Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.51□□□□□ -2.49
Sdc4O35988 Gm22450-201ENSMUST00000179641 107 ntBASIC-0.51□□□□□ -2.49
Sdc4O35988 Gm25473-201ENSMUST00000180191 107 ntBASIC-0.51□□□□□ -2.49
Sdc4O35988 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.51□□□□□ -2.49
Sdc4O35988 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.51□□□□□ -2.49
Sdc4O35988 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.51□□□□□ -2.49
Sdc4O35988 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
Sdc4O35988 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.51□□□□□ -2.49
Sdc4O35988 Gm24856-201ENSMUST00000082809 107 ntBASIC-0.51□□□□□ -2.49
Sdc4O35988 Gm24521-201ENSMUST00000083958 107 ntBASIC-0.51□□□□□ -2.49
Sdc4O35988 Gm12797-201ENSMUST00000118645 273 ntBASIC-0.52□□□□□ -2.49
Sdc4O35988 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.52□□□□□ -2.49
Sdc4O35988 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.52□□□□□ -2.49
Sdc4O35988 Gm26479-201ENSMUST00000122620 106 ntBASIC-0.52□□□□□ -2.49
Sdc4O35988 Gm43624-201ENSMUST00000197368 180 ntBASIC-0.52□□□□□ -2.49
Sdc4O35988 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC-0.52□□□□□ -2.49
Sdc4O35988 Gm25634-201ENSMUST00000082667 105 ntBASIC-0.52□□□□□ -2.49
Sdc4O35988 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.52□□□□□ -2.49
Sdc4O35988 Gm22999-201ENSMUST00000157082 88 ntBASIC-0.53□□□□□ -2.49
Sdc4O35988 Gm22790-201ENSMUST00000157229 129 ntBASIC-0.53□□□□□ -2.49
Sdc4O35988 Gm27723-201ENSMUST00000157398 63 ntBASIC-0.53□□□□□ -2.49
Sdc4O35988 Gm22332-201ENSMUST00000158072 126 ntBASIC-0.53□□□□□ -2.49
Sdc4O35988 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.53□□□□□ -2.49
Sdc4O35988 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.53□□□□□ -2.49
Sdc4O35988 AL935138.1-201ENSMUST00000215309 196 ntBASIC-0.53□□□□□ -2.49
Sdc4O35988 Gm13797-201ENSMUST00000121792 120 ntBASIC-0.54□□□□□ -2.5
Sdc4O35988 Gm25970-201ENSMUST00000157165 86 ntBASIC-0.54□□□□□ -2.5
Sdc4O35988 Gm22815-201ENSMUST00000157451 62 ntBASIC-0.54□□□□□ -2.5
Sdc4O35988 Gm23022-201ENSMUST00000158768 180 ntBASIC-0.54□□□□□ -2.5
Sdc4O35988 Gm23059-201ENSMUST00000158978 107 ntBASIC-0.54□□□□□ -2.5
Sdc4O35988 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.54□□□□□ -2.5
Sdc4O35988 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.54□□□□□ -2.5
Sdc4O35988 Gm22365-201ENSMUST00000093750 117 ntBASIC-0.54□□□□□ -2.5
Sdc4O35988 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.55□□□□□ -2.5
Sdc4O35988 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.55□□□□□ -2.5
Sdc4O35988 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-0.55□□□□□ -2.5
Sdc4O35988 AC154296.2-201ENSMUST00000214696 545 ntBASIC-0.55□□□□□ -2.5
Sdc4O35988 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.55□□□□□ -2.5
Sdc4O35988 Gm22686-201ENSMUST00000082847 100 ntBASIC-0.55□□□□□ -2.5
Sdc4O35988 Gm24867-201ENSMUST00000104161 107 ntBASIC-0.56□□□□□ -2.5
Sdc4O35988 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.56□□□□□ -2.5
Sdc4O35988 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.56□□□□□ -2.5
Sdc4O35988 Gm42622-201ENSMUST00000197229 355 ntBASIC-0.56□□□□□ -2.5
Sdc4O35988 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.56□□□□□ -2.5
Sdc4O35988 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.56□□□□□ -2.5
Sdc4O35988 Snord42a-201ENSMUST00000082606 65 ntBASIC-0.56□□□□□ -2.5
Sdc4O35988 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.57□□□□□ -2.5
Sdc4O35988 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.57□□□□□ -2.5
Sdc4O35988 Gm24501-201ENSMUST00000158452 62 ntBASIC-0.57□□□□□ -2.5
Sdc4O35988 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.57□□□□□ -2.5
Sdc4O35988 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.57□□□□□ -2.5
Sdc4O35988 Gm27672-201ENSMUST00000183751 204 ntBASIC-0.57□□□□□ -2.5
Sdc4O35988 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.57□□□□□ -2.5
Sdc4O35988 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.58□□□□□ -2.5
Sdc4O35988 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.58□□□□□ -2.5
Sdc4O35988 Gm25848-201ENSMUST00000116790 144 ntBASIC-0.58□□□□□ -2.5
Sdc4O35988 Gm14906-201ENSMUST00000119265 390 ntBASIC-0.58□□□□□ -2.5
Sdc4O35988 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.58□□□□□ -2.5
Sdc4O35988 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.58□□□□□ -2.5
Sdc4O35988 Gm25664-201ENSMUST00000157697 107 ntBASIC-0.58□□□□□ -2.5
Sdc4O35988 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.58□□□□□ -2.5
Sdc4O35988 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.58□□□□□ -2.5
Sdc4O35988 Gm25024-201ENSMUST00000179667 104 ntBASIC-0.58□□□□□ -2.5
Sdc4O35988 Gm28008-201ENSMUST00000184021 186 ntBASIC-0.58□□□□□ -2.5
Sdc4O35988 Mir7093-201ENSMUST00000184195 101 ntBASIC-0.58□□□□□ -2.5
Sdc4O35988 Mir6928-201ENSMUST00000185166 70 ntBASIC-0.58□□□□□ -2.5
Sdc4O35988 Gm29665-201ENSMUST00000191457 528 ntBASIC-0.58□□□□□ -2.5
Sdc4O35988 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.58□□□□□ -2.5
Sdc4O35988 CT025603.4-201ENSMUST00000225777 413 ntBASIC-0.58□□□□□ -2.5
Sdc4O35988 Gm25588-201ENSMUST00000082501 140 ntBASIC-0.58□□□□□ -2.5
Sdc4O35988 Gm22032-201ENSMUST00000116946 116 ntBASIC-0.59□□□□□ -2.5
Sdc4O35988 Gm22555-201ENSMUST00000157801 62 ntBASIC-0.59□□□□□ -2.5
Sdc4O35988 Gm24392-201ENSMUST00000158136 103 ntBASIC-0.59□□□□□ -2.5
Sdc4O35988 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.59□□□□□ -2.5
Sdc4O35988 Gm24667-201ENSMUST00000158938 103 ntBASIC-0.59□□□□□ -2.5
Sdc4O35988 n-R5s94-201ENSMUST00000082573 119 ntBASIC-0.59□□□□□ -2.5
Sdc4O35988 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.59□□□□□ -2.5
Sdc4O35988 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.59□□□□□ -2.5
Sdc4O35988 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
Sdc4O35988 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.6□□□□□ -2.51
Sdc4O35988 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.6□□□□□ -2.51
Sdc4O35988 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-0.6□□□□□ -2.51
Sdc4O35988 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.6□□□□□ -2.51
Sdc4O35988 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.6□□□□□ -2.51
Sdc4O35988 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.6□□□□□ -2.51
Sdc4O35988 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.6□□□□□ -2.51
Sdc4O35988 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.6□□□□□ -2.51
Sdc4O35988 Gm22784-201ENSMUST00000104088 132 ntBASIC-0.61□□□□□ -2.51
Sdc4O35988 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-0.61□□□□□ -2.51
Sdc4O35988 Gm37313-201ENSMUST00000191673 290 ntBASIC-0.61□□□□□ -2.51
Sdc4O35988 AC153526.1-201ENSMUST00000219750 190 ntBASIC-0.61□□□□□ -2.51
Sdc4O35988 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
Sdc4O35988 Gm22571-201ENSMUST00000082984 70 ntBASIC-0.61□□□□□ -2.51
Sdc4O35988 Gm24929-201ENSMUST00000083403 139 ntBASIC-0.61□□□□□ -2.51
Sdc4O35988 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.61□□□□□ -2.51
Sdc4O35988 Mir218-1-201ENSMUST00000083669 110 ntBASIC-0.61□□□□□ -2.51
Sdc4O35988 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.62□□□□□ -2.51
Sdc4O35988 Gm14567-201ENSMUST00000117155 174 ntBASIC-0.62□□□□□ -2.51
Sdc4O35988 Gm14919-201ENSMUST00000120839 390 ntBASIC-0.62□□□□□ -2.51
Sdc4O35988 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 222.1 ms