Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm44462-201ENSMUST00000199696 129 ntBASIC2.61□□□□□ -1.99
Prpf40aQ9R1C7 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Prpf40aQ9R1C7 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Prpf40aQ9R1C7 Gm25866-201ENSMUST00000158245 112 ntBASIC2.6□□□□□ -1.99
Prpf40aQ9R1C7 Gm24880-201ENSMUST00000158776 85 ntBASIC2.6□□□□□ -1.99
Prpf40aQ9R1C7 Gm43722-201ENSMUST00000196054 124 ntBASIC2.6□□□□□ -1.99
Prpf40aQ9R1C7 Gm24524-201ENSMUST00000082925 170 ntBASIC2.6□□□□□ -1.99
Prpf40aQ9R1C7 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.6□□□□□ -1.99
Prpf40aQ9R1C7 Gm26154-201ENSMUST00000102339 96 ntBASIC2.59□□□□□ -1.99
Prpf40aQ9R1C7 Gm22500-201ENSMUST00000158982 99 ntBASIC2.59□□□□□ -1.99
Prpf40aQ9R1C7 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Prpf40aQ9R1C7 Gm13433-201ENSMUST00000121701 240 ntBASIC2.58□□□□□ -2
Prpf40aQ9R1C7 Gm23601-201ENSMUST00000157259 131 ntBASIC2.58□□□□□ -2
Prpf40aQ9R1C7 Gm22517-201ENSMUST00000158265 136 ntBASIC2.58□□□□□ -2
Prpf40aQ9R1C7 Gm25044-201ENSMUST00000158603 104 ntBASIC2.58□□□□□ -2
Prpf40aQ9R1C7 Gm23005-201ENSMUST00000158950 136 ntBASIC2.58□□□□□ -2
Prpf40aQ9R1C7 Mir3075-201ENSMUST00000175340 85 ntBASIC2.58□□□□□ -2
Prpf40aQ9R1C7 Mir3069-201ENSMUST00000198802 65 ntBASIC2.58□□□□□ -2
Prpf40aQ9R1C7 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.58□□□□□ -2
Prpf40aQ9R1C7 Mir221-201ENSMUST00000083488 95 ntBASIC2.58□□□□□ -2
Prpf40aQ9R1C7 Gm44560-201ENSMUST00000207816 3115 ntBASIC2.57□□□□□ -2
Prpf40aQ9R1C7 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Prpf40aQ9R1C7 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.57□□□□□ -2
Prpf40aQ9R1C7 Gm23817-201ENSMUST00000158449 104 ntBASIC2.57□□□□□ -2
Prpf40aQ9R1C7 Gm25368-201ENSMUST00000158847 131 ntBASIC2.57□□□□□ -2
Prpf40aQ9R1C7 Gm23963-201ENSMUST00000179603 77 ntBASIC2.57□□□□□ -2
Prpf40aQ9R1C7 Mir423-201ENSMUST00000083584 109 ntBASIC2.57□□□□□ -2
Prpf40aQ9R1C7 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.57□□□□□ -2
Prpf40aQ9R1C7 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Prpf40aQ9R1C7 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.57□□□□□ -2
Prpf40aQ9R1C7 Gm22752-201ENSMUST00000102083 109 ntBASIC2.56□□□□□ -2
Prpf40aQ9R1C7 Gm23652-201ENSMUST00000116752 107 ntBASIC2.56□□□□□ -2
Prpf40aQ9R1C7 Gm23889-201ENSMUST00000122689 104 ntBASIC2.56□□□□□ -2
Prpf40aQ9R1C7 Gm24769-201ENSMUST00000158506 129 ntBASIC2.56□□□□□ -2
Prpf40aQ9R1C7 Gm22947-201ENSMUST00000158559 91 ntBASIC2.56□□□□□ -2
Prpf40aQ9R1C7 Gm16539-201ENSMUST00000160086 327 ntBASIC2.56□□□□□ -2
Prpf40aQ9R1C7 Mir3057-201ENSMUST00000175040 91 ntBASIC2.56□□□□□ -2
Prpf40aQ9R1C7 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.56□□□□□ -2
Prpf40aQ9R1C7 Mir21c-201ENSMUST00000184910 78 ntBASIC2.56□□□□□ -2
Prpf40aQ9R1C7 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.56□□□□□ -2
Prpf40aQ9R1C7 Gm42935-201ENSMUST00000202004 151 ntBASIC2.56□□□□□ -2
Prpf40aQ9R1C7 Gm43977-201ENSMUST00000203970 189 ntBASIC2.56□□□□□ -2
Prpf40aQ9R1C7 CT571266.1-201ENSMUST00000222859 153 ntBASIC2.56□□□□□ -2
Prpf40aQ9R1C7 Mir127-201ENSMUST00000093568 70 ntBASIC2.56□□□□□ -2
Prpf40aQ9R1C7 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Prpf40aQ9R1C7 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Prpf40aQ9R1C7 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Prpf40aQ9R1C7 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Prpf40aQ9R1C7 Gm14588-201ENSMUST00000119895 172 ntBASIC2.55□□□□□ -2
Prpf40aQ9R1C7 Gm24075-201ENSMUST00000158175 72 ntBASIC2.55□□□□□ -2
