Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gm24937-201ENSMUST00000122597 134 ntBASIC2.63□□□□□ -1.99
Gm28047Q3US59 Gm22666-201ENSMUST00000158717 164 ntBASIC2.63□□□□□ -1.99
Gm28047Q3US59 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Gm28047Q3US59 Gm45522-201ENSMUST00000210784 166 ntBASIC2.63□□□□□ -1.99
Gm28047Q3US59 AC159093.2-201ENSMUST00000227881 297 ntBASIC2.63□□□□□ -1.99
Gm28047Q3US59 Gm23249-201ENSMUST00000083369 161 ntBASIC2.63□□□□□ -1.99
Gm28047Q3US59 Gm24927-201ENSMUST00000083397 107 ntBASIC2.63□□□□□ -1.99
Gm28047Q3US59 Gm23344-201ENSMUST00000083818 68 ntBASIC2.63□□□□□ -1.99
Gm28047Q3US59 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.62□□□□□ -1.99
Gm28047Q3US59 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Gm28047Q3US59 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.62□□□□□ -1.99
Gm28047Q3US59 Gm23858-201ENSMUST00000158384 106 ntBASIC2.62□□□□□ -1.99
Gm28047Q3US59 Gm24573-201ENSMUST00000175499 112 ntBASIC2.62□□□□□ -1.99
Gm28047Q3US59 Gm26398-201ENSMUST00000179015 127 ntBASIC2.62□□□□□ -1.99
Gm28047Q3US59 Gm26139-201ENSMUST00000180098 107 ntBASIC2.62□□□□□ -1.99
Gm28047Q3US59 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.62□□□□□ -1.99
Gm28047Q3US59 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC2.62□□□□□ -1.99
Gm28047Q3US59 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Gm28047Q3US59 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.61□□□□□ -1.99
Gm28047Q3US59 Gm25611-201ENSMUST00000104017 133 ntBASIC2.61□□□□□ -1.99
Gm28047Q3US59 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.61□□□□□ -1.99
Gm28047Q3US59 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.61□□□□□ -1.99
Gm28047Q3US59 Gm23649-201ENSMUST00000179007 107 ntBASIC2.61□□□□□ -1.99
Gm28047Q3US59 Mir378a-201ENSMUST00000198300 66 ntBASIC2.61□□□□□ -1.99
Gm28047Q3US59 Snora33-201ENSMUST00000093556 129 ntBASIC2.61□□□□□ -1.99
Gm28047Q3US59 Mir494-201ENSMUST00000093632 85 ntBASIC2.61□□□□□ -1.99
Gm28047Q3US59 Gm24632-201ENSMUST00000122770 323 ntBASIC2.6□□□□□ -1.99
Gm28047Q3US59 Gm25888-201ENSMUST00000157778 302 ntBASIC2.6□□□□□ -1.99
Gm28047Q3US59 Gm24345-201ENSMUST00000158706 124 ntBASIC2.6□□□□□ -1.99
Gm28047Q3US59 Gm22401-201ENSMUST00000174927 117 ntBASIC2.6□□□□□ -1.99
Gm28047Q3US59 Gm44482-201ENSMUST00000199232 103 ntBASIC2.6□□□□□ -1.99
Gm28047Q3US59 Gm42935-201ENSMUST00000202004 151 ntBASIC2.6□□□□□ -1.99
Gm28047Q3US59 Gm45544-201ENSMUST00000211130 88 ntBASIC2.6□□□□□ -1.99
Gm28047Q3US59 Gm23299-201ENSMUST00000082708 79 ntBASIC2.6□□□□□ -1.99
Gm28047Q3US59 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Gm28047Q3US59 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Gm28047Q3US59 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Gm28047Q3US59 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Gm28047Q3US59 Gm24274-201ENSMUST00000116787 124 ntBASIC2.59□□□□□ -1.99
Gm28047Q3US59 Gm12941-201ENSMUST00000117934 220 ntBASIC2.59□□□□□ -1.99
Gm28047Q3US59 Gm26073-201ENSMUST00000179906 127 ntBASIC2.59□□□□□ -1.99
Gm28047Q3US59 Mir6905-201ENSMUST00000184228 70 ntBASIC2.59□□□□□ -1.99
Gm28047Q3US59 Mir7232-201ENSMUST00000197929 74 ntBASIC2.59□□□□□ -1.99
Gm28047Q3US59 Mir34a-201ENSMUST00000083559 102 ntBASIC2.59□□□□□ -1.99
Gm28047Q3US59 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.59□□□□□ -2
Gm28047Q3US59 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Gm28047Q3US59 Mir374b-201ENSMUST00000102314 95 ntBASIC2.58□□□□□ -2
Gm28047Q3US59 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Gm28047Q3US59 Gm16355-201ENSMUST00000128606 231 ntBASIC2.58□□□□□ -2
