Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm25112-201ENSMUST00000122680 104 ntBASIC2.4□□□□□ -2.03
RaraP11416 Gm24379-201ENSMUST00000122695 86 ntBASIC2.4□□□□□ -2.03
RaraP11416 Gm23838-201ENSMUST00000158067 162 ntBASIC2.4□□□□□ -2.03
RaraP11416 Gm24698-201ENSMUST00000083883 130 ntBASIC2.4□□□□□ -2.03
RaraP11416 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.4□□□□□ -2.03
RaraP11416 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.4□□□□□ -2.03
RaraP11416 Gm45265-201ENSMUST00000210852 2497 ntBASIC2.39□□□□□ -2.03
RaraP11416 Gm23670-201ENSMUST00000157469 119 ntBASIC2.39□□□□□ -2.03
RaraP11416 Gm23065-201ENSMUST00000158236 130 ntBASIC2.39□□□□□ -2.03
RaraP11416 Gm23375-201ENSMUST00000175407 83 ntBASIC2.39□□□□□ -2.03
RaraP11416 Gm28900-201ENSMUST00000185232 156 ntBASIC2.39□□□□□ -2.03
RaraP11416 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.39□□□□□ -2.03
RaraP11416 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
RaraP11416 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.38□□□□□ -2.03
RaraP11416 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
RaraP11416 Gm22089-201ENSMUST00000158336 102 ntBASIC2.38□□□□□ -2.03
RaraP11416 Gm24880-201ENSMUST00000158776 85 ntBASIC2.38□□□□□ -2.03
RaraP11416 Gm44462-201ENSMUST00000199696 129 ntBASIC2.38□□□□□ -2.03
RaraP11416 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RaraP11416 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
RaraP11416 Gm26425-201ENSMUST00000122529 82 ntBASIC2.37□□□□□ -2.03
RaraP11416 Gm24075-201ENSMUST00000158175 72 ntBASIC2.37□□□□□ -2.03
RaraP11416 Gm22503-201ENSMUST00000158983 115 ntBASIC2.37□□□□□ -2.03
RaraP11416 Mir3086-201ENSMUST00000175072 87 ntBASIC2.37□□□□□ -2.03
RaraP11416 Gm27979-201ENSMUST00000185126 56 ntBASIC2.37□□□□□ -2.03
RaraP11416 Mir497-201ENSMUST00000200557 84 ntBASIC2.37□□□□□ -2.03
RaraP11416 Mir300-201ENSMUST00000083485 79 ntBASIC2.37□□□□□ -2.03
RaraP11416 Snora69-201ENSMUST00000083708 131 ntBASIC2.37□□□□□ -2.03
RaraP11416 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
RaraP11416 Gm44560-201ENSMUST00000207816 3115 ntBASIC2.37□□□□□ -2.03
RaraP11416 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
RaraP11416 Gm23889-201ENSMUST00000122689 104 ntBASIC2.36□□□□□ -2.03
RaraP11416 Gm16328-201ENSMUST00000126985 196 ntBASIC2.36□□□□□ -2.03
RaraP11416 Gm22517-201ENSMUST00000158265 136 ntBASIC2.36□□□□□ -2.03
RaraP11416 Gm25044-201ENSMUST00000158603 104 ntBASIC2.36□□□□□ -2.03
RaraP11416 Gm23005-201ENSMUST00000158950 136 ntBASIC2.36□□□□□ -2.03
RaraP11416 Gm22093-201ENSMUST00000158980 111 ntBASIC2.36□□□□□ -2.03
RaraP11416 Mir6419-201ENSMUST00000184784 113 ntBASIC2.36□□□□□ -2.03
RaraP11416 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.36□□□□□ -2.03
RaraP11416 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.36□□□□□ -2.03
RaraP11416 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
RaraP11416 Gm24274-201ENSMUST00000116787 124 ntBASIC2.35□□□□□ -2.03
RaraP11416 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC2.35□□□□□ -2.03
RaraP11416 Gm25011-201ENSMUST00000158398 126 ntBASIC2.35□□□□□ -2.03
RaraP11416 Gm25949-201ENSMUST00000175333 114 ntBASIC2.35□□□□□ -2.03
RaraP11416 Trbv25-201ENSMUST00000194700 273 ntBASIC2.35□□□□□ -2.03
RaraP11416 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RaraP11416 Gm22672-201ENSMUST00000104414 134 ntBASIC2.34□□□□□ -2.03
RaraP11416 Gm25529-201ENSMUST00000104850 92 ntBASIC2.34□□□□□ -2.03
RaraP11416 Mir466l-201ENSMUST00000104866 121 ntBASIC2.34□□□□□ -2.03
