Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm22105-201ENSMUST00000116734 116 ntBASIC0.92□□□□□ -2.26
H2afb1S4R1E0 Snora24-201ENSMUST00000174989 130 ntBASIC0.92□□□□□ -2.26
H2afb1S4R1E0 Gm27974-201ENSMUST00000183415 105 ntBASIC0.92□□□□□ -2.26
H2afb1S4R1E0 Mir3569-201ENSMUST00000185080 58 ntBASIC0.92□□□□□ -2.26
H2afb1S4R1E0 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.92□□□□□ -2.26
H2afb1S4R1E0 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.92□□□□□ -2.26
H2afb1S4R1E0 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.92□□□□□ -2.26
H2afb1S4R1E0 Gm25851-201ENSMUST00000082794 107 ntBASIC0.92□□□□□ -2.26
H2afb1S4R1E0 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.92□□□□□ -2.26
H2afb1S4R1E0 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.92□□□□□ -2.26
H2afb1S4R1E0 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
H2afb1S4R1E0 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
H2afb1S4R1E0 Gm22373-201ENSMUST00000104584 89 ntBASIC0.91□□□□□ -2.26
H2afb1S4R1E0 Gm22796-201ENSMUST00000157234 106 ntBASIC0.91□□□□□ -2.26
H2afb1S4R1E0 Gm22332-201ENSMUST00000158072 126 ntBASIC0.91□□□□□ -2.26
H2afb1S4R1E0 Gm23893-201ENSMUST00000158106 134 ntBASIC0.91□□□□□ -2.26
H2afb1S4R1E0 Gm27420-201ENSMUST00000183823 79 ntBASIC0.91□□□□□ -2.26
H2afb1S4R1E0 Mir6481-201ENSMUST00000184617 110 ntBASIC0.91□□□□□ -2.26
H2afb1S4R1E0 Mir6928-201ENSMUST00000185166 70 ntBASIC0.91□□□□□ -2.26
H2afb1S4R1E0 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.91□□□□□ -2.26
H2afb1S4R1E0 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.91□□□□□ -2.26
H2afb1S4R1E0 Gm26123-201ENSMUST00000083363 135 ntBASIC0.91□□□□□ -2.26
H2afb1S4R1E0 Gm24252-201ENSMUST00000083700 132 ntBASIC0.91□□□□□ -2.26
H2afb1S4R1E0 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
H2afb1S4R1E0 Gm23320-201ENSMUST00000104462 127 ntBASIC0.9□□□□□ -2.27
H2afb1S4R1E0 Gm24683-201ENSMUST00000104840 88 ntBASIC0.9□□□□□ -2.27
H2afb1S4R1E0 Gm14502-201ENSMUST00000118154 113 ntBASIC0.9□□□□□ -2.27
H2afb1S4R1E0 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.9□□□□□ -2.27
H2afb1S4R1E0 Gm25011-201ENSMUST00000158398 126 ntBASIC0.9□□□□□ -2.27
H2afb1S4R1E0 Gm27934-201ENSMUST00000158795 63 ntBASIC0.9□□□□□ -2.27
H2afb1S4R1E0 Gm25364-201ENSMUST00000158851 107 ntBASIC0.9□□□□□ -2.27
H2afb1S4R1E0 Gm27792-201ENSMUST00000184031 115 ntBASIC0.9□□□□□ -2.27
H2afb1S4R1E0 Gm42795-201ENSMUST00000198847 76 ntBASIC0.9□□□□□ -2.27
H2afb1S4R1E0 Gm44301-201ENSMUST00000200362 143 ntBASIC0.9□□□□□ -2.27
H2afb1S4R1E0 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.9□□□□□ -2.27
H2afb1S4R1E0 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.9□□□□□ -2.27
H2afb1S4R1E0 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.9□□□□□ -2.27
H2afb1S4R1E0 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
H2afb1S4R1E0 Mir343-201ENSMUST00000102360 75 ntBASIC0.89□□□□□ -2.27
H2afb1S4R1E0 Gm44489-201ENSMUST00000104619 97 ntBASIC0.89□□□□□ -2.27
H2afb1S4R1E0 Gm24401-201ENSMUST00000157868 91 ntBASIC0.89□□□□□ -2.27
H2afb1S4R1E0 Gm22967-201ENSMUST00000157956 239 ntBASIC0.89□□□□□ -2.27
H2afb1S4R1E0 Gm24808-201ENSMUST00000157993 118 ntBASIC0.89□□□□□ -2.27
H2afb1S4R1E0 Gm24221-201ENSMUST00000158833 313 ntBASIC0.89□□□□□ -2.27
H2afb1S4R1E0 Mir7062-201ENSMUST00000185038 66 ntBASIC0.89□□□□□ -2.27
H2afb1S4R1E0 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
H2afb1S4R1E0 Gm23303-201ENSMUST00000082714 152 ntBASIC0.89□□□□□ -2.27
H2afb1S4R1E0 Gm24232-201ENSMUST00000104314 132 ntBASIC0.88□□□□□ -2.27
H2afb1S4R1E0 Gm26018-201ENSMUST00000104406 128 ntBASIC0.88□□□□□ -2.27
H2afb1S4R1E0 Gm23988-201ENSMUST00000117034 122 ntBASIC0.88□□□□□ -2.27
