Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Mir466b-8-201ENSMUST00000103883 86 ntBASIC0.56□□□□□ -2.32
Traf1P39428 Gm6985-201ENSMUST00000121255 271 ntBASIC0.56□□□□□ -2.32
Traf1P39428 Gm25223-201ENSMUST00000158200 110 ntBASIC0.56□□□□□ -2.32
Traf1P39428 Gm24729-201ENSMUST00000158225 137 ntBASIC0.56□□□□□ -2.32
Traf1P39428 Gm24500-201ENSMUST00000158447 124 ntBASIC0.56□□□□□ -2.32
Traf1P39428 Gm24549-201ENSMUST00000158647 139 ntBASIC0.56□□□□□ -2.32
Traf1P39428 Mir466e-201ENSMUST00000198862 84 ntBASIC0.56□□□□□ -2.32
Traf1P39428 Mir466c-1-201ENSMUST00000200654 84 ntBASIC0.56□□□□□ -2.32
Traf1P39428 Gm45002-201ENSMUST00000208045 120 ntBASIC0.56□□□□□ -2.32
Traf1P39428 Gm24522-201ENSMUST00000083964 108 ntBASIC0.56□□□□□ -2.32
Traf1P39428 Gm6952-201ENSMUST00000118629 159 ntBASIC0.55□□□□□ -2.32
Traf1P39428 Gm14884-201ENSMUST00000120456 196 ntBASIC0.55□□□□□ -2.32
Traf1P39428 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.55□□□□□ -2.32
Traf1P39428 Gm22466-201ENSMUST00000175278 69 ntBASIC0.55□□□□□ -2.32
Traf1P39428 Mir6389-201ENSMUST00000183661 102 ntBASIC0.55□□□□□ -2.32
Traf1P39428 Gm25814-201ENSMUST00000082754 107 ntBASIC0.55□□□□□ -2.32
Traf1P39428 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.54□□□□□ -2.32
Traf1P39428 Snord69-201ENSMUST00000104024 80 ntBASIC0.54□□□□□ -2.32
Traf1P39428 Gm23545-201ENSMUST00000158205 104 ntBASIC0.54□□□□□ -2.32
Traf1P39428 Gm37586-201ENSMUST00000193654 204 ntBASIC0.54□□□□□ -2.32
Traf1P39428 Gm25588-201ENSMUST00000082501 140 ntBASIC0.54□□□□□ -2.32
Traf1P39428 Gm25482-201ENSMUST00000083225 107 ntBASIC0.54□□□□□ -2.32
Traf1P39428 Mir186-201ENSMUST00000083497 71 ntBASIC0.54□□□□□ -2.32
Traf1P39428 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.53□□□□□ -2.32
Traf1P39428 Gm23772-201ENSMUST00000104433 102 ntBASIC0.53□□□□□ -2.32
Traf1P39428 Gm23258-201ENSMUST00000158319 106 ntBASIC0.53□□□□□ -2.32
Traf1P39428 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.53□□□□□ -2.32
Traf1P39428 Gm25834-201ENSMUST00000158916 101 ntBASIC0.53□□□□□ -2.32
Traf1P39428 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.53□□□□□ -2.32
Traf1P39428 Mir532-201ENSMUST00000093630 96 ntBASIC0.53□□□□□ -2.32
Traf1P39428 Gm22759-201ENSMUST00000102276 96 ntBASIC0.52□□□□□ -2.33
Traf1P39428 Gm23901-201ENSMUST00000157570 107 ntBASIC0.52□□□□□ -2.33
Traf1P39428 Gm23838-201ENSMUST00000158067 162 ntBASIC0.52□□□□□ -2.33
Traf1P39428 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.52□□□□□ -2.33
Traf1P39428 AC154390.1-201ENSMUST00000225629 277 ntBASIC0.52□□□□□ -2.33
Traf1P39428 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.52□□□□□ -2.33
Traf1P39428 Gm22576-201ENSMUST00000083733 104 ntBASIC0.52□□□□□ -2.33
Traf1P39428 Gm25611-201ENSMUST00000104017 133 ntBASIC0.51□□□□□ -2.33
Traf1P39428 Gm15289-201ENSMUST00000117793 244 ntBASIC0.51□□□□□ -2.33
Traf1P39428 Gm25393-201ENSMUST00000157336 285 ntBASIC0.51□□□□□ -2.33
Traf1P39428 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Traf1P39428 Gm23567-201ENSMUST00000178005 107 ntBASIC0.51□□□□□ -2.33
Traf1P39428 Gm26092-201ENSMUST00000179798 97 ntBASIC0.51□□□□□ -2.33
Traf1P39428 Mir669a-1-201ENSMUST00000180238 97 ntBASIC0.51□□□□□ -2.33
Traf1P39428 Mir7079-201ENSMUST00000184697 69 ntBASIC0.51□□□□□ -2.33
Traf1P39428 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.51□□□□□ -2.33
Traf1P39428 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.51□□□□□ -2.33
Traf1P39428 Gm25364-201ENSMUST00000158851 107 ntBASIC0.5□□□□□ -2.33
Traf1P39428 Gm25787-201ENSMUST00000104709 92 ntBASIC0.49□□□□□ -2.33
