Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Gm25611-201ENSMUST00000104017 133 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm25110-201ENSMUST00000116684 121 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm25775-201ENSMUST00000116716 121 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm24795-201ENSMUST00000116737 121 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm25171-201ENSMUST00000116926 121 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm24640-201ENSMUST00000116949 126 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm22626-201ENSMUST00000116990 126 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm22612-201ENSMUST00000158293 101 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm26360-201ENSMUST00000158872 103 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm24761-201ENSMUST00000179589 127 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm24488-201ENSMUST00000179934 127 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm25701-201ENSMUST00000179988 127 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm26431-201ENSMUST00000180199 127 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm37586-201ENSMUST00000193654 204 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm42795-201ENSMUST00000198847 76 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm8508-201ENSMUST00000061226 363 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm26204-201ENSMUST00000082906 107 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm22576-201ENSMUST00000083733 104 ntBASIC0.46□□□□□ -2.34
Ctdnep1Q3TP92 Gm23838-201ENSMUST00000158067 162 ntBASIC0.45□□□□□ -2.34
Ctdnep1Q3TP92 Gm22332-201ENSMUST00000158072 126 ntBASIC0.45□□□□□ -2.34
Ctdnep1Q3TP92 Gm22946-201ENSMUST00000158558 82 ntBASIC0.45□□□□□ -2.34
Ctdnep1Q3TP92 Gm24547-201ENSMUST00000158649 149 ntBASIC0.45□□□□□ -2.34
Ctdnep1Q3TP92 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Ctdnep1Q3TP92 Mir721-201ENSMUST00000200230 88 ntBASIC0.45□□□□□ -2.34
Ctdnep1Q3TP92 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
Ctdnep1Q3TP92 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.45□□□□□ -2.34
Ctdnep1Q3TP92 Gm25138-201ENSMUST00000083248 136 ntBASIC0.45□□□□□ -2.34
Ctdnep1Q3TP92 Gm24342-201ENSMUST00000103907 104 ntBASIC0.44□□□□□ -2.34
Ctdnep1Q3TP92 Gm23321-201ENSMUST00000104465 126 ntBASIC0.44□□□□□ -2.34
Ctdnep1Q3TP92 Gm22796-201ENSMUST00000157234 106 ntBASIC0.44□□□□□ -2.34
Ctdnep1Q3TP92 Gm25769-201ENSMUST00000158569 127 ntBASIC0.44□□□□□ -2.34
Ctdnep1Q3TP92 Gm22259-201ENSMUST00000178926 107 ntBASIC0.44□□□□□ -2.34
Ctdnep1Q3TP92 Gm27289-201ENSMUST00000183341 82 ntBASIC0.44□□□□□ -2.34
Ctdnep1Q3TP92 Mir6928-201ENSMUST00000185166 70 ntBASIC0.44□□□□□ -2.34
Ctdnep1Q3TP92 Mir411-201ENSMUST00000083543 82 ntBASIC0.44□□□□□ -2.34
Ctdnep1Q3TP92 Snord69-201ENSMUST00000104024 80 ntBASIC0.43□□□□□ -2.34
Ctdnep1Q3TP92 Gm25378-201ENSMUST00000104333 129 ntBASIC0.43□□□□□ -2.34
Ctdnep1Q3TP92 Gm26274-201ENSMUST00000157103 321 ntBASIC0.43□□□□□ -2.34
Ctdnep1Q3TP92 Gm24476-201ENSMUST00000157437 131 ntBASIC0.43□□□□□ -2.34
Ctdnep1Q3TP92 Gm22522-201ENSMUST00000158271 151 ntBASIC0.43□□□□□ -2.34
Ctdnep1Q3TP92 Gm22476-201ENSMUST00000158902 100 ntBASIC0.43□□□□□ -2.34
Ctdnep1Q3TP92 Mir6369-201ENSMUST00000183772 106 ntBASIC0.43□□□□□ -2.34
Ctdnep1Q3TP92 Gm27285-201ENSMUST00000183875 127 ntBASIC0.43□□□□□ -2.34
Ctdnep1Q3TP92 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Ctdnep1Q3TP92 Gm8219-201ENSMUST00000218309 242 ntBASIC0.43□□□□□ -2.34
Ctdnep1Q3TP92 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.43□□□□□ -2.34
Ctdnep1Q3TP92 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.43□□□□□ -2.34
Ctdnep1Q3TP92 Gm23969-201ENSMUST00000083324 74 ntBASIC0.43□□□□□ -2.34
