Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Mir7657-201ENSMUST00000196051 57 ntBASIC1.5□□□□□ -2.17
Ptchd4B9EKX1 Gm26123-201ENSMUST00000083363 135 ntBASIC1.5□□□□□ -2.17
Ptchd4B9EKX1 Gm23138-201ENSMUST00000083365 103 ntBASIC1.5□□□□□ -2.17
Ptchd4B9EKX1 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
Ptchd4B9EKX1 Mir653-201ENSMUST00000102402 85 ntBASIC1.49□□□□□ -2.17
Ptchd4B9EKX1 Gm24222-201ENSMUST00000158834 93 ntBASIC1.49□□□□□ -2.17
Ptchd4B9EKX1 Mir7241-201ENSMUST00000184532 64 ntBASIC1.49□□□□□ -2.17
Ptchd4B9EKX1 Mir6962-201ENSMUST00000199512 63 ntBASIC1.49□□□□□ -2.17
Ptchd4B9EKX1 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.49□□□□□ -2.17
Ptchd4B9EKX1 Gm25650-201ENSMUST00000083784 162 ntBASIC1.49□□□□□ -2.17
Ptchd4B9EKX1 Mir343-201ENSMUST00000102360 75 ntBASIC1.48□□□□□ -2.17
Ptchd4B9EKX1 Gm25611-201ENSMUST00000104017 133 ntBASIC1.48□□□□□ -2.17
Ptchd4B9EKX1 Gm25663-201ENSMUST00000157698 135 ntBASIC1.48□□□□□ -2.17
Ptchd4B9EKX1 Gm44962-201ENSMUST00000206460 279 ntBASIC1.48□□□□□ -2.17
Ptchd4B9EKX1 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC1.48□□□□□ -2.17
Ptchd4B9EKX1 Gm22785-201ENSMUST00000104087 132 ntBASIC1.47□□□□□ -2.17
Ptchd4B9EKX1 Gm25623-201ENSMUST00000157216 108 ntBASIC1.47□□□□□ -2.17
Ptchd4B9EKX1 Gm23221-201ENSMUST00000158118 93 ntBASIC1.47□□□□□ -2.17
Ptchd4B9EKX1 Gm22425-201ENSMUST00000158532 138 ntBASIC1.47□□□□□ -2.17
Ptchd4B9EKX1 Gm44462-201ENSMUST00000199696 129 ntBASIC1.47□□□□□ -2.17
Ptchd4B9EKX1 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.17
Ptchd4B9EKX1 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Ptchd4B9EKX1 Gm26082-201ENSMUST00000104070 127 ntBASIC1.46□□□□□ -2.18
Ptchd4B9EKX1 mt-Tt-201ENSMUST00000082422 67 ntBASIC1.46□□□□□ -2.18
Ptchd4B9EKX1 Snord96a-201ENSMUST00000082791 81 ntBASIC1.46□□□□□ -2.18
Ptchd4B9EKX1 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Ptchd4B9EKX1 Mir547-201ENSMUST00000102051 78 ntBASIC1.45□□□□□ -2.18
Ptchd4B9EKX1 Gm23766-201ENSMUST00000103894 80 ntBASIC1.45□□□□□ -2.18
Ptchd4B9EKX1 Gm15289-201ENSMUST00000117793 244 ntBASIC1.45□□□□□ -2.18
Ptchd4B9EKX1 Gm20409-201ENSMUST00000173457 130 ntBASIC1.45□□□□□ -2.18
Ptchd4B9EKX1 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.45□□□□□ -2.18
Ptchd4B9EKX1 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.45□□□□□ -2.18
Ptchd4B9EKX1 Gm24895-201ENSMUST00000122742 74 ntBASIC1.44□□□□□ -2.18
Ptchd4B9EKX1 Gm24842-201ENSMUST00000158681 54 ntBASIC1.44□□□□□ -2.18
Ptchd4B9EKX1 Gm27365-201ENSMUST00000184041 177 ntBASIC1.44□□□□□ -2.18
Ptchd4B9EKX1 Gm42795-201ENSMUST00000198847 76 ntBASIC1.44□□□□□ -2.18
Ptchd4B9EKX1 Gm24588-201ENSMUST00000116696 83 ntBASIC1.43□□□□□ -2.18
Ptchd4B9EKX1 Gm22963-201ENSMUST00000157960 91 ntBASIC1.43□□□□□ -2.18
Ptchd4B9EKX1 Gm25367-201ENSMUST00000158846 106 ntBASIC1.43□□□□□ -2.18
Ptchd4B9EKX1 Mir7063-201ENSMUST00000184158 91 ntBASIC1.43□□□□□ -2.18
Ptchd4B9EKX1 Gm24705-201ENSMUST00000082808 107 ntBASIC1.43□□□□□ -2.18
Ptchd4B9EKX1 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC1.42□□□□□ -2.18
Ptchd4B9EKX1 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.42□□□□□ -2.18
Ptchd4B9EKX1 Mir3968-201ENSMUST00000175355 100 ntBASIC1.42□□□□□ -2.18
Ptchd4B9EKX1 Gm27265-201ENSMUST00000183559 77 ntBASIC1.42□□□□□ -2.18
Ptchd4B9EKX1 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
Ptchd4B9EKX1 Gm26168-201ENSMUST00000083787 112 ntBASIC1.42□□□□□ -2.18
Ptchd4B9EKX1 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Ptchd4B9EKX1 Snord64-201ENSMUST00000104003 67 ntBASIC1.41□□□□□ -2.18
Ptchd4B9EKX1 Gm22780-201ENSMUST00000104084 132 ntBASIC1.41□□□□□ -2.18
Ptchd4B9EKX1 Gm24916-201ENSMUST00000157287 79 ntBASIC1.41□□□□□ -2.18
Ptchd4B9EKX1 Gm24915-201ENSMUST00000157288 78 ntBASIC1.41□□□□□ -2.18
Ptchd4B9EKX1 Gm23083-201ENSMUST00000157851 116 ntBASIC1.41□□□□□ -2.18
Ptchd4B9EKX1 Gm24154-201ENSMUST00000175261 130 ntBASIC1.41□□□□□ -2.18
Ptchd4B9EKX1 Mir6377-201ENSMUST00000183760 114 ntBASIC1.41□□□□□ -2.18
Ptchd4B9EKX1 Gm22828-201ENSMUST00000083768 107 ntBASIC1.41□□□□□ -2.18
Ptchd4B9EKX1 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Ptchd4B9EKX1 Gm25610-201ENSMUST00000104016 129 ntBASIC1.4□□□□□ -2.19
Ptchd4B9EKX1 Gm24586-201ENSMUST00000116695 89 ntBASIC1.4□□□□□ -2.19
Ptchd4B9EKX1 Gm26029-201ENSMUST00000158659 132 ntBASIC1.4□□□□□ -2.19
Ptchd4B9EKX1 Gm16550-201ENSMUST00000162550 126 ntBASIC1.4□□□□□ -2.19
Ptchd4B9EKX1 Mir6240-201ENSMUST00000184281 117 ntBASIC1.4□□□□□ -2.19
Ptchd4B9EKX1 AC147101.2-201ENSMUST00000219756 184 ntBASIC1.4□□□□□ -2.19
Ptchd4B9EKX1 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
Ptchd4B9EKX1 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.39□□□□□ -2.19
Ptchd4B9EKX1 Gm25091-201ENSMUST00000103997 71 ntBASIC1.39□□□□□ -2.19
Ptchd4B9EKX1 Gm24379-201ENSMUST00000122695 86 ntBASIC1.39□□□□□ -2.19
Ptchd4B9EKX1 Gm16307-201ENSMUST00000161269 210 ntBASIC1.39□□□□□ -2.19
Ptchd4B9EKX1 Traj60-201ENSMUST00000167781 54 ntBASIC1.39□□□□□ -2.19
Ptchd4B9EKX1 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.39□□□□□ -2.19
Ptchd4B9EKX1 Mir7059-201ENSMUST00000184825 59 ntBASIC1.39□□□□□ -2.19
Ptchd4B9EKX1 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.39□□□□□ -2.19
Ptchd4B9EKX1 Gm44807-201ENSMUST00000206115 154 ntBASIC1.39□□□□□ -2.19
Ptchd4B9EKX1 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC1.39□□□□□ -2.19
Ptchd4B9EKX1 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.39□□□□□ -2.19
Ptchd4B9EKX1 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.39□□□□□ -2.19
Ptchd4B9EKX1 Gm24252-201ENSMUST00000083700 132 ntBASIC1.39□□□□□ -2.19
Ptchd4B9EKX1 Gm23434-201ENSMUST00000157179 100 ntBASIC1.38□□□□□ -2.19
Ptchd4B9EKX1 Gm22708-201ENSMUST00000158987 103 ntBASIC1.38□□□□□ -2.19
Ptchd4B9EKX1 Gm23636-201ENSMUST00000175070 95 ntBASIC1.38□□□□□ -2.19
Ptchd4B9EKX1 Gm25759-201ENSMUST00000103988 129 ntBASIC1.37□□□□□ -2.19
Ptchd4B9EKX1 Gm22558-201ENSMUST00000157326 95 ntBASIC1.37□□□□□ -2.19
Ptchd4B9EKX1 Gm23329-201ENSMUST00000157415 108 ntBASIC1.37□□□□□ -2.19
Ptchd4B9EKX1 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Ptchd4B9EKX1 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.37□□□□□ -2.19
Ptchd4B9EKX1 Mir211-201ENSMUST00000083651 106 ntBASIC1.37□□□□□ -2.19
Ptchd4B9EKX1 Gm25006-201ENSMUST00000083813 107 ntBASIC1.37□□□□□ -2.19
Ptchd4B9EKX1 Gm24030-201ENSMUST00000083931 164 ntBASIC1.37□□□□□ -2.19
Ptchd4B9EKX1 Gm22451-201ENSMUST00000122803 151 ntBASIC1.36□□□□□ -2.19
Ptchd4B9EKX1 Gm24509-201ENSMUST00000157086 101 ntBASIC1.36□□□□□ -2.19
Ptchd4B9EKX1 Gm25358-201ENSMUST00000157189 101 ntBASIC1.36□□□□□ -2.19
Ptchd4B9EKX1 Gm8034-201ENSMUST00000178853 132 ntBASIC1.36□□□□□ -2.19
Ptchd4B9EKX1 Mir8116-201ENSMUST00000184134 97 ntBASIC1.36□□□□□ -2.19
Ptchd4B9EKX1 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.36□□□□□ -2.19
Ptchd4B9EKX1 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.36□□□□□ -2.19
Ptchd4B9EKX1 AC136457.1-201ENSMUST00000224195 156 ntBASIC1.36□□□□□ -2.19
Ptchd4B9EKX1 Gm22809-201ENSMUST00000082743 156 ntBASIC1.36□□□□□ -2.19
Ptchd4B9EKX1 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.36□□□□□ -2.19
Ptchd4B9EKX1 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Ptchd4B9EKX1 Gm23763-201ENSMUST00000158345 60 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 306.3 ms