Traf1P39428 Gm24132-201ENSMUST00000104745 91 ntBASIC0.49□□□□□ -2.33
Traf1P39428 Gm23672-201ENSMUST00000157471 107 ntBASIC0.49□□□□□ -2.33
Traf1P39428 Gm22332-201ENSMUST00000158072 126 ntBASIC0.49□□□□□ -2.33
Traf1P39428 Gm24728-201ENSMUST00000158226 125 ntBASIC0.49□□□□□ -2.33
Traf1P39428 Gm22946-201ENSMUST00000158558 82 ntBASIC0.49□□□□□ -2.33
Traf1P39428 Mir21b-201ENSMUST00000184317 108 ntBASIC0.49□□□□□ -2.33
Traf1P39428 Mir6390-201ENSMUST00000184405 129 ntBASIC0.49□□□□□ -2.33
Traf1P39428 Gm42795-201ENSMUST00000198847 76 ntBASIC0.49□□□□□ -2.33
Traf1P39428 Gm44828-201ENSMUST00000203745 106 ntBASIC0.49□□□□□ -2.33
Traf1P39428 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
Traf1P39428 Gm26420-201ENSMUST00000104273 103 ntBASIC0.48□□□□□ -2.33
Traf1P39428 Gm24250-201ENSMUST00000157320 135 ntBASIC0.48□□□□□ -2.33
Traf1P39428 Gm24963-201ENSMUST00000157916 144 ntBASIC0.48□□□□□ -2.33
Traf1P39428 Gm23770-201ENSMUST00000178009 108 ntBASIC0.48□□□□□ -2.33
Traf1P39428 Gm22832-201ENSMUST00000178022 108 ntBASIC0.48□□□□□ -2.33
Traf1P39428 Gm23863-201ENSMUST00000178265 108 ntBASIC0.48□□□□□ -2.33
Traf1P39428 Gm24828-201ENSMUST00000178507 108 ntBASIC0.48□□□□□ -2.33
Traf1P39428 Gm23052-201ENSMUST00000178633 108 ntBASIC0.48□□□□□ -2.33
Traf1P39428 Gm25729-201ENSMUST00000179050 108 ntBASIC0.48□□□□□ -2.33
Traf1P39428 Gm25359-201ENSMUST00000179315 108 ntBASIC0.48□□□□□ -2.33
Traf1P39428 Gm22624-201ENSMUST00000179913 108 ntBASIC0.48□□□□□ -2.33
Traf1P39428 Mir219b-201ENSMUST00000198317 65 ntBASIC0.48□□□□□ -2.33
Traf1P39428 Snord82-201ENSMUST00000082889 70 ntBASIC0.48□□□□□ -2.33
Traf1P39428 Gm26204-201ENSMUST00000082906 107 ntBASIC0.48□□□□□ -2.33
Traf1P39428 Gm22738-201ENSMUST00000083440 147 ntBASIC0.48□□□□□ -2.33
Traf1P39428 Gm24835-201ENSMUST00000116777 111 ntBASIC0.47□□□□□ -2.33
Traf1P39428 Gm22850-201ENSMUST00000157714 82 ntBASIC0.47□□□□□ -2.33
Traf1P39428 Gm22557-201ENSMUST00000157804 102 ntBASIC0.47□□□□□ -2.33
Traf1P39428 Gm22612-201ENSMUST00000158293 101 ntBASIC0.47□□□□□ -2.33
Traf1P39428 Gm22259-201ENSMUST00000178926 107 ntBASIC0.47□□□□□ -2.33
Traf1P39428 Mir6369-201ENSMUST00000183772 106 ntBASIC0.47□□□□□ -2.33
Traf1P39428 Gm27694-201ENSMUST00000184740 86 ntBASIC0.47□□□□□ -2.33
Traf1P39428 Mir6928-201ENSMUST00000185166 70 ntBASIC0.47□□□□□ -2.33
Traf1P39428 Gm22753-201ENSMUST00000083657 107 ntBASIC0.47□□□□□ -2.33
Traf1P39428 Gm24030-201ENSMUST00000083931 164 ntBASIC0.47□□□□□ -2.33
Traf1P39428 Gm24640-201ENSMUST00000116949 126 ntBASIC0.46□□□□□ -2.34
Traf1P39428 Gm22626-201ENSMUST00000116990 126 ntBASIC0.46□□□□□ -2.34
Traf1P39428 Gm24476-201ENSMUST00000157437 131 ntBASIC0.46□□□□□ -2.34
Traf1P39428 Gm16546-201ENSMUST00000159442 355 ntBASIC0.46□□□□□ -2.34
Traf1P39428 Gm25300-201ENSMUST00000175284 84 ntBASIC0.46□□□□□ -2.34
Traf1P39428 Gm24761-201ENSMUST00000179589 127 ntBASIC0.46□□□□□ -2.34
Traf1P39428 Gm24488-201ENSMUST00000179934 127 ntBASIC0.46□□□□□ -2.34
Traf1P39428 Gm25701-201ENSMUST00000179988 127 ntBASIC0.46□□□□□ -2.34
Traf1P39428 Gm26431-201ENSMUST00000180199 127 ntBASIC0.46□□□□□ -2.34
Traf1P39428 Gm42623-201ENSMUST00000197225 379 ntBASIC0.46□□□□□ -2.34
Traf1P39428 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.46□□□□□ -2.34
Traf1P39428 Gm23347-201ENSMUST00000083823 82 ntBASIC0.46□□□□□ -2.34
Traf1P39428 Gm24276-201ENSMUST00000102181 110 ntBASIC0.45□□□□□ -2.34
Traf1P39428 Gm23989-201ENSMUST00000117030 66 ntBASIC0.45□□□□□ -2.34
Traf1P39428 Gm22079-201ENSMUST00000157592 106 ntBASIC0.45□□□□□ -2.34
Traf1P39428 Gm23783-201ENSMUST00000157941 102 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 287.8 ms