Prpf40aQ9R1C7 Gm26466-201ENSMUST00000179615 79 ntBASIC2.55□□□□□ -2
Prpf40aQ9R1C7 Gm27722-201ENSMUST00000183908 76 ntBASIC2.55□□□□□ -2
Prpf40aQ9R1C7 Mir7118-201ENSMUST00000197760 61 ntBASIC2.55□□□□□ -2
Prpf40aQ9R1C7 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Prpf40aQ9R1C7 Mir654-201ENSMUST00000104787 84 ntBASIC2.54□□□□□ -2
Prpf40aQ9R1C7 Gm25329-201ENSMUST00000158041 126 ntBASIC2.54□□□□□ -2
Prpf40aQ9R1C7 Gm25976-201ENSMUST00000158695 130 ntBASIC2.54□□□□□ -2
Prpf40aQ9R1C7 Gm25838-201ENSMUST00000158920 120 ntBASIC2.54□□□□□ -2
Prpf40aQ9R1C7 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.54□□□□□ -2
Prpf40aQ9R1C7 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Prpf40aQ9R1C7 Gm26051-201ENSMUST00000104642 93 ntBASIC2.53□□□□□ -2
Prpf40aQ9R1C7 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.53□□□□□ -2
Prpf40aQ9R1C7 Gm22554-201ENSMUST00000157798 147 ntBASIC2.53□□□□□ -2
Prpf40aQ9R1C7 Gm22011-201ENSMUST00000158790 123 ntBASIC2.53□□□□□ -2
Prpf40aQ9R1C7 Mir6925-201ENSMUST00000197857 70 ntBASIC2.53□□□□□ -2
Prpf40aQ9R1C7 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
Prpf40aQ9R1C7 Gm26077-201ENSMUST00000104064 123 ntBASIC2.52□□□□□ -2.01
Prpf40aQ9R1C7 Gm24274-201ENSMUST00000116787 124 ntBASIC2.52□□□□□ -2.01
Prpf40aQ9R1C7 Gm24907-201ENSMUST00000116932 128 ntBASIC2.52□□□□□ -2.01
Prpf40aQ9R1C7 Gm37557-201ENSMUST00000191640 139 ntBASIC2.52□□□□□ -2.01
Prpf40aQ9R1C7 Gm43206-201ENSMUST00000197990 114 ntBASIC2.52□□□□□ -2.01
Prpf40aQ9R1C7 Snord7-201ENSMUST00000083781 97 ntBASIC2.52□□□□□ -2.01
Prpf40aQ9R1C7 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Prpf40aQ9R1C7 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Prpf40aQ9R1C7 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Prpf40aQ9R1C7 Gm26280-201ENSMUST00000157096 101 ntBASIC2.51□□□□□ -2.01
Prpf40aQ9R1C7 Gm23351-201ENSMUST00000158427 125 ntBASIC2.51□□□□□ -2.01
Prpf40aQ9R1C7 Gm16561-201ENSMUST00000163001 192 ntBASIC2.51□□□□□ -2.01
Prpf40aQ9R1C7 Gm25851-201ENSMUST00000082794 107 ntBASIC2.51□□□□□ -2.01
Prpf40aQ9R1C7 Gm24044-201ENSMUST00000083107 156 ntBASIC2.51□□□□□ -2.01
Prpf40aQ9R1C7 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Prpf40aQ9R1C7 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Prpf40aQ9R1C7 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.5□□□□□ -2.01
Prpf40aQ9R1C7 Gm15654-201ENSMUST00000152660 300 ntBASIC2.5□□□□□ -2.01
Prpf40aQ9R1C7 Gm22729-201ENSMUST00000158088 129 ntBASIC2.5□□□□□ -2.01
Prpf40aQ9R1C7 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.5□□□□□ -2.01
Prpf40aQ9R1C7 Gm27369-201ENSMUST00000185182 71 ntBASIC2.5□□□□□ -2.01
Prpf40aQ9R1C7 Mir7232-201ENSMUST00000197929 74 ntBASIC2.5□□□□□ -2.01
Prpf40aQ9R1C7 Gm24313-201ENSMUST00000082561 133 ntBASIC2.5□□□□□ -2.01
Prpf40aQ9R1C7 Gm24661-201ENSMUST00000083205 104 ntBASIC2.5□□□□□ -2.01
Prpf40aQ9R1C7 Gm24698-201ENSMUST00000083883 130 ntBASIC2.5□□□□□ -2.01
Prpf40aQ9R1C7 Mir802-201ENSMUST00000103258 97 ntBASIC2.49□□□□□ -2.01
Prpf40aQ9R1C7 Gm22200-201ENSMUST00000158614 67 ntBASIC2.49□□□□□ -2.01
Prpf40aQ9R1C7 Snora24-201ENSMUST00000174989 130 ntBASIC2.49□□□□□ -2.01
Prpf40aQ9R1C7 Gm25707-201ENSMUST00000175120 96 ntBASIC2.49□□□□□ -2.01
Prpf40aQ9R1C7 Mir5104-201ENSMUST00000175319 94 ntBASIC2.49□□□□□ -2.01
Prpf40aQ9R1C7 Snord50a-201ENSMUST00000178154 72 ntBASIC2.49□□□□□ -2.01
Prpf40aQ9R1C7 Gm24463-201ENSMUST00000178417 72 ntBASIC2.49□□□□□ -2.01
Prpf40aQ9R1C7 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.49□□□□□ -2.01
Prpf40aQ9R1C7 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 191.5 ms