1E6 Gm23977-201ENSMUST00000177871 74 ntBASIC0.24□□□□□ -2.37
Trav6-3Q5R1E6 Snord60-201ENSMUST00000082834 78 ntBASIC0.24□□□□□ -2.37
Trav6-3Q5R1E6 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Trav6-3Q5R1E6 Scarna9-201ENSMUST00000104318 70 ntBASIC0.23□□□□□ -2.37
Trav6-3Q5R1E6 Gm23772-201ENSMUST00000104433 102 ntBASIC0.23□□□□□ -2.37
Trav6-3Q5R1E6 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.23□□□□□ -2.37
Trav6-3Q5R1E6 Gm26116-201ENSMUST00000175600 77 ntBASIC0.23□□□□□ -2.37
Trav6-3Q5R1E6 Gm37330-201ENSMUST00000192606 153 ntBASIC0.23□□□□□ -2.37
Trav6-3Q5R1E6 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.23□□□□□ -2.37
Trav6-3Q5R1E6 Gm44828-201ENSMUST00000203745 106 ntBASIC0.23□□□□□ -2.37
Trav6-3Q5R1E6 Gm43944-201ENSMUST00000205220 120 ntBASIC0.23□□□□□ -2.37
Trav6-3Q5R1E6 Gm45541-201ENSMUST00000210443 54 ntBASIC0.23□□□□□ -2.37
Trav6-3Q5R1E6 Mir410-201ENSMUST00000083563 81 ntBASIC0.23□□□□□ -2.37
Trav6-3Q5R1E6 Gm23881-201ENSMUST00000116872 66 ntBASIC0.22□□□□□ -2.37
Trav6-3Q5R1E6 Gm22079-201ENSMUST00000157592 106 ntBASIC0.22□□□□□ -2.37
Trav6-3Q5R1E6 Gm22983-201ENSMUST00000158308 104 ntBASIC0.22□□□□□ -2.37
Trav6-3Q5R1E6 Gm23917-201ENSMUST00000175256 98 ntBASIC0.22□□□□□ -2.37
Trav6-3Q5R1E6 Gm27993-201ENSMUST00000184362 85 ntBASIC0.22□□□□□ -2.37
Trav6-3Q5R1E6 Gm37586-201ENSMUST00000193654 204 ntBASIC0.22□□□□□ -2.37
Trav6-3Q5R1E6 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
Trav6-3Q5R1E6 Gm44807-201ENSMUST00000206115 154 ntBASIC0.22□□□□□ -2.37
Trav6-3Q5R1E6 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Trav6-3Q5R1E6 Gm23969-201ENSMUST00000083324 74 ntBASIC0.22□□□□□ -2.37
Trav6-3Q5R1E6 Mir377-201ENSMUST00000083504 68 ntBASIC0.22□□□□□ -2.37
Trav6-3Q5R1E6 Gm15654-201ENSMUST00000152660 300 ntBASIC0.21□□□□□ -2.38
Trav6-3Q5R1E6 Gm23080-201ENSMUST00000157846 103 ntBASIC0.21□□□□□ -2.38
Trav6-3Q5R1E6 Gm22520-201ENSMUST00000158269 129 ntBASIC0.21□□□□□ -2.38
Trav6-3Q5R1E6 Gm10548-202ENSMUST00000165672 272 ntBASIC0.21□□□□□ -2.38
Trav6-3Q5R1E6 Gm37116-201ENSMUST00000195161 147 ntBASIC0.21□□□□□ -2.38
Trav6-3Q5R1E6 Gm44409-201ENSMUST00000198810 166 ntBASIC0.21□□□□□ -2.38
Trav6-3Q5R1E6 Gm3702-201ENSMUST00000211754 346 ntBASIC0.21□□□□□ -2.38
Trav6-3Q5R1E6 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.21□□□□□ -2.38
Trav6-3Q5R1E6 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.21□□□□□ -2.38
Trav6-3Q5R1E6 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.21□□□□□ -2.38
Trav6-3Q5R1E6 Mir448-201ENSMUST00000083516 112 ntBASIC0.21□□□□□ -2.38
Trav6-3Q5R1E6 Gm22003-201ENSMUST00000101885 107 ntBASIC0.2□□□□□ -2.38
Trav6-3Q5R1E6 Mir100-201ENSMUST00000175270 80 ntBASIC0.2□□□□□ -2.38
Trav6-3Q5R1E6 Gm23410-201ENSMUST00000179967 107 ntBASIC0.2□□□□□ -2.38