Gm28047Q3US59 Gm22083-201ENSMUST00000157586 102 ntBASIC2.58□□□□□ -2
Gm28047Q3US59 Gm24769-201ENSMUST00000158506 129 ntBASIC2.58□□□□□ -2
Gm28047Q3US59 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.58□□□□□ -2
Gm28047Q3US59 Gm25618-201ENSMUST00000179484 107 ntBASIC2.58□□□□□ -2
Gm28047Q3US59 Gm27419-201ENSMUST00000184576 109 ntBASIC2.58□□□□□ -2
Gm28047Q3US59 Gm44325-201ENSMUST00000196757 77 ntBASIC2.58□□□□□ -2
Gm28047Q3US59 Gm26379-202ENSMUST00000200225 132 ntBASIC2.58□□□□□ -2
Gm28047Q3US59 Gm43038-201ENSMUST00000202359 88 ntBASIC2.58□□□□□ -2
Gm28047Q3US59 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.58□□□□□ -2
Gm28047Q3US59 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Gm28047Q3US59 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.58□□□□□ -2
Gm28047Q3US59 Gm16510-201ENSMUST00000153501 249 ntBASIC2.57□□□□□ -2
Gm28047Q3US59 Gm22279-201ENSMUST00000157200 93 ntBASIC2.57□□□□□ -2
Gm28047Q3US59 Gm22517-201ENSMUST00000158265 136 ntBASIC2.57□□□□□ -2
Gm28047Q3US59 Gm23005-201ENSMUST00000158950 136 ntBASIC2.57□□□□□ -2
Gm28047Q3US59 Mir3075-201ENSMUST00000175340 85 ntBASIC2.57□□□□□ -2
Gm28047Q3US59 Gm44807-201ENSMUST00000206115 154 ntBASIC2.57□□□□□ -2
Gm28047Q3US59 Gm23246-201ENSMUST00000083371 67 ntBASIC2.57□□□□□ -2
Gm28047Q3US59 Mir127-201ENSMUST00000093568 70 ntBASIC2.57□□□□□ -2
Gm28047Q3US59 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.57□□□□□ -2
Gm28047Q3US59 Gm44560-201ENSMUST00000207816 3115 ntBASIC2.57□□□□□ -2
Gm28047Q3US59 Gm25756-201ENSMUST00000103990 136 ntBASIC2.56□□□□□ -2
Gm28047Q3US59 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.56□□□□□ -2
Gm28047Q3US59 Gm23170-201ENSMUST00000157158 106 ntBASIC2.56□□□□□ -2
Gm28047Q3US59 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.55□□□□□ -2
Gm28047Q3US59 Gm24221-201ENSMUST00000158833 313 ntBASIC2.55□□□□□ -2
Gm28047Q3US59 Gm16584-201ENSMUST00000159267 189 ntBASIC2.55□□□□□ -2
Gm28047Q3US59 Gm22413-201ENSMUST00000175465 85 ntBASIC2.55□□□□□ -2
Gm28047Q3US59 Gm24698-201ENSMUST00000083883 130 ntBASIC2.55□□□□□ -2
Gm28047Q3US59 Mir297-1-201ENSMUST00000103800 76 ntBASIC2.54□□□□□ -2
Gm28047Q3US59 Gm23889-201ENSMUST00000122689 104 ntBASIC2.54□□□□□ -2
Gm28047Q3US59 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Gm28047Q3US59 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Gm28047Q3US59 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Gm28047Q3US59 Gm26259-201ENSMUST00000104778 97 ntBASIC2.53□□□□□ -2
Gm28047Q3US59 Gm25529-201ENSMUST00000104850 92 ntBASIC2.53□□□□□ -2
Gm28047Q3US59 Gm25884-201ENSMUST00000157782 62 ntBASIC2.53□□□□□ -2
Gm28047Q3US59 Gm24399-201ENSMUST00000157869 74 ntBASIC2.53□□□□□ -2
Gm28047Q3US59 Gm22099-201ENSMUST00000157925 123 ntBASIC2.53□□□□□ -2
Gm28047Q3US59 Gm24900-201ENSMUST00000158128 134 ntBASIC2.53□□□□□ -2
Gm28047Q3US59 Gm27959-201ENSMUST00000185172 111 ntBASIC2.53□□□□□ -2
Gm28047Q3US59 Gm44491-201ENSMUST00000196794 96 ntBASIC2.53□□□□□ -2
Gm28047Q3US59 Mir6925-201ENSMUST00000197857 70 ntBASIC2.53□□□□□ -2
Gm28047Q3US59 Mir7215-201ENSMUST00000200383 51 ntBASIC2.53□□□□□ -2
Gm28047Q3US59 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
Gm28047Q3US59 Gm24049-201ENSMUST00000102409 100 ntBASIC2.52□□□□□ -2.01
Gm28047Q3US59 Gm24075-201ENSMUST00000158175 72 ntBASIC2.52□□□□□ -2.01
Gm28047Q3US59 Gm25488-201ENSMUST00000158728 118 ntBASIC2.52□□□□□ -2.01
Gm28047Q3US59 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Gm28047Q3US59 Snora20-201ENSMUST00000082703 128 ntBASIC2.52□□□□□ -2.01
Gm28047Q3US59 Gm25642-201ENSMUST00000175137 66 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 131.4 ms