H2afb1S4R1E0 Gm11644-201ENSMUST00000119735 150 ntBASIC0.88□□□□□ -2.27
H2afb1S4R1E0 Gm22551-201ENSMUST00000157795 103 ntBASIC0.88□□□□□ -2.27
H2afb1S4R1E0 Gm23859-201ENSMUST00000158383 64 ntBASIC0.88□□□□□ -2.27
H2afb1S4R1E0 Gm44338-201ENSMUST00000198614 110 ntBASIC0.88□□□□□ -2.27
H2afb1S4R1E0 Gm43749-201ENSMUST00000199345 352 ntBASIC0.88□□□□□ -2.27
H2afb1S4R1E0 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.88□□□□□ -2.27
H2afb1S4R1E0 Mir22-201ENSMUST00000083595 95 ntBASIC0.88□□□□□ -2.27
H2afb1S4R1E0 Gm23947-201ENSMUST00000093636 107 ntBASIC0.88□□□□□ -2.27
H2afb1S4R1E0 Gm25980-201ENSMUST00000157176 218 ntBASIC0.87□□□□□ -2.27
H2afb1S4R1E0 Gm25769-201ENSMUST00000158569 127 ntBASIC0.87□□□□□ -2.27
H2afb1S4R1E0 Mir1961-201ENSMUST00000158643 112 ntBASIC0.87□□□□□ -2.27
H2afb1S4R1E0 Gm27898-201ENSMUST00000183987 80 ntBASIC0.87□□□□□ -2.27
H2afb1S4R1E0 Mir6380-201ENSMUST00000184334 81 ntBASIC0.87□□□□□ -2.27
H2afb1S4R1E0 Mir7050-201ENSMUST00000184636 60 ntBASIC0.87□□□□□ -2.27
H2afb1S4R1E0 Gm18213-201ENSMUST00000207850 178 ntBASIC0.87□□□□□ -2.27
H2afb1S4R1E0 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.87□□□□□ -2.27
H2afb1S4R1E0 Gm23445-201ENSMUST00000082800 107 ntBASIC0.87□□□□□ -2.27
H2afb1S4R1E0 Snord35a-201ENSMUST00000083884 90 ntBASIC0.87□□□□□ -2.27
H2afb1S4R1E0 Gm25938-201ENSMUST00000104139 166 ntBASIC0.86□□□□□ -2.27
H2afb1S4R1E0 Gm3788-201ENSMUST00000119949 136 ntBASIC0.86□□□□□ -2.27
H2afb1S4R1E0 Mir1966-201ENSMUST00000158807 108 ntBASIC0.86□□□□□ -2.27
H2afb1S4R1E0 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.86□□□□□ -2.27
H2afb1S4R1E0 Gm23636-201ENSMUST00000175070 95 ntBASIC0.86□□□□□ -2.27
H2afb1S4R1E0 Gm27928-201ENSMUST00000183747 256 ntBASIC0.86□□□□□ -2.27
H2afb1S4R1E0 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.86□□□□□ -2.27
H2afb1S4R1E0 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.86□□□□□ -2.27
H2afb1S4R1E0 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.86□□□□□ -2.27
H2afb1S4R1E0 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.85□□□□□ -2.27
H2afb1S4R1E0 Gm26011-201ENSMUST00000104410 104 ntBASIC0.85□□□□□ -2.27
H2afb1S4R1E0 Gm22999-201ENSMUST00000157082 88 ntBASIC0.85□□□□□ -2.27
H2afb1S4R1E0 Gm24747-201ENSMUST00000157835 87 ntBASIC0.85□□□□□ -2.27
H2afb1S4R1E0 Gm20386-201ENSMUST00000174010 132 ntBASIC0.85□□□□□ -2.27
H2afb1S4R1E0 Gm27699-201ENSMUST00000183553 180 ntBASIC0.85□□□□□ -2.27
H2afb1S4R1E0 Gm37545-201ENSMUST00000186512 148 ntBASIC0.85□□□□□ -2.27
H2afb1S4R1E0 Mir6962-201ENSMUST00000199512 63 ntBASIC0.85□□□□□ -2.27
H2afb1S4R1E0 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.85□□□□□ -2.27
H2afb1S4R1E0 Snord61-201ENSMUST00000083176 71 ntBASIC0.85□□□□□ -2.27
H2afb1S4R1E0 Gm23838-201ENSMUST00000158067 162 ntBASIC0.84□□□□□ -2.27
H2afb1S4R1E0 Gm22911-201ENSMUST00000177920 107 ntBASIC0.84□□□□□ -2.27
H2afb1S4R1E0 Gm44322-201ENSMUST00000196830 115 ntBASIC0.84□□□□□ -2.27
H2afb1S4R1E0 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.84□□□□□ -2.27
H2afb1S4R1E0 Gm24311-201ENSMUST00000082570 104 ntBASIC0.84□□□□□ -2.27
H2afb1S4R1E0 Mir411-201ENSMUST00000083543 82 ntBASIC0.84□□□□□ -2.27
H2afb1S4R1E0 Gm22750-201ENSMUST00000102076 103 ntBASIC0.83□□□□□ -2.28
H2afb1S4R1E0 Gm22544-201ENSMUST00000104349 127 ntBASIC0.83□□□□□ -2.28
H2afb1S4R1E0 Gm24509-201ENSMUST00000157086 101 ntBASIC0.83□□□□□ -2.28
H2afb1S4R1E0 Gm25358-201ENSMUST00000157189 101 ntBASIC0.83□□□□□ -2.28
H2afb1S4R1E0 Mir3094-201ENSMUST00000175121 64 ntBASIC0.83□□□□□ -2.28
H2afb1S4R1E0 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
H2afb1S4R1E0 Gm38323-201ENSMUST00000192450 210 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 246 ms