Trav6-3Q5R1E6 Gm22756-201ENSMUST00000180118 107 ntBASIC0.2□□□□□ -2.38
Trav6-3Q5R1E6 Gm27475-201ENSMUST00000183420 61 ntBASIC0.2□□□□□ -2.38
Trav6-3Q5R1E6 Gm27402-201ENSMUST00000183890 120 ntBASIC0.2□□□□□ -2.38
Trav6-3Q5R1E6 Mir7065-201ENSMUST00000185110 61 ntBASIC0.2□□□□□ -2.38
Trav6-3Q5R1E6 Mir721-201ENSMUST00000200230 88 ntBASIC0.2□□□□□ -2.38
Trav6-3Q5R1E6 Gm5002-201ENSMUST00000207145 223 ntBASIC0.2□□□□□ -2.38
Trav6-3Q5R1E6 Gm22505-201ENSMUST00000082956 108 ntBASIC0.2□□□□□ -2.38
Trav6-3Q5R1E6 Gm22363-201ENSMUST00000083100 108 ntBASIC0.2□□□□□ -2.38
Trav6-3Q5R1E6 Gm23814-201ENSMUST00000083230 102 ntBASIC0.2□□□□□ -2.38
Trav6-3Q5R1E6 Gm23095-201ENSMUST00000083446 107 ntBASIC0.2□□□□□ -2.38
Trav6-3Q5R1E6 Gm24238-201ENSMUST00000157792 98 ntBASIC0.19□□□□□ -2.38
Trav6-3Q5R1E6 Gm22946-201ENSMUST00000158558 82 ntBASIC0.19□□□□□ -2.38
Trav6-3Q5R1E6 Gm25976-201ENSMUST00000158695 130 ntBASIC0.19□□□□□ -2.38
Trav6-3Q5R1E6 Gm22476-201ENSMUST00000158902 100 ntBASIC0.19□□□□□ -2.38
Trav6-3Q5R1E6 Gm16550-201ENSMUST00000162550 126 ntBASIC0.19□□□□□ -2.38
Trav6-3Q5R1E6 Gm20409-201ENSMUST00000173457 130 ntBASIC0.19□□□□□ -2.38
Trav6-3Q5R1E6 Gm22239-201ENSMUST00000175220 103 ntBASIC0.19□□□□□ -2.38
Trav6-3Q5R1E6 Mir30f-201ENSMUST00000196073 92 ntBASIC0.19□□□□□ -2.38
Trav6-3Q5R1E6 Snord82-201ENSMUST00000082889 70 ntBASIC0.19□□□□□ -2.38
Trav6-3Q5R1E6 Mir670-201ENSMUST00000102380 100 ntBASIC0.18□□□□□ -2.38
Trav6-3Q5R1E6 Gm14626-201ENSMUST00000117619 216 ntBASIC0.18□□□□□ -2.38
Trav6-3Q5R1E6 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.18□□□□□ -2.38
Trav6-3Q5R1E6 Gm23901-201ENSMUST00000157570 107 ntBASIC0.18□□□□□ -2.38
Trav6-3Q5R1E6 Gm26158-201ENSMUST00000158973 119 ntBASIC0.18□□□□□ -2.38
Trav6-3Q5R1E6 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.18□□□□□ -2.38
Trav6-3Q5R1E6 Gm24575-201ENSMUST00000175502 77 ntBASIC0.18□□□□□ -2.38
Trav6-3Q5R1E6 Gm26285-201ENSMUST00000177923 107 ntBASIC0.18□□□□□ -2.38
Trav6-3Q5R1E6 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.18□□□□□ -2.38
Trav6-3Q5R1E6 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.18□□□□□ -2.38
Trav6-3Q5R1E6 Gm23622-201ENSMUST00000082460 107 ntBASIC0.18□□□□□ -2.38
Trav6-3Q5R1E6 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
Trav6-3Q5R1E6 Gm22673-201ENSMUST00000104415 131 ntBASIC0.17□□□□□ -2.38
Trav6-3Q5R1E6 Gm26156-201ENSMUST00000116999 123 ntBASIC0.17□□□□□ -2.38
Trav6-3Q5R1E6 Gm23857-201ENSMUST00000158379 111 ntBASIC0.17□□□□□ -2.38
Trav6-3Q5R1E6 Gm27934-201ENSMUST00000158795 63 ntBASIC0.17□□□□□ -2.38
Trav6-3Q5R1E6 Gm25820-201ENSMUST00000198589 127 ntBASIC0.17□□□□□ -2.38
Trav6-3Q5R1E6 Gm23301-201ENSMUST00000082713 65 ntBASIC0.17□□□□□ -2.38
Trav6-3Q5R1E6 Mir200a-201ENSMUST00000083466 90 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 184.4 ms