Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm37116-201ENSMUST00000195161 147 ntBASIC1.17□□□□□ -2.22
NcanP55066 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.17□□□□□ -2.22
NcanP55066 AC168880.2-201ENSMUST00000224488 201 ntBASIC1.17□□□□□ -2.22
NcanP55066 Gm24494-201ENSMUST00000083804 81 ntBASIC1.17□□□□□ -2.22
NcanP55066 Gm22785-201ENSMUST00000104087 132 ntBASIC1.16□□□□□ -2.22
NcanP55066 Gm25878-201ENSMUST00000104327 93 ntBASIC1.16□□□□□ -2.22
NcanP55066 Gm23772-201ENSMUST00000104433 102 ntBASIC1.16□□□□□ -2.22
NcanP55066 Gm22790-201ENSMUST00000157229 129 ntBASIC1.16□□□□□ -2.22
NcanP55066 Gm23106-201ENSMUST00000157554 101 ntBASIC1.16□□□□□ -2.22
NcanP55066 Gm24345-201ENSMUST00000158706 124 ntBASIC1.16□□□□□ -2.22
NcanP55066 Gm23339-201ENSMUST00000158962 139 ntBASIC1.16□□□□□ -2.22
NcanP55066 Gm22802-201ENSMUST00000175621 89 ntBASIC1.16□□□□□ -2.22
NcanP55066 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.16□□□□□ -2.22
NcanP55066 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.16□□□□□ -2.22
NcanP55066 Gm45544-201ENSMUST00000211130 88 ntBASIC1.16□□□□□ -2.22
NcanP55066 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.16□□□□□ -2.22
NcanP55066 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.16□□□□□ -2.22
NcanP55066 AC165138.1-201ENSMUST00000226984 270 ntBASIC1.16□□□□□ -2.22
NcanP55066 Gm23678-201ENSMUST00000083157 107 ntBASIC1.16□□□□□ -2.22
NcanP55066 Gm23245-201ENSMUST00000083370 135 ntBASIC1.16□□□□□ -2.22
NcanP55066 Mir22-201ENSMUST00000083595 95 ntBASIC1.16□□□□□ -2.22
NcanP55066 Gm14567-201ENSMUST00000117155 174 ntBASIC1.15□□□□□ -2.23
NcanP55066 Gm25663-201ENSMUST00000157698 135 ntBASIC1.15□□□□□ -2.23
NcanP55066 Gm22944-201ENSMUST00000158662 133 ntBASIC1.15□□□□□ -2.23
NcanP55066 Gm22139-201ENSMUST00000158747 105 ntBASIC1.15□□□□□ -2.23
NcanP55066 Gm23337-201ENSMUST00000158959 118 ntBASIC1.15□□□□□ -2.23
NcanP55066 Gm20391-201ENSMUST00000174722 106 ntBASIC1.15□□□□□ -2.23
NcanP55066 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC1.15□□□□□ -2.23
NcanP55066 Gm26073-201ENSMUST00000179906 127 ntBASIC1.15□□□□□ -2.23
NcanP55066 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
NcanP55066 Gm25136-201ENSMUST00000083253 115 ntBASIC1.15□□□□□ -2.23
NcanP55066 Gm22387-201ENSMUST00000158191 131 ntBASIC1.14□□□□□ -2.23
NcanP55066 Gm24323-201ENSMUST00000175342 77 ntBASIC1.14□□□□□ -2.23
NcanP55066 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.14□□□□□ -2.23
NcanP55066 Gm18213-201ENSMUST00000207850 178 ntBASIC1.14□□□□□ -2.23
NcanP55066 Gm18502-201ENSMUST00000218679 199 ntBASIC1.14□□□□□ -2.23
NcanP55066 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.14□□□□□ -2.23
NcanP55066 AC151902.2-201ENSMUST00000226419 301 ntBASIC1.14□□□□□ -2.23
NcanP55066 Gm22283-201ENSMUST00000082556 161 ntBASIC1.14□□□□□ -2.23
NcanP55066 Gm22738-201ENSMUST00000083440 147 ntBASIC1.14□□□□□ -2.23
NcanP55066 Mir201-201ENSMUST00000083470 66 ntBASIC1.14□□□□□ -2.23
NcanP55066 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC1.14□□□□□ -2.23
NcanP55066 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
NcanP55066 Gm24263-201ENSMUST00000104059 107 ntBASIC1.13□□□□□ -2.23
NcanP55066 Gm22373-201ENSMUST00000104584 89 ntBASIC1.13□□□□□ -2.23
NcanP55066 Gm25980-201ENSMUST00000157176 218 ntBASIC1.13□□□□□ -2.23
NcanP55066 Gm22663-201ENSMUST00000158721 102 ntBASIC1.13□□□□□ -2.23
NcanP55066 Gm16399-201ENSMUST00000181423 219 ntBASIC1.13□□□□□ -2.23
NcanP55066 Gm27419-201ENSMUST00000184576 109 ntBASIC1.13□□□□□ -2.23
