Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.67□□□□□ -2.3
Trim40Q3UWA4 DQ267101-201ENSMUST00000082562 73 ntBASIC0.67□□□□□ -2.3
Trim40Q3UWA4 Mir362-201ENSMUST00000093592 65 ntBASIC0.67□□□□□ -2.3
Trim40Q3UWA4 Gm24232-201ENSMUST00000104314 132 ntBASIC0.66□□□□□ -2.3
Trim40Q3UWA4 Gm25377-201ENSMUST00000104334 129 ntBASIC0.66□□□□□ -2.3
Trim40Q3UWA4 Gm22606-201ENSMUST00000158290 103 ntBASIC0.66□□□□□ -2.3
Trim40Q3UWA4 Gm26225-201ENSMUST00000082508 135 ntBASIC0.66□□□□□ -2.3
Trim40Q3UWA4 Snord47-201ENSMUST00000083034 77 ntBASIC0.66□□□□□ -2.3
Trim40Q3UWA4 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Trim40Q3UWA4 Gm22786-201ENSMUST00000104086 122 ntBASIC0.65□□□□□ -2.31
Trim40Q3UWA4 Gm14502-201ENSMUST00000118154 113 ntBASIC0.65□□□□□ -2.31
Trim40Q3UWA4 Gm22796-201ENSMUST00000157234 106 ntBASIC0.65□□□□□ -2.31
Trim40Q3UWA4 Gm23328-201ENSMUST00000157418 132 ntBASIC0.65□□□□□ -2.31
Trim40Q3UWA4 Gm24728-201ENSMUST00000158226 125 ntBASIC0.65□□□□□ -2.31
Trim40Q3UWA4 Gm23859-201ENSMUST00000158383 64 ntBASIC0.65□□□□□ -2.31
Trim40Q3UWA4 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.65□□□□□ -2.31
Trim40Q3UWA4 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Trim40Q3UWA4 Gm22169-201ENSMUST00000083229 107 ntBASIC0.65□□□□□ -2.31
Trim40Q3UWA4 Gm22337-201ENSMUST00000157721 132 ntBASIC0.64□□□□□ -2.31
Trim40Q3UWA4 Gm22967-201ENSMUST00000157956 239 ntBASIC0.64□□□□□ -2.31
Trim40Q3UWA4 Gm24678-201ENSMUST00000158756 104 ntBASIC0.64□□□□□ -2.31
Trim40Q3UWA4 Gm17020-201ENSMUST00000172274 274 ntBASIC0.64□□□□□ -2.31
Trim40Q3UWA4 Mir6364-201ENSMUST00000183396 86 ntBASIC0.64□□□□□ -2.31
Trim40Q3UWA4 Gm43911-201ENSMUST00000203097 76 ntBASIC0.64□□□□□ -2.31
Trim40Q3UWA4 Gm5002-201ENSMUST00000207145 223 ntBASIC0.64□□□□□ -2.31
Trim40Q3UWA4 Gm23766-201ENSMUST00000103894 80 ntBASIC0.63□□□□□ -2.31
Trim40Q3UWA4 Gm24579-201ENSMUST00000103964 144 ntBASIC0.63□□□□□ -2.31
Trim40Q3UWA4 Mir467g-201ENSMUST00000116906 120 ntBASIC0.63□□□□□ -2.31
Trim40Q3UWA4 Gm14039-201ENSMUST00000118705 101 ntBASIC0.63□□□□□ -2.31
Trim40Q3UWA4 Gm23760-201ENSMUST00000158350 116 ntBASIC0.63□□□□□ -2.31
Trim40Q3UWA4 Gm24131-201ENSMUST00000158539 107 ntBASIC0.63□□□□□ -2.31
Trim40Q3UWA4 Gm16550-201ENSMUST00000162550 126 ntBASIC0.63□□□□□ -2.31
Trim40Q3UWA4 Mir6369-201ENSMUST00000183772 106 ntBASIC0.63□□□□□ -2.31
Trim40Q3UWA4 Gm28435-201ENSMUST00000185496 108 ntBASIC0.63□□□□□ -2.31
