Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Gm14293-201ENSMUST00000118528 577 ntBASIC-1.09□□□□□ -2.58
DffaO54786 Gm24250-201ENSMUST00000157320 135 ntBASIC-1.09□□□□□ -2.58
DffaO54786 Gm25600-201ENSMUST00000158357 106 ntBASIC-1.09□□□□□ -2.58
DffaO54786 Gm25771-201ENSMUST00000158565 144 ntBASIC-1.09□□□□□ -2.58
DffaO54786 Mir3101-201ENSMUST00000175607 88 ntBASIC-1.09□□□□□ -2.58
DffaO54786 Gm28438-201ENSMUST00000188299 345 ntBASIC-1.09□□□□□ -2.58
DffaO54786 Gm37763-201ENSMUST00000193445 120 ntBASIC-1.09□□□□□ -2.58
DffaO54786 Gm44807-201ENSMUST00000206115 154 ntBASIC-1.09□□□□□ -2.58
DffaO54786 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
DffaO54786 Gm24296-201ENSMUST00000158297 106 ntBASIC-1.1□□□□□ -2.59
DffaO54786 Gm24129-201ENSMUST00000158537 97 ntBASIC-1.1□□□□□ -2.59
DffaO54786 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-1.1□□□□□ -2.59
DffaO54786 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-1.1□□□□□ -2.59
DffaO54786 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-1.1□□□□□ -2.59
DffaO54786 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-1.1□□□□□ -2.59
DffaO54786 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-1.1□□□□□ -2.59
DffaO54786 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-1.1□□□□□ -2.59
DffaO54786 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-1.1□□□□□ -2.59
DffaO54786 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-1.1□□□□□ -2.59
DffaO54786 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-1.1□□□□□ -2.59
DffaO54786 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-1.1□□□□□ -2.59
DffaO54786 Gm9227-201ENSMUST00000194733 566 ntBASIC-1.1□□□□□ -2.59
DffaO54786 Gm44959-201ENSMUST00000209127 231 ntBASIC-1.1□□□□□ -2.59
DffaO54786 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-1.1□□□□□ -2.59
DffaO54786 AC116589.1-201ENSMUST00000220634 327 ntBASIC-1.1□□□□□ -2.59
DffaO54786 Gm24276-201ENSMUST00000102181 110 ntBASIC-1.11□□□□□ -2.59
DffaO54786 n-R5s8-201ENSMUST00000104121 118 ntBASIC-1.11□□□□□ -2.59
DffaO54786 Gm24593-201ENSMUST00000122507 106 ntBASIC-1.11□□□□□ -2.59
DffaO54786 Gm23982-201ENSMUST00000157141 106 ntBASIC-1.11□□□□□ -2.59
DffaO54786 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-1.11□□□□□ -2.59
DffaO54786 Gm42795-201ENSMUST00000198847 76 ntBASIC-1.11□□□□□ -2.59
DffaO54786 AC125190.3-201ENSMUST00000223224 121 ntBASIC-1.11□□□□□ -2.59
DffaO54786 Gm23056-201ENSMUST00000082803 111 ntBASIC-1.11□□□□□ -2.59
DffaO54786 Gm25472-201ENSMUST00000175454 78 ntBASIC-1.12□□□□□ -2.59
DffaO54786 Mir7043-201ENSMUST00000184219 70 ntBASIC-1.12□□□□□ -2.59
DffaO54786 Mir378c-201ENSMUST00000184478 99 ntBASIC-1.12□□□□□ -2.59
DffaO54786 CT030166.3-201ENSMUST00000223203 193 ntBASIC-1.12□□□□□ -2.59
DffaO54786 Gm22791-201ENSMUST00000157232 145 ntBASIC-1.13□□□□□ -2.59
DffaO54786 Gm26007-201ENSMUST00000158798 120 ntBASIC-1.13□□□□□ -2.59
DffaO54786 Gm28849-201ENSMUST00000188127 174 ntBASIC-1.13□□□□□ -2.59
DffaO54786 Gm25142-201ENSMUST00000082698 107 ntBASIC-1.13□□□□□ -2.59
DffaO54786 Gm22097-201ENSMUST00000157929 278 ntBASIC-1.14□□□□□ -2.59
DffaO54786 Gm25615-201ENSMUST00000177836 94 ntBASIC-1.14□□□□□ -2.59
DffaO54786 Gm22450-201ENSMUST00000179641 107 ntBASIC-1.14□□□□□ -2.59
DffaO54786 Gm23379-201ENSMUST00000180026 107 ntBASIC-1.14□□□□□ -2.59
DffaO54786 mt-Tc-201ENSMUST00000082400 66 ntBASIC-1.14□□□□□ -2.59
DffaO54786 Gm23614-201ENSMUST00000082598 107 ntBASIC-1.14□□□□□ -2.59
DffaO54786 Gm24929-201ENSMUST00000083403 139 ntBASIC-1.14□□□□□ -2.59
DffaO54786 Gm26111-201ENSMUST00000083969 106 ntBASIC-1.14□□□□□ -2.59
