Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm25357-201ENSMUST00000082745 72 ntBASIC1.69□□□□□ -2.14
Shroom3Q9QXN0 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.69□□□□□ -2.14
Shroom3Q9QXN0 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.69□□□□□ -2.14
Shroom3Q9QXN0 Gm26339-201ENSMUST00000102368 99 ntBASIC1.68□□□□□ -2.14
Shroom3Q9QXN0 Gm22163-201ENSMUST00000158408 135 ntBASIC1.68□□□□□ -2.14
Shroom3Q9QXN0 Mir3083-201ENSMUST00000175377 64 ntBASIC1.68□□□□□ -2.14
Shroom3Q9QXN0 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.68□□□□□ -2.14
Shroom3Q9QXN0 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Shroom3Q9QXN0 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1.68□□□□□ -2.14
Shroom3Q9QXN0 Gm22673-201ENSMUST00000104415 131 ntBASIC1.68□□□□□ -2.14
Shroom3Q9QXN0 Gm14947-201ENSMUST00000133704 303 ntBASIC1.68□□□□□ -2.14
Shroom3Q9QXN0 Gm24913-201ENSMUST00000157286 107 ntBASIC1.68□□□□□ -2.14
Shroom3Q9QXN0 Gm25558-201ENSMUST00000158083 106 ntBASIC1.68□□□□□ -2.14
Shroom3Q9QXN0 Gm23898-201ENSMUST00000158111 103 ntBASIC1.68□□□□□ -2.14
Shroom3Q9QXN0 Gm22069-201ENSMUST00000179911 107 ntBASIC1.68□□□□□ -2.14
Shroom3Q9QXN0 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.68□□□□□ -2.14
Shroom3Q9QXN0 Gm19855-201ENSMUST00000210145 249 ntBASIC1.68□□□□□ -2.14
Shroom3Q9QXN0 AC136457.1-201ENSMUST00000224195 156 ntBASIC1.68□□□□□ -2.14
Shroom3Q9QXN0 Gm25851-201ENSMUST00000082794 107 ntBASIC1.67□□□□□ -2.14
Shroom3Q9QXN0 Gm38162-201ENSMUST00000195562 4597 ntBASIC1.67□□□□□ -2.14
Shroom3Q9QXN0 Gm25091-201ENSMUST00000103997 71 ntBASIC1.67□□□□□ -2.14
Shroom3Q9QXN0 Gm25544-201ENSMUST00000122676 120 ntBASIC1.67□□□□□ -2.14
Shroom3Q9QXN0 Gm44478-201ENSMUST00000204875 114 ntBASIC1.67□□□□□ -2.14
Shroom3Q9QXN0 Gm22866-201ENSMUST00000083947 177 ntBASIC1.67□□□□□ -2.14
Shroom3Q9QXN0 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Shroom3Q9QXN0 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.66□□□□□ -2.14
Shroom3Q9QXN0 Gm25526-201ENSMUST00000104332 132 ntBASIC1.66□□□□□ -2.14
Shroom3Q9QXN0 Gm24333-201ENSMUST00000175101 84 ntBASIC1.66□□□□□ -2.14
Shroom3Q9QXN0 Mir6377-201ENSMUST00000183760 114 ntBASIC1.66□□□□□ -2.14
Shroom3Q9QXN0 Gm28647-201ENSMUST00000188416 197 ntBASIC1.66□□□□□ -2.14
Shroom3Q9QXN0 Gm19563-201ENSMUST00000222031 270 ntBASIC1.66□□□□□ -2.14
Shroom3Q9QXN0 Gm26076-201ENSMUST00000104065 105 ntBASIC1.65□□□□□ -2.14
Shroom3Q9QXN0 Gm23654-201ENSMUST00000116758 126 ntBASIC1.65□□□□□ -2.14
Shroom3Q9QXN0 Gm14588-201ENSMUST00000119895 172 ntBASIC1.65□□□□□ -2.14
Shroom3Q9QXN0 Gm22451-201ENSMUST00000122803 151 ntBASIC1.65□□□□□ -2.14
Shroom3Q9QXN0 Snord50a-201ENSMUST00000178154 72 ntBASIC1.65□□□□□ -2.14
Shroom3Q9QXN0 Gm24463-201ENSMUST00000178417 72 ntBASIC1.65□□□□□ -2.14
Shroom3Q9QXN0 Gm8034-201ENSMUST00000178853 132 ntBASIC1.65□□□□□ -2.14
Shroom3Q9QXN0 Gm28383-201ENSMUST00000187563 139 ntBASIC1.65□□□□□ -2.14
Shroom3Q9QXN0 AC126939.1-201ENSMUST00000224943 226 ntBASIC1.65□□□□□ -2.14
Shroom3Q9QXN0 Mir293-201ENSMUST00000104841 80 ntBASIC1.65□□□□□ -2.15
Shroom3Q9QXN0 Gm24649-201ENSMUST00000157106 134 ntBASIC1.65□□□□□ -2.15
Shroom3Q9QXN0 Gm22943-201ENSMUST00000158564 76 ntBASIC1.65□□□□□ -2.15
Shroom3Q9QXN0 Gm25831-201ENSMUST00000158924 163 ntBASIC1.65□□□□□ -2.15
Shroom3Q9QXN0 Mir6388-201ENSMUST00000184417 75 ntBASIC1.65□□□□□ -2.15
Shroom3Q9QXN0 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Shroom3Q9QXN0 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Shroom3Q9QXN0 Gm23244-201ENSMUST00000083375 92 ntBASIC1.65□□□□□ -2.15
Shroom3Q9QXN0 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Shroom3Q9QXN0 Gm11856-201ENSMUST00000118712 276 ntBASIC1.64□□□□□ -2.15
Shroom3Q9QXN0 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.64□□□□□ -2.15
Shroom3Q9QXN0 Gm22387-201ENSMUST00000158191 131 ntBASIC1.64□□□□□ -2.15
Shroom3Q9QXN0 Gm23854-201ENSMUST00000158378 108 ntBASIC1.64□□□□□ -2.15
Shroom3Q9QXN0 Gm45429-201ENSMUST00000209527 172 ntBASIC1.64□□□□□ -2.15
Shroom3Q9QXN0 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Shroom3Q9QXN0 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Shroom3Q9QXN0 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.64□□□□□ -2.15
Shroom3Q9QXN0 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Shroom3Q9QXN0 Gm24468-201ENSMUST00000104489 104 ntBASIC1.63□□□□□ -2.15
Shroom3Q9QXN0 Gm23652-201ENSMUST00000116752 107 ntBASIC1.63□□□□□ -2.15
Shroom3Q9QXN0 Gm16265-201ENSMUST00000134558 108 ntBASIC1.63□□□□□ -2.15
Shroom3Q9QXN0 Gm25884-201ENSMUST00000157782 62 ntBASIC1.63□□□□□ -2.15
Shroom3Q9QXN0 Gm22729-201ENSMUST00000158088 129 ntBASIC1.63□□□□□ -2.15
Shroom3Q9QXN0 Gm25367-201ENSMUST00000158846 106 ntBASIC1.63