Ctdnep1Q3TP92 Mir201-201ENSMUST00000083470 66 ntBASIC0.43□□□□□ -2.34
Ctdnep1Q3TP92 Gm24030-201ENSMUST00000083931 164 ntBASIC0.43□□□□□ -2.34
Ctdnep1Q3TP92 Mir489-201ENSMUST00000093599 107 ntBASIC0.43□□□□□ -2.34
Ctdnep1Q3TP92 Gm24590-201ENSMUST00000116699 119 ntBASIC0.42□□□□□ -2.34
Ctdnep1Q3TP92 Gm25985-201ENSMUST00000122677 107 ntBASIC0.42□□□□□ -2.34
Ctdnep1Q3TP92 Gm22079-201ENSMUST00000157592 106 ntBASIC0.42□□□□□ -2.34
Ctdnep1Q3TP92 Gm24728-201ENSMUST00000158226 125 ntBASIC0.42□□□□□ -2.34
Ctdnep1Q3TP92 Gm16546-201ENSMUST00000159442 355 ntBASIC0.42□□□□□ -2.34
Ctdnep1Q3TP92 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.42□□□□□ -2.34
Ctdnep1Q3TP92 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.42□□□□□ -2.34
Ctdnep1Q3TP92 Gm44828-201ENSMUST00000203745 106 ntBASIC0.42□□□□□ -2.34
Ctdnep1Q3TP92 Gm44211-201ENSMUST00000204867 145 ntBASIC0.42□□□□□ -2.34
Ctdnep1Q3TP92 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.42□□□□□ -2.34
Ctdnep1Q3TP92 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.41□□□□□ -2.34
Ctdnep1Q3TP92 Gm14039-201ENSMUST00000118705 101 ntBASIC0.41□□□□□ -2.34
Ctdnep1Q3TP92 Gm6272-201ENSMUST00000121256 171 ntBASIC0.41□□□□□ -2.34
Ctdnep1Q3TP92 Gm22999-201ENSMUST00000157082 88 ntBASIC0.41□□□□□ -2.34
Ctdnep1Q3TP92 Gm23080-201ENSMUST00000157846 103 ntBASIC0.41□□□□□ -2.34
Ctdnep1Q3TP92 Gm23853-201ENSMUST00000158375 104 ntBASIC0.41□□□□□ -2.34
Ctdnep1Q3TP92 Gm25653-201ENSMUST00000158473 138 ntBASIC0.41□□□□□ -2.34
Ctdnep1Q3TP92 Gm26285-201ENSMUST00000177923 107 ntBASIC0.41□□□□□ -2.34
Ctdnep1Q3TP92 Mir21b-201ENSMUST00000184317 108 ntBASIC0.41□□□□□ -2.34
Ctdnep1Q3TP92 Gm42623-201ENSMUST00000197225 379 ntBASIC0.41□□□□□ -2.34
Ctdnep1Q3TP92 Gm23622-201ENSMUST00000082460 107 ntBASIC0.41□□□□□ -2.34
Ctdnep1Q3TP92 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.41□□□□□ -2.34
Ctdnep1Q3TP92 Mir302d-201ENSMUST00000083513 66 ntBASIC0.41□□□□□ -2.34
Ctdnep1Q3TP92 Mir101a-201ENSMUST00000083517 83 ntBASIC0.41□□□□□ -2.34
Ctdnep1Q3TP92 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.41□□□□□ -2.34
Ctdnep1Q3TP92 Gm27694-201ENSMUST00000184740 86 ntBASIC0.4□□□□□ -2.35
Ctdnep1Q3TP92 Gm37997-201ENSMUST00000193515 267 ntBASIC0.4□□□□□ -2.35
Ctdnep1Q3TP92 Gm37116-201ENSMUST00000195161 147 ntBASIC0.4□□□□□ -2.35
Ctdnep1Q3TP92 Mir488-201ENSMUST00000093595 109 ntBASIC0.4□□□□□ -2.35
Ctdnep1Q3TP92 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.4□□□□□ -2.35
Ctdnep1Q3TP92 Scarna9-201ENSMUST00000104318 70 ntBASIC0.39□□□□□ -2.35
Ctdnep1Q3TP92 Gm26484-201ENSMUST00000158018 106 ntBASIC0.39□□□□□ -2.35
Ctdnep1Q3TP92 Gm25364-201ENSMUST00000158851 107 ntBASIC0.39□□□□□ -2.35
Ctdnep1Q3TP92 Mir6390-201ENSMUST00000184405 129 ntBASIC0.39□□□□□ -2.35
Ctdnep1Q3TP92 Snord80-202ENSMUST00000199023 77 ntBASIC0.39□□□□□ -2.35
Ctdnep1Q3TP92 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.39□□□□□ -2.35
Ctdnep1Q3TP92 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.39□□□□□ -2.35
Ctdnep1Q3TP92 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.39□□□□□ -2.35
Ctdnep1Q3TP92 Gm22753-201ENSMUST00000083657 107 ntBASIC0.39□□□□□ -2.35
Ctdnep1Q3TP92 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
Ctdnep1Q3TP92 Gm22148-201ENSMUST00000104445 107 ntBASIC0.38□□□□□ -2.35
Ctdnep1Q3TP92 Gm25444-201ENSMUST00000158999 113 ntBASIC0.38□□□□□ -2.35
Ctdnep1Q3TP92 Gm23416-201ENSMUST00000175520 95 ntBASIC0.38□□□□□ -2.35
Ctdnep1Q3TP92 Gm27465-201ENSMUST00000184290 91 ntBASIC0.38□□□□□ -2.35
Ctdnep1Q3TP92 Gm23461-201ENSMUST00000083265 107 ntBASIC0.38□□□□□ -2.35
Ctdnep1Q3TP92 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Ctdnep1Q3TP92 Gm15289-201ENSMUST00000117793 244 ntBASIC0.37□□□□□ -2.35
Ctdnep1Q3TP92 Gm14946-201ENSMUST00000119859 296 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 130.4 ms