NcanP55066 Gm25588-201ENSMUST00000082501 140 ntBASIC1.13□□□□□ -2.23
NcanP55066 Snord61-201ENSMUST00000083176 71 ntBASIC1.13□□□□□ -2.23
NcanP55066 Gm24588-201ENSMUST00000116696 83 ntBASIC1.12□□□□□ -2.23
NcanP55066 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.12□□□□□ -2.23
NcanP55066 Gm22946-201ENSMUST00000158558 82 ntBASIC1.12□□□□□ -2.23
NcanP55066 Gm27934-201ENSMUST00000158795 63 ntBASIC1.12□□□□□ -2.23
NcanP55066 Gm25071-201ENSMUST00000175232 70 ntBASIC1.12□□□□□ -2.23
NcanP55066 Gm23567-201ENSMUST00000178005 107 ntBASIC1.12□□□□□ -2.23
NcanP55066 Gm27974-201ENSMUST00000183415 105 ntBASIC1.12□□□□□ -2.23
NcanP55066 Gm43944-201ENSMUST00000205220 120 ntBASIC1.12□□□□□ -2.23
NcanP55066 Gm44976-201ENSMUST00000205543 261 ntBASIC1.12□□□□□ -2.23
NcanP55066 Gm25650-201ENSMUST00000083784 162 ntBASIC1.12□□□□□ -2.23
NcanP55066 Mir489-201ENSMUST00000093599 107 ntBASIC1.12□□□□□ -2.23
NcanP55066 Gm23320-201ENSMUST00000104462 127 ntBASIC1.11□□□□□ -2.23
NcanP55066 Mir1197-201ENSMUST00000117037 120 ntBASIC1.11□□□□□ -2.23
NcanP55066 Gm22485-201ENSMUST00000157990 109 ntBASIC1.11□□□□□ -2.23
NcanP55066 Gm45471-201ENSMUST00000211270 281 ntBASIC1.11□□□□□ -2.23
NcanP55066 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.11□□□□□ -2.23
NcanP55066 Gm24865-201ENSMUST00000103246 96 ntBASIC1.1□□□□□ -2.23
NcanP55066 Gm24232-201ENSMUST00000104314 132 ntBASIC1.1□□□□□ -2.23
NcanP55066 Gm26089-201ENSMUST00000157898 107 ntBASIC1.1□□□□□ -2.23
NcanP55066 Gm25771-201ENSMUST00000158565 144 ntBASIC1.1□□□□□ -2.23
NcanP55066 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.1□□□□□ -2.23
NcanP55066 Gm23947-201ENSMUST00000093636 107 ntBASIC1.1□□□□□ -2.23
NcanP55066 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
NcanP55066 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
NcanP55066 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
NcanP55066 Gm25428-201ENSMUST00000157608 114 ntBASIC1.09□□□□□ -2.23
NcanP55066 Gm25949-201ENSMUST00000175333 114 ntBASIC1.09□□□□□ -2.23
NcanP55066 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.09□□□□□ -2.23
NcanP55066 Gm26326-201ENSMUST00000083070 129 ntBASIC1.09□□□□□ -2.23
NcanP55066 Mir196a-2-201ENSMUST00000083554 85 ntBASIC1.09□□□□□ -2.23
NcanP55066 Mir669b-201ENSMUST00000102172 97 ntBASIC1.08□□□□□ -2.24
NcanP55066 Gm23350-201ENSMUST00000158429 103 ntBASIC1.08□□□□□ -2.24
NcanP55066 Gm43381-201ENSMUST00000198553 165 ntBASIC1.08□□□□□ -2.24
NcanP55066 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC1.08□□□□□ -2.24
NcanP55066 Gm22980-201ENSMUST00000082608 70 ntBASIC1.08□□□□□ -2.24
NcanP55066 Snora20-201ENSMUST00000082703 128 ntBASIC1.08□□□□□ -2.24
NcanP55066 Snord90-201ENSMUST00000104568 111 ntBASIC1.07□□□□□ -2.24
NcanP55066 Gm26285-201ENSMUST00000177923 107 ntBASIC1.07□□□□□ -2.24
NcanP55066 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
NcanP55066 Gm44470-201ENSMUST00000203913 142 ntBASIC1.07□□□□□ -2.24
NcanP55066 Gm44859-201ENSMUST00000207831 94 ntBASIC1.07□□□□□ -2.24
NcanP55066 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.07□□□□□ -2.24
NcanP55066 Gm23622-201ENSMUST00000082460 107 ntBASIC1.07□□□□□ -2.24
NcanP55066 Gm26224-201ENSMUST00000082506 80 ntBASIC1.07□□□□□ -2.24
NcanP55066 Gm10172-201ENSMUST00000085929 558 ntBASIC1.07□□□□□ -2.24
NcanP55066 Mir451a-201ENSMUST00000093557 72 ntBASIC1.07□□□□□ -2.24
NcanP55066 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
NcanP55066 Gm26420-201ENSMUST00000104273 103 ntBASIC1.06□□□□□ -2.24
NcanP55066 Mir654-201ENSMUST00000104787 84 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms