Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm44615-201ENSMUST00000206548 358 ntBASIC-1.53□□□□□ -2.65
Trav12-1A0N8R1 Gm26054-201ENSMUST00000083037 107 ntBASIC-1.53□□□□□ -2.65
Trav12-1A0N8R1 Mir302c-201ENSMUST00000083548 68 ntBASIC-1.53□□□□□ -2.65
Trav12-1A0N8R1 Gm25186-201ENSMUST00000083909 108 ntBASIC-1.53□□□□□ -2.65
Trav12-1A0N8R1 Gm23142-201ENSMUST00000101848 105 ntBASIC-1.54□□□□□ -2.66
Trav12-1A0N8R1 Gm26240-201ENSMUST00000101893 105 ntBASIC-1.54□□□□□ -2.66
Trav12-1A0N8R1 Gm25317-201ENSMUST00000116824 129 ntBASIC-1.54□□□□□ -2.66
Trav12-1A0N8R1 Gm11834-201ENSMUST00000122257 585 ntBASIC-1.54□□□□□ -2.66
Trav12-1A0N8R1 Gm23111-201ENSMUST00000122652 105 ntBASIC-1.54□□□□□ -2.66
Trav12-1A0N8R1 Gm22553-201ENSMUST00000157797 295 ntBASIC-1.54□□□□□ -2.66
Trav12-1A0N8R1 Gm25163-201ENSMUST00000158905 104 ntBASIC-1.54□□□□□ -2.66
Trav12-1A0N8R1 Mir376a-201ENSMUST00000197584 68 ntBASIC-1.54□□□□□ -2.66
Trav12-1A0N8R1 Gm5002-201ENSMUST00000207145 223 ntBASIC-1.54□□□□□ -2.66
Trav12-1A0N8R1 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC-1.54□□□□□ -2.66
Trav12-1A0N8R1 Mir20b-201ENSMUST00000102087 80 ntBASIC-1.55□□□□□ -2.66
Trav12-1A0N8R1 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-1.55□□□□□ -2.66
Trav12-1A0N8R1 Gm24381-201ENSMUST00000122697 104 ntBASIC-1.55□□□□□ -2.66
Trav12-1A0N8R1 Gm22166-201ENSMUST00000178419 121 ntBASIC-1.55□□□□□ -2.66
Trav12-1A0N8R1 Gm23288-201ENSMUST00000179213 121 ntBASIC-1.55□□□□□ -2.66
Trav12-1A0N8R1 Gm22169-201ENSMUST00000083229 107 ntBASIC-1.55□□□□□ -2.66
Trav12-1A0N8R1 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.55□□□□□ -2.66
Trav12-1A0N8R1 Gm14626-201ENSMUST00000117619 216 ntBASIC-1.56□□□□□ -2.66
Trav12-1A0N8R1 Gm25909-201ENSMUST00000157619 121 ntBASIC-1.56□□□□□ -2.66
Trav12-1A0N8R1 Mir6904-201ENSMUST00000183443 67 ntBASIC-1.56□□□□□ -2.66
Trav12-1A0N8R1 Gm27410-201ENSMUST00000183851 115 ntBASIC-1.56□□□□□ -2.66
Trav12-1A0N8R1 Gm28648-201ENSMUST00000190092 343 ntBASIC-1.56□□□□□ -2.66
Trav12-1A0N8R1 AC167192.2-201ENSMUST00000224794 198 ntBASIC-1.56□□□□□ -2.66
Trav12-1A0N8R1 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-1.56□□□□□ -2.66
Trav12-1A0N8R1 Gm26329-201ENSMUST00000093723 110 ntBASIC-1.56□□□□□ -2.66
Trav12-1A0N8R1 Gm24372-201ENSMUST00000104400 110 ntBASIC-1.57□□□□□ -2.66
Trav12-1A0N8R1 Gm23655-201ENSMUST00000122627 105 ntBASIC-1.57□□□□□ -2.66
Trav12-1A0N8R1 Gm23145-201ENSMUST00000178912 79 ntBASIC-1.57□□□□□ -2.66
Trav12-1A0N8R1 Gm42622-201ENSMUST00000197229 355 ntBASIC-1.57□□□□□ -2.66
Trav12-1A0N8R1 Gm26202-201ENSMUST00000082910 65 ntBASIC-1.57□□□□□ -2.66
Trav12-1A0N8R1 Mir574-201ENSMUST00000103854 78 ntBASIC-1.58□□□□□ -2.66
Trav12-1A0N8R1 Gm22542-201ENSMUST00000158166 95 ntBASIC-1.58□□□□□ -2.66
Trav12-1A0N8R1 Gm23016-201ENSMUST00000158431 62 ntBASIC-1.58□□□□□ -2.66
Trav12-1A0N8R1 Gm38268-201ENSMUST00000195813 193 ntBASIC-1.58□□□□□ -2.66
Trav12-1A0N8R1 Snord45b-201ENSMUST00000082797 71 ntBASIC-1.58□□□□□ -2.66
Trav12-1A0N8R1 Gm24037-201ENSMUST00000082871 180 ntBASIC-1.58□□□□□ -2.66
Trav12-1A0N8R1 Gm24453-201ENSMUST00000083346 76 ntBASIC-1.58□□□□□ -2.66
Trav12-1A0N8R1 Gm26107-201ENSMUST00000083972 107 ntBASIC-1.58□□□□□ -2.66
Trav12-1A0N8R1 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.59□□□□□ -2.66
Trav12-1A0N8R1 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.59□□□□□ -2.66
Trav12-1A0N8R1 Gm25450-201ENSMUST00000179144 107 ntBASIC-1.59□□□□□ -2.66
Trav12-1A0N8R1 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.59□□□□□ -2.66
Trav12-1A0N8R1 Gm22455-201ENSMUST00000082580 71 ntBASIC-1.59□□□□□ -2.66
Trav12-1A0N8R1 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC-1.6□□□□□ -2.67
Trav12-1A0N8R1 Gm23654-201ENSMUST00000116758 126 ntBASIC-1.6□□□□□ -2.67
Trav12-1A0N8R1 Gm22720-201ENSMUST00000122710 87 ntBASIC-1.6□□□□□ -2.67
Trav12-1A0N8R1 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-1.6□□□□□ -2.67
Trav12-1A0N8R1 Gm25828-201ENSMUST00000157087 95 ntBASIC-1.6□□□□□ -2.67
Trav12-1A0N8R1 Gm25993-201ENSMUST00000175391 80 ntBASIC-1.6□□□□□ -2.67
Trav12-1A0N8R1 Trav5-2-201ENSMUST00000199855 280 ntBASIC-1.6□□□□□ -2.67
Trav12-1A0N8R1 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
Trav12-1A0N8R1 AC132437.1-201ENSMUST00000218308 320 ntBASIC-1.6□□□□□ -2.67
Trav12-1A0N8R1 Gm25586-201ENSMUST00000082499 112 ntBASIC-1.6□□□□□ -2.67
Trav12-1A0N8R1 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.6□□□□□ -2.67
Trav12-1A0N8R1 Gm25879-201ENSMUST00000104330 107 ntBASIC-1.61□□□□□ -2.67
Trav12-1A0N8R1 Gm24275-201ENSMUST00000116780 146 ntBASIC-1.61□□□□□ -2.67
Trav12-1A0N8R1 Gm23904-201ENSMUST00000157567 124 ntBASIC-1.61□□□□□ -2.67
Trav12-1A0N8R1 Gm22675-201ENSMUST00000158430 104 ntBASIC-1.61□□□□□ -2.67
Trav12-1A0N8R1 Zfp950-206ENSMUST00000178819 171 ntBASIC-1.61□□□□□ -2.67
Trav12-1A0N8R1 Mir302d-201ENSMUST00000083513 66 ntBASIC-1.61□□□□□ -2.67
Trav12-1A0N8R1 Gm24640-201ENSMUST00000116949 126 ntBASIC-1.62□□□□□ -2.67
Trav12-1A0N8R1 Gm22626-201ENSMUST00000116990 126 ntBASIC-1.62□□□□□ -2.67
Trav12-1A0N8R1 Gm12584-201ENSMUST00000117109 1105 ntBASIC-1.62□□□□□ -2.67
Trav12-1A0N8R1 Gm27749-201ENSMUST00000183651 125 ntBASIC-1.62□□□□□ -2.67
Trav12-1A0N8R1 AC116589.4-201ENSMUST00000222390 216 ntBASIC-1.62□□□□□ -2.67
Trav12-1A0N8R1 Gm26495-201ENSMUST00000083152 137 ntBASIC-1.62□□□□□ -2.67
Trav12-1A0N8R1 Gm14301-201ENSMUST00000120181 324 ntBASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 Gm23661-201ENSMUST00000122630 87 ntBASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 Gm25366-201ENSMUST00000158845 124 ntBASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 AC102369.1-201ENSMUST00000218415 373 ntBASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 Gm25588-201ENSMUST00000082501 140 ntBASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 Gm23448-201ENSMUST00000083151 104 ntBASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 Gm25337-201ENSMUST00000083723 104 ntBASIC-1.63□□□□□ -2.67
Trav12-1A0N8R1 Gm24377-201ENSMUST00000104398 131 ntBASIC-1.64□□□□□ -2.67
Trav12-1A0N8R1 Gm13345-201ENSMUST00000121928 228 ntBASIC-1.64□□□□□ -2.67
Trav12-1A0N8R1 Gm25108-201ENSMUST00000122473 78 ntBASIC-1.64□□□□□ -2.67
Trav12-1A0N8R1 Gm25055-201ENSMUST00000157369 76 ntBASIC-1.64□□□□□ -2.67
Trav12-1A0N8R1 Gm22788-201ENSMUST00000157876 61 ntBASIC-1.64□□□□□ -2.67
Trav12-1A0N8R1 AC121844.1-201ENSMUST00000218706 137 ntBASIC-1.64□□□□□ -2.67
Trav12-1A0N8R1 AC164297.5-201ENSMUST00000224365 198 ntBASIC-1.64□□□□□ -2.67
Trav12-1A0N8R1 mt-Tw-201ENSMUST00000082397 67 ntBASIC-1.64□□□□□ -2.67
Trav12-1A0N8R1 Snora19-201ENSMUST00000082962 132 ntBASIC-1.64□□□□□ -2.67
Trav12-1A0N8R1 Gm23658-201ENSMUST00000083233 132 ntBASIC-1.64□□□□□ -2.67
Trav12-1A0N8R1 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.65□□□□□ -2.67
Trav12-1A0N8R1 Mir218-1-201ENSMUST00000083669 110 ntBASIC-1.65□□□□□ -2.67
Retrieved 100 of 76,532 protein–RNA pairs in 206 ms