RaraP11416 Gm24900-201ENSMUST00000158128 134 ntBASIC2.34□□□□□ -2.03
RaraP11416 Gm23208-201ENSMUST00000158666 127 ntBASIC2.34□□□□□ -2.03
RaraP11416 Gm16539-201ENSMUST00000160086 327 ntBASIC2.34□□□□□ -2.03
RaraP11416 Gm16550-201ENSMUST00000162550 126 ntBASIC2.34□□□□□ -2.03
RaraP11416 Gm24366-201ENSMUST00000175383 86 ntBASIC2.34□□□□□ -2.03
RaraP11416 Mir5619-201ENSMUST00000176065 61 ntBASIC2.34□□□□□ -2.03
RaraP11416 Gm24801-201ENSMUST00000178503 105 ntBASIC2.34□□□□□ -2.03
RaraP11416 Mir221-201ENSMUST00000083488 95 ntBASIC2.34□□□□□ -2.03
RaraP11416 Gm25337-201ENSMUST00000083723 104 ntBASIC2.34□□□□□ -2.03
RaraP11416 Gm24523-201ENSMUST00000083965 132 ntBASIC2.34□□□□□ -2.03
RaraP11416 Mir1a-1-201ENSMUST00000093635 77 ntBASIC2.34□□□□□ -2.03
RaraP11416 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.34□□□□□ -2.03
RaraP11416 Gm14588-201ENSMUST00000119895 172 ntBASIC2.33□□□□□ -2.04
RaraP11416 Gm23369-201ENSMUST00000175406 105 ntBASIC2.33□□□□□ -2.04
RaraP11416 Gm22264-201ENSMUST00000178200 107 ntBASIC2.33□□□□□ -2.04
RaraP11416 Gm25449-201ENSMUST00000179389 79 ntBASIC2.33□□□□□ -2.04
RaraP11416 Gm27369-201ENSMUST00000185182 71 ntBASIC2.33□□□□□ -2.04
RaraP11416 Snord43-201ENSMUST00000199549 108 ntBASIC2.33□□□□□ -2.04
RaraP11416 Mir151-201ENSMUST00000083678 68 ntBASIC2.33□□□□□ -2.04
RaraP11416 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
RaraP11416 Gm15654-201ENSMUST00000152660 300 ntBASIC2.32□□□□□ -2.04
RaraP11416 Gm26369-201ENSMUST00000157825 100 ntBASIC2.32□□□□□ -2.04
RaraP11416 Mir6925-201ENSMUST00000197857 70 ntBASIC2.32□□□□□ -2.04
RaraP11416 Gm24412-201ENSMUST00000083426 109 ntBASIC2.32□□□□□ -2.04
RaraP11416 Gm22866-201ENSMUST00000083947 177 ntBASIC2.32□□□□□ -2.04
RaraP11416 Mir654-201ENSMUST00000104787 84 ntBASIC2.31□□□□□ -2.04
RaraP11416 Gm23048-201ENSMUST00000157237 129 ntBASIC2.31□□□□□ -2.04
RaraP11416 Gm25994-201ENSMUST00000175392 101 ntBASIC2.31□□□□□ -2.04
RaraP11416 Mir7017-201ENSMUST00000184894 62 ntBASIC2.31□□□□□ -2.04
RaraP11416 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
RaraP11416 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.3□□□□□ -2.04
RaraP11416 Gm15536-201ENSMUST00000121411 114 ntBASIC2.3□□□□□ -2.04
RaraP11416 Mir1949-201ENSMUST00000157434 141 ntBASIC2.3□□□□□ -2.04
RaraP11416 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.3□□□□□ -2.04
RaraP11416 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.3□□□□□ -2.04
RaraP11416 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.3□□□□□ -2.04
RaraP11416 Mir93-201ENSMUST00000083593 88 ntBASIC2.3□□□□□ -2.04
RaraP11416 Mir8119-201ENSMUST00000183371 129 ntBASIC2.29□□□□□ -2.04
RaraP11416 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC2.29□□□□□ -2.04
RaraP11416 AC159093.2-201ENSMUST00000227881 297 ntBASIC2.29□□□□□ -2.04
RaraP11416 Mir30c-2-201ENSMUST00000083633 84 ntBASIC2.29□□□□□ -2.04
RaraP11416 Mir127-201ENSMUST00000093568 70 ntBASIC2.29□□□□□ -2.04
RaraP11416 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.28□□□□□ -2.04
RaraP11416 Gm23551-201ENSMUST00000116852 121 ntBASIC2.28□□□□□ -2.04
RaraP11416 Mir7683-201ENSMUST00000183842 61 ntBASIC2.28□□□□□ -2.04
RaraP11416 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
RaraP11416 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RaraP11416 Gm25382-201ENSMUST00000157811 97 ntBASIC2.27□□□□□ -2.05
RaraP11416 Gm25460-201ENSMUST00000157954 127 ntBASIC2.27□□□□□ -2.05
RaraP11416 Gm23289-201ENSMUST00000175615 108 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms