Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm25538-201ENSMUST00000101943 107 ntBASIC-1.02□□□□□ -2.57
Col6a3E9PWQ3 Gm27672-201ENSMUST00000183751 204 ntBASIC-1.02□□□□□ -2.57
Col6a3E9PWQ3 Trav5-2-201ENSMUST00000199855 280 ntBASIC-1.02□□□□□ -2.57
Col6a3E9PWQ3 Gm43907-201ENSMUST00000203128 117 ntBASIC-1.02□□□□□ -2.57
Col6a3E9PWQ3 Gm45543-201ENSMUST00000209327 88 ntBASIC-1.02□□□□□ -2.57
Col6a3E9PWQ3 Platr25-208ENSMUST00000222602 939 ntBASIC-1.02□□□□□ -2.57
Col6a3E9PWQ3 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.02□□□□□ -2.57
Col6a3E9PWQ3 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.02□□□□□ -2.57
Col6a3E9PWQ3 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC-1.02□□□□□ -2.57
Col6a3E9PWQ3 Gm14126-201ENSMUST00000122345 395 ntBASIC-1.02□□□□□ -2.57
Col6a3E9PWQ3 Gm24073-201ENSMUST00000158177 106 ntBASIC-1.02□□□□□ -2.57
Col6a3E9PWQ3 AC124569.1-201ENSMUST00000225932 101 ntBASIC-1.02□□□□□ -2.57
Col6a3E9PWQ3 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-1.02□□□□□ -2.57
Col6a3E9PWQ3 Mir485-201ENSMUST00000093620 73 ntBASIC-1.02□□□□□ -2.57
Col6a3E9PWQ3 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC-1.03□□□□□ -2.57
Col6a3E9PWQ3 Gm22248-201ENSMUST00000082482 150 ntBASIC-1.03□□□□□ -2.57
Col6a3E9PWQ3 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 Gm26022-201ENSMUST00000158663 108 ntBASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 Gm24618-201ENSMUST00000177718 94 ntBASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 Gm23953-201ENSMUST00000178214 94 ntBASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 Gm26332-201ENSMUST00000179813 94 ntBASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 Gm22863-201ENSMUST00000180265 94 ntBASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 Gm28283-201ENSMUST00000185509 178 ntBASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 Gm42677-201ENSMUST00000196363 127 ntBASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 Gm26500-201ENSMUST00000101867 106 ntBASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 Gm13720-201ENSMUST00000120741 196 ntBASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 Gm24064-201ENSMUST00000157486 106 ntBASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 Gm22539-201ENSMUST00000158167 117 ntBASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 Gm24006-201ENSMUST00000158462 132 ntBASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.04□□□□□ -2.58
Col6a3E9PWQ3 Gm23379-201ENSMUST00000180026 107 ntBASIC-1.05□□□□□ -2.58
Col6a3E9PWQ3 Gm27297-201ENSMUST00000183395 105 ntBASIC-1.05□□□□□ -2.58
Col6a3E9PWQ3 Gm25204-201ENSMUST00000082843 106 ntBASIC-1.05□□□□□ -2.58
Col6a3E9PWQ3 Gm14307-201ENSMUST00000118930 291 ntBASIC-1.05□□□□□ -2.58
Col6a3E9PWQ3 Gm14297-201ENSMUST00000129110 291 ntBASIC-1.05□□□□□ -2.58
Col6a3E9PWQ3 Mir6411-201ENSMUST00000183556 108 ntBASIC-1.05□□□□□ -2.58
Col6a3E9PWQ3 Gm22294-201ENSMUST00000083308 104 ntBASIC-1.05□□□□□ -2.58
Col6a3E9PWQ3 Gm25235-201ENSMUST00000179933 107 ntBASIC-1.06□□□□□ -2.58
Col6a3E9PWQ3 Mir7657-201ENSMUST00000196051 57 ntBASIC-1.06□□□□□ -2.58
Col6a3E9PWQ3 Gm43114-201ENSMUST00000198298 343 ntBASIC-1.06□□□□□ -2.58
Col6a3E9PWQ3 AC132833.2-201ENSMUST00000228699 157 ntBASIC-1.06□□□□□ -2.58
Col6a3E9PWQ3 Mir218-1-201ENSMUST00000083669 110 ntBASIC-1.06□□□□□ -2.58
Col6a3E9PWQ3 Gm24640-201ENSMUST00000116949 126 ntBASIC-1.06□□□□□ -2.58
Col6a3E9PWQ3 Gm22626-201ENSMUST00000116990 126 ntBASIC-1.06□□□□□ -2.58
Col6a3E9PWQ3 n-R5s218-201ENSMUST00000122583 109 ntBASIC-1.06□□□□□ -2.58
Col6a3E9PWQ3 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC-1.06□□□□□ -2.58
Col6a3E9PWQ3 AC116589.1-201ENSMUST00000220634 327 ntBASIC-1.06□□□□□ -2.58
Col6a3E9PWQ3 AC164117.2-201ENSMUST00000222090 327 ntBASIC-1.06□□□□□ -2.58
Col6a3E9PWQ3 Gm25296-201ENSMUST00000082566 67 ntBASIC-1.06□□□□□ -2.58
Col6a3E9PWQ3 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC-1.06□□□□□ -2.58
Col6a3E9PWQ3 Gm25656-201ENSMUST00000158466 66 ntBASIC-1.06□□□□□ -2.58
Col6a3E9PWQ3 Mir136-201ENSMUST00000199494 62 ntBASIC-1.06□□□□□ -2.58
Col6a3E9PWQ3 Gm22508-201ENSMUST00000082772 110 ntBASIC-1.06□□□□□ -2.58
Col6a3E9PWQ3 Gm24522-201ENSMUST00000083964 108 ntBASIC-1.06□□□□□ -2.58
Col6a3E9PWQ3 Gm25366-201ENSMUST00000158845 124 ntBASIC-1.07□□□□□ -2.58
Col6a3E9PWQ3 Gm24042-201ENSMUST00000083114 103 ntBASIC-1.07□□□□□ -2.58
Col6a3E9PWQ3 Gm22287-201ENSMUST00000083197 107 ntBASIC-1.07□□□□□ -2.58
Col6a3E9PWQ3 Gm24635-201ENSMUST00000122712 128 ntBASIC-1.07□□□□□ -2.58
Col6a3E9PWQ3 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
Col6a3E9PWQ3 Gm17054-201ENSMUST00000169811 259 ntBASIC-1.07□□□□□ -2.58
Col6a3E9PWQ3 Gm24518-201ENSMUST00000180275 94 ntBASIC-1.07□□□□□ -2.58
Col6a3E9PWQ3 Gm26000-201ENSMUST00000157991 107 ntBASIC-1.08□□□□□ -2.58
Col6a3E9PWQ3 Gm22455-201ENSMUST00000082580 71 ntBASIC-1.08□□□□□ -2.58
Col6a3E9PWQ3 Gm14533-201ENSMUST00000117088 93 ntBASIC-1.08□□□□□ -2.58
Col6a3E9PWQ3 Gm26369-201ENSMUST00000157825 100 ntBASIC-1.08□□□□□ -2.58
Col6a3E9PWQ3 Mir195b-201ENSMUST00000184814 97 ntBASIC-1.08□□□□□ -2.58
Col6a3E9PWQ3 Gm25629-201ENSMUST00000084001 107 ntBASIC-1.08□□□□□ -2.58
Col6a3E9PWQ3 Gm24806-201ENSMUST00000117036 90 ntBASIC-1.09□□□□□ -2.58
Col6a3E9PWQ3 Gm22883-201ENSMUST00000157376 106 ntBASIC-1.09□□□□□ -2.58
Col6a3E9PWQ3 Gm25317-201ENSMUST00000116824 129 ntBASIC-1.09□□□□□ -2.58
Col6a3E9PWQ3 Gm25653-201ENSMUST00000158473 138 ntBASIC-1.09□□□□□ -2.58
Col6a3E9PWQ3 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.09□□□□□ -2.58
Col6a3E9PWQ3 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
Col6a3E9PWQ3 Mir450-2-201ENSMUST00000102444 69 ntBASIC-1.09□□□□□ -2.58
Col6a3E9PWQ3 Gm11834-201ENSMUST00000122257 585 ntBASIC-1.09□□□□□ -2.58
Col6a3E9PWQ3 Gm25329-201ENSMUST00000158041 126 ntBASIC-1.09□□□□□ -2.58
Col6a3E9PWQ3 Gm24223-201ENSMUST00000158827 90 ntBASIC-1.09□□□□□ -2.58
Col6a3E9PWQ3 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Gm23022-201ENSMUST00000158768 180 ntBASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Mir3473a-201ENSMUST00000175011 78 ntBASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Gm23725-201ENSMUST00000177876 107 ntBASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Gm22111-201ENSMUST00000178010 79 ntBASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Gm23687-201ENSMUST00000178664 79 ntBASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Gm24566-201ENSMUST00000179286 79 ntBASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Gm23305-201ENSMUST00000179342 79 ntBASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Gm26389-201ENSMUST00000179819 79 ntBASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Gm22130-201ENSMUST00000179979 79 ntBASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Gm22393-201ENSMUST00000180153 79 ntBASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Gm25085-201ENSMUST00000180298 79 ntBASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Gm25873-201ENSMUST00000180317 107 ntBASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Gm44232-201ENSMUST00000204537 225 ntBASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Gm26228-201ENSMUST00000082512 107 ntBASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Gm23655-201ENSMUST00000122627 105 ntBASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Gm24440-201ENSMUST00000157236 63 ntBASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Gm24847-201ENSMUST00000158032 108 ntBASIC-1.1□□□□□ -2.59
Col6a3E9PWQ3 Gm22433-201ENSMUST00000158550 142 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 139.5 ms