Trim40Q3UWA4 Gm18665-201ENSMUST00000189783 270 ntBASIC0.63□□□□□ -2.31
Trim40Q3UWA4 Gm44488-201ENSMUST00000199467 119 ntBASIC0.63□□□□□ -2.31
Trim40Q3UWA4 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.63□□□□□ -2.31
Trim40Q3UWA4 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Trim40Q3UWA4 Snord61-201ENSMUST00000083176 71 ntBASIC0.63□□□□□ -2.31
Trim40Q3UWA4 Mir30a-201ENSMUST00000083471 71 ntBASIC0.63□□□□□ -2.31
Trim40Q3UWA4 Mir196b-201ENSMUST00000083509 85 ntBASIC0.63□□□□□ -2.31
Trim40Q3UWA4 Gm25410-201ENSMUST00000083758 137 ntBASIC0.63□□□□□ -2.31
Trim40Q3UWA4 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Trim40Q3UWA4 Gm23203-201ENSMUST00000104374 107 ntBASIC0.62□□□□□ -2.31
Trim40Q3UWA4 Gm24238-201ENSMUST00000157792 98 ntBASIC0.62□□□□□ -2.31
Trim40Q3UWA4 Gm25715-201ENSMUST00000158627 125 ntBASIC0.62□□□□□ -2.31
Trim40Q3UWA4 Mir6390-201ENSMUST00000184405 129 ntBASIC0.62□□□□□ -2.31
Trim40Q3UWA4 Mir7059-201ENSMUST00000184825 59 ntBASIC0.62□□□□□ -2.31
Trim40Q3UWA4 Mir7118-201ENSMUST00000197760 61 ntBASIC0.62□□□□□ -2.31
Trim40Q3UWA4 Gm25138-201ENSMUST00000083248 136 ntBASIC0.62□□□□□ -2.31
Trim40Q3UWA4 Mir216a-201ENSMUST00000083605 72 ntBASIC0.62□□□□□ -2.31
Trim40Q3UWA4 Snord33-201ENSMUST00000083694 84 ntBASIC0.62□□□□□ -2.31
Trim40Q3UWA4 Snord69-201ENSMUST00000104024 80 ntBASIC0.61□□□□□ -2.31
Trim40Q3UWA4 Gm24374-201ENSMUST00000104394 106 ntBASIC0.61□□□□□ -2.31
Trim40Q3UWA4 Gm6272-201ENSMUST00000121256 171 ntBASIC0.61□□□□□ -2.31
Trim40Q3UWA4 Gm24476-201ENSMUST00000157437 131 ntBASIC0.61□□□□□ -2.31
Trim40Q3UWA4 Gm25599-201ENSMUST00000157816 103 ntBASIC0.61□□□□□ -2.31
Trim40Q3UWA4 Gm23853-201ENSMUST00000158375 104 ntBASIC0.61□□□□□ -2.31
Trim40Q3UWA4 Gm25444-201ENSMUST00000158999 113 ntBASIC0.61□□□□□ -2.31
Trim40Q3UWA4 Gm27792-201ENSMUST00000184031 115 ntBASIC0.61□□□□□ -2.31
Trim40Q3UWA4 Gm28767-201ENSMUST00000188601 114 ntBASIC0.61□□□□□ -2.31
Trim40Q3UWA4 Gm44807-201ENSMUST00000206115 154 ntBASIC0.61□□□□□ -2.31
Trim40Q3UWA4 AL929417.1-201ENSMUST00000214901 124 ntBASIC0.61□□□□□ -2.31
Trim40Q3UWA4 Mir101a-201ENSMUST00000083517 83 ntBASIC0.61□□□□□ -2.31
Trim40Q3UWA4 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Trim40Q3UWA4 Gm22105-201ENSMUST00000116734 116 ntBASIC0.6□□□□□ -2.31
Trim40Q3UWA4 Gm15654-201ENSMUST00000152660 300 ntBASIC0.6□□□□□ -2.31
Trim40Q3UWA4 Gm24750-201ENSMUST00000157843 104 ntBASIC0.6□□□□□ -2.31