DffaO54786 Gm13345-201ENSMUST00000121928 228 ntBASIC-1.15□□□□□ -2.59
DffaO54786 Gm16356-201ENSMUST00000143300 169 ntBASIC-1.15□□□□□ -2.59
DffaO54786 Gm26482-201ENSMUST00000158015 62 ntBASIC-1.15□□□□□ -2.59
DffaO54786 Gm7240-201ENSMUST00000220769 664 ntBASIC-1.15□□□□□ -2.59
DffaO54786 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
DffaO54786 Gm12647-201ENSMUST00000118977 265 ntBASIC-1.16□□□□□ -2.6
DffaO54786 Gm14301-201ENSMUST00000120181 324 ntBASIC-1.16□□□□□ -2.6
DffaO54786 Gm28016-201ENSMUST00000184594 196 ntBASIC-1.17□□□□□ -2.6
DffaO54786 Gm43927-201ENSMUST00000204599 117 ntBASIC-1.17□□□□□ -2.6
DffaO54786 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-1.17□□□□□ -2.6
DffaO54786 Gm24204-201ENSMUST00000082950 107 ntBASIC-1.17□□□□□ -2.6
DffaO54786 Mir20b-201ENSMUST00000102087 80 ntBASIC-1.18□□□□□ -2.6
DffaO54786 Gm23253-201ENSMUST00000157441 104 ntBASIC-1.18□□□□□ -2.6
DffaO54786 Gm23640-201ENSMUST00000157860 104 ntBASIC-1.18□□□□□ -2.6
DffaO54786 Mir5124b-201ENSMUST00000184251 85 ntBASIC-1.18□□□□□ -2.6
DffaO54786 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-1.18□□□□□ -2.6
DffaO54786 Trav5-2-201ENSMUST00000199855 280 ntBASIC-1.18□□□□□ -2.6
DffaO54786 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
DffaO54786 Mir1191-201ENSMUST00000116883 120 ntBASIC-1.19□□□□□ -2.6
DffaO54786 Gm14919-201ENSMUST00000120839 390 ntBASIC-1.19□□□□□ -2.6
DffaO54786 Gm26424-201ENSMUST00000122530 104 ntBASIC-1.19□□□□□ -2.6
DffaO54786 Gm25974-201ENSMUST00000158701 94 ntBASIC-1.19□□□□□ -2.6
DffaO54786 Gm27977-201ENSMUST00000185159 111 ntBASIC-1.19□□□□□ -2.6
DffaO54786 Gm14626-201ENSMUST00000117619 216 ntBASIC-1.2□□□□□ -2.6
DffaO54786 Gm13059-201ENSMUST00000119881 398 ntBASIC-1.21□□□□□ -2.6
DffaO54786 Gm24504-201ENSMUST00000157679 100 ntBASIC-1.21□□□□□ -2.6
DffaO54786 Gm24499-201ENSMUST00000158446 104 ntBASIC-1.21□□□□□ -2.6
DffaO54786 Gm26359-201ENSMUST00000158873 101 ntBASIC-1.21□□□□□ -2.6
DffaO54786 Gm27672-201ENSMUST00000183751 204 ntBASIC-1.21□□□□□ -2.6
DffaO54786 Gm5002-201ENSMUST00000207145 223 ntBASIC-1.21□□□□□ -2.6
DffaO54786 Gm26202-201ENSMUST00000082910 65 ntBASIC-1.21□□□□□ -2.6
DffaO54786 AC159896.1-201ENSMUST00000215264 215 ntBASIC-1.22□□□□□ -2.6
DffaO54786 Gm25610-201ENSMUST00000104016 129 ntBASIC-1.23□□□□□ -2.61
DffaO54786 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-1.23□□□□□ -2.61
DffaO54786 Gm12686-201ENSMUST00000120546 397 ntBASIC-1.23□□□□□ -2.61
DffaO54786 Gm23262-201ENSMUST00000158323 168 ntBASIC-1.23□□□□□ -2.61
DffaO54786 Gm22813-202ENSMUST00000200346 124 ntBASIC-1.23□□□□□ -2.61
DffaO54786 Gm22686-201ENSMUST00000082847 100 ntBASIC-1.23□□□□□ -2.61
DffaO54786 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-1.23□□□□□ -2.61
DffaO54786 Gm25875-201ENSMUST00000104323 107 ntBASIC-1.24□□□□□ -2.61
DffaO54786 Gm25848-201ENSMUST00000116790 144 ntBASIC-1.24□□□□□ -2.61
DffaO54786 Gm24648-201ENSMUST00000157111 132 ntBASIC-1.24□□□□□ -2.61
DffaO54786 Gm25769-201ENSMUST00000158569 127 ntBASIC-1.24□□□□□ -2.61
DffaO54786 Gm24810-201ENSMUST00000175317 70 ntBASIC-1.24□□□□□ -2.61
DffaO54786 Gm43381-201ENSMUST00000198553 165 ntBASIC-1.24□□□□□ -2.61
DffaO54786 Gm25081-201ENSMUST00000082534 108 ntBASIC-1.24□□□□□ -2.61
DffaO54786 Gm22827-201ENSMUST00000083766 107 ntBASIC-1.24□□□□□ -2.61
DffaO54786 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-1.25□□□□□ -2.61
DffaO54786 Mir18b-201ENSMUST00000103923 83 ntBASIC-1.25□□□□□ -2.61
DffaO54786 Gm24073-201ENSMUST00000158177 106 ntBASIC-1.25□□□□□ -2.61
DffaO54786 Gm23065-201ENSMUST00000158236 130 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 76,532 protein–RNA pairs in 152.7 ms