Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm24151-201ENSMUST00000082758 141 ntBASIC2.26□□□□□ -2.05
Rfx1P48377 Snord1a-201ENSMUST00000083160 74 ntBASIC2.26□□□□□ -2.05
Rfx1P48377 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.26□□□□□ -2.05
Rfx1P48377 Gm25889-201ENSMUST00000157775 107 ntBASIC2.25□□□□□ -2.05
Rfx1P48377 Gm22551-201ENSMUST00000157795 103 ntBASIC2.25□□□□□ -2.05
Rfx1P48377 Gm22727-201ENSMUST00000158090 116 ntBASIC2.25□□□□□ -2.05
Rfx1P48377 Mir322-201ENSMUST00000083484 95 ntBASIC2.25□□□□□ -2.05
Rfx1P48377 Gm24098-201ENSMUST00000102075 109 ntBASIC2.24□□□□□ -2.05
Rfx1P48377 Gm25381-201ENSMUST00000102078 109 ntBASIC2.24□□□□□ -2.05
Rfx1P48377 Gm25978-201ENSMUST00000158698 90 ntBASIC2.24□□□□□ -2.05
Rfx1P48377 Gm16550-201ENSMUST00000162550 126 ntBASIC2.24□□□□□ -2.05
Rfx1P48377 Gm22070-201ENSMUST00000178475 107 ntBASIC2.24□□□□□ -2.05
Rfx1P48377 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Rfx1P48377 Gm25094-201ENSMUST00000103992 131 ntBASIC2.23□□□□□ -2.05
Rfx1P48377 Gm6444-201ENSMUST00000119611 458 ntBASIC2.23□□□□□ -2.05
Rfx1P48377 Gm12086-201ENSMUST00000120863 228 ntBASIC2.23□□□□□ -2.05
Rfx1P48377 Gm23644-201ENSMUST00000157856 77 ntBASIC2.23□□□□□ -2.05
Rfx1P48377 Mir6406-201ENSMUST00000183592 120 ntBASIC2.23□□□□□ -2.05
Rfx1P48377 Mir6997-201ENSMUST00000184313 71 ntBASIC2.23□□□□□ -2.05
Rfx1P48377 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.22□□□□□ -2.05
Rfx1P48377 Gm25402-201ENSMUST00000082966 131 ntBASIC2.22□□□□□ -2.05
Rfx1P48377 Mir6995-201ENSMUST00000183658 71 ntBASIC2.21□□□□□ -2.06
Rfx1P48377 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.21□□□□□ -2.06
Rfx1P48377 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.21□□□□□ -2.06
Rfx1P48377 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Rfx1P48377 Gm22490-201ENSMUST00000157188 119 ntBASIC2.2□□□□□ -2.06
Rfx1P48377 Traj61-201ENSMUST00000165025 72 ntBASIC2.2□□□□□ -2.06
Rfx1P48377 Mir6901-201ENSMUST00000185062 62 ntBASIC2.2□□□□□ -2.06
Rfx1P48377 Gm44308-201ENSMUST00000197080 99 ntBASIC2.2□□□□□ -2.06
Rfx1P48377 Gm44384-201ENSMUST00000200208 114 ntBASIC2.2□□□□□ -2.06
Rfx1P48377 Gm14923-201ENSMUST00000118270 155 ntBASIC2.19□□□□□ -2.06
Rfx1P48377 Gm22803-201ENSMUST00000158049 283 ntBASIC2.19□□□□□ -2.06
Rfx1P48377 Gm23197-201ENSMUST00000158809 112 ntBASIC2.19□□□□□ -2.06
Rfx1P48377 Gm22914-201ENSMUST00000175195 77 ntBASIC2.19□□□□□ -2.06
Rfx1P48377 Gm22802-201ENSMUST00000175621 89 ntBASIC2.19□□□□□ -2.06
Rfx1P48377 Gm27365-201ENSMUST00000184041 177 ntBASIC2.19□□□□□ -2.06
Rfx1P48377 Gm28862-201ENSMUST00000188246 163 ntBASIC2.19□□□□□ -2.06
Rfx1P48377 Gm45429-201ENSMUST00000209527 172 ntBASIC2.19□□□□□ -2.06
Rfx1P48377 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Rfx1P48377 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Rfx1P48377 Gm23469-201ENSMUST00000157131 104 ntBASIC2.18□□□□□ -2.06
Rfx1P48377 Gm26038-201ENSMUST00000158151 106 ntBASIC2.18□□□□□ -2.06
Rfx1P48377 Gm22638-201ENSMUST00000179674 107 ntBASIC2.18□□□□□ -2.06
Rfx1P48377 Gm28270-201ENSMUST00000188550 109 ntBASIC2.18□□□□□ -2.06
Rfx1P48377 Gm28328-201ENSMUST00000188869 109 ntBASIC2.18□□□□□ -2.06
Rfx1P48377 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.18□□□□□ -2.06
Rfx1P48377 Gm12941-201ENSMUST00000117934 220 ntBASIC2.17□□□□□ -2.06
Rfx1P48377 Gm23670-201ENSMUST00000157469 119 ntBASIC2.17□□□□□ -2.06
Rfx1P48377 Gm23106-201ENSMUST00000157554 101 ntBASIC2.17□□□□□ -2.06
Rfx1P48377 Gm25329-201ENSMUST00000158041 126 ntBASIC2.17□□□□□ -2.06
Rfx1P48377 Gm43512-201ENSMUST00000198495 176 ntBASIC2.17□□□□□ -2.06
Rfx1P48377 Gm25820-201ENSMUST00000198589 127 ntBASIC2.17□□□□□ -2.06
Rfx1P48377 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Rfx1P48377 Gm24509-201ENSMUST00000157086 101 ntBASIC2.16□□□□□ -2.06
Rfx1P48377 Gm25358-201ENSMUST00000157189 101 ntBASIC2.16□□□□□ -2.06
Rfx1P48377 Gm22082-201ENSMUST00000157587 161 ntBASIC2.16□□□□□ -2.06
Rfx1P48377 Gm24783-201ENSMUST00000157639 100 ntBASIC2.16□□□□□ -2.06
Rfx1P48377 Gm24177-201ENSMUST00000158927 131 ntBASIC2.16□□□□□ -2.06
Rfx1P48377 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Rfx1P48377 Gm23766-201ENSMUST00000103894 80 ntBASIC2.15□□□□□ -2.07
Rfx1P48377 Gm26081-201ENSMUST00000104068 132 ntBASIC2.15□□□□□ -2.07
Rfx1P48377 Gm22772-201ENSMUST00000104451 121 ntBASIC2.15□□□□□ -2.07
Rfx1P48377 n-R5s63-201ENSMUST00000122756 103 ntBASIC2.15□□□□□ -2.07
Rfx1P48377 Gm15654-201ENSMUST00000152660 300 ntBASIC2.15□□□□□ -2.07
Rfx1P48377 Gm23838-201ENSMUST00000158067 162 ntBASIC2.15□□□□□ -2.07
Rfx1P48377 Gm22164-201ENSMUST00000158413 106 ntBASIC2.15□□□□□ -2.07
Rfx1P48377 Gm37778-201ENSMUST00000191732 190 ntBASIC2.15□□□□□ -2.07
Rfx1P48377 Gm42935-201ENSMUST00000202004 151 ntBASIC2.15□□□□□ -2.07
Rfx1P48377 Gm23507-201ENSMUST00000083078 107 ntBASIC2.15□□□□□ -2.07
Rfx1P48377 Gm24494-201ENSMUST00000083804 81 ntBASIC2.15□□□□□ -2.07
Rfx1P48377 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Rfx1P48377 Gm25380-201ENSMUST00000175463 107 ntBASIC2.14□□□□□ -2.07
Rfx1P48377 Gm24641-201ENSMUST00000178055 107 ntBASIC2.14□□□□□ -2.07
Rfx1P48377 Gm25484-201ENSMUST00000178217 107 ntBASIC2.14□□□□□ -2.07
Rfx1P48377 Gm26138-201ENSMUST00000179236 107 ntBASIC2.14□□□□□ -2.07
Rfx1P48377 Gm22821-201ENSMUST00000179288 107 ntBASIC2.14□□□□□ -2.07
Rfx1P48377 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.14□□□□□ -2.07
Rfx1P48377 Mir7017-201ENSMUST00000184894 62 ntBASIC2.14□□□□□ -2.07
Rfx1P48377 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.14□□□□□ -2.07
Rfx1P48377 Gm23140-201ENSMUST00000082487 107 ntBASIC2.14□□□□□ -2.07
Rfx1P48377 Gm23298-201ENSMUST00000083181 107 ntBASIC2.14□□□□□ -2.07
Rfx1P48377 Gm24614-201ENSMUST00000083269 107 ntBASIC2.14□□□□□ -2.07
Rfx1P48377 Gm22057-201ENSMUST00000083387 107 ntBASIC2.14□□□□□ -2.07
Rfx1P48377 Mir92-2-201ENSMUST00000083679 91 ntBASIC2.14□□□□□ -2.07
Rfx1P48377 Gm25516-201ENSMUST00000083857 107 ntBASIC2.14□□□□□ -2.07
Rfx1P48377 Gm22004-201ENSMUST00000101884 107 ntBASIC2.13□□□□□ -2.07
Rfx1P48377 Gm11248-201ENSMUST00000119568 201 ntBASIC2.13□□□□□ -2.07
Rfx1P48377 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.13□□□□□ -2.07
Rfx1P48377 U6.1-201ENSMUST00000157443 101 ntBASIC2.13□□□□□ -2.07
Rfx1P48377 Gm24401-201ENSMUST00000157868 91 ntBASIC2.13□□□□□ -2.07
Rfx1P48377 Gm43324-201ENSMUST00000197482 289 ntBASIC2.13□□□□□ -2.07
Rfx1P48377 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.13□□□□□ -2.07
Rfx1P48377 Gm25650-201ENSMUST00000083784 162 ntBASIC2.13□□□□□ -2.07
Rfx1P48377 Snora2b-201ENSMUST00000084005 137 ntBASIC2.13□□□□□ -2.07
Rfx1P48377 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Rfx1P48377 Gm25068-201ENSMUST00000103895 110 ntBASIC2.12□□□□□ -2.07
Rfx1P48377 Gm25544-201ENSMUST00000122676 120 ntBASIC2.12□□□□□ -2.07
Rfx1P48377 Gm27511-201ENSMUST00000183502 127 ntBASIC2.12□□□□□ -2.07
Rfx1P48377 Gm22887-201ENSMUST00000178586 107 ntBASIC2.11□□□□□ -2.07
Rfx1P48377 AC122769.2-201ENSMUST00000227248 302 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 169 ms