Trim40Q3UWA4 Gm27446-201ENSMUST00000183963 89 ntBASIC0.6□□□□□ -2.31
Trim40Q3UWA4 Gm44338-201ENSMUST00000198614 110 ntBASIC0.6□□□□□ -2.31
Trim40Q3UWA4 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.6□□□□□ -2.31
Trim40Q3UWA4 Gm24527-201ENSMUST00000082920 107 ntBASIC0.6□□□□□ -2.31
Trim40Q3UWA4 Gm22973-201ENSMUST00000083298 191 ntBASIC0.6□□□□□ -2.31
Trim40Q3UWA4 Gm24030-201ENSMUST00000083931 164 ntBASIC0.6□□□□□ -2.31
Trim40Q3UWA4 Gm25610-201ENSMUST00000104016 129 ntBASIC0.59□□□□□ -2.31
Trim40Q3UWA4 Scarna9-201ENSMUST00000104318 70 ntBASIC0.59□□□□□ -2.31
Trim40Q3UWA4 Gm25980-201ENSMUST00000157176 218 ntBASIC0.59□□□□□ -2.31
Trim40Q3UWA4 Gm24549-201ENSMUST00000158647 139 ntBASIC0.59□□□□□ -2.31
Trim40Q3UWA4 Gm22139-201ENSMUST00000158747 105 ntBASIC0.59□□□□□ -2.31
Trim40Q3UWA4 Gm20409-201ENSMUST00000173457 130 ntBASIC0.59□□□□□ -2.31
Trim40Q3UWA4 Gm22466-201ENSMUST00000175278 69 ntBASIC0.59□□□□□ -2.31
Trim40Q3UWA4 Mir30f-201ENSMUST00000196073 92 ntBASIC0.59□□□□□ -2.31
Trim40Q3UWA4 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.59□□□□□ -2.31
Trim40Q3UWA4 Gm44211-201ENSMUST00000204867 145 ntBASIC0.59□□□□□ -2.31
Trim40Q3UWA4 AC159885.1-201ENSMUST00000222221 199 ntBASIC0.59□□□□□ -2.31
Trim40Q3UWA4 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.58□□□□□ -2.32
Trim40Q3UWA4 Gm25506-201ENSMUST00000104339 70 ntBASIC0.58□□□□□ -2.32
Trim40Q3UWA4 Gm23990-201ENSMUST00000117031 117 ntBASIC0.58□□□□□ -2.32
Trim40Q3UWA4 Gm24500-201ENSMUST00000158447 124 ntBASIC0.58□□□□□ -2.32
Trim40Q3UWA4 Gm24054-201ENSMUST00000158619 105 ntBASIC0.58□□□□□ -2.32
Trim40Q3UWA4 Gm25716-201ENSMUST00000158628 104 ntBASIC0.58□□□□□ -2.32
Trim40Q3UWA4 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.58□□□□□ -2.32
Trim40Q3UWA4 Gm24575-201ENSMUST00000175502 77 ntBASIC0.58□□□□□ -2.32
Trim40Q3UWA4 Mir6240-201ENSMUST00000184281 117 ntBASIC0.58□□□□□ -2.32
Trim40Q3UWA4 Mir3969-201ENSMUST00000197106 92 ntBASIC0.58□□□□□ -2.32
Trim40Q3UWA4 Gm43944-201ENSMUST00000205220 120 ntBASIC0.58□□□□□ -2.32
Trim40Q3UWA4 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.58□□□□□ -2.32
Trim40Q3UWA4 Gm25136-201ENSMUST00000083253 115 ntBASIC0.58□□□□□ -2.32
Trim40Q3UWA4 Gm44489-201ENSMUST00000104619 97 ntBASIC0.57□□□□□ -2.32
Trim40Q3UWA4 Mir1966-201ENSMUST00000158807 108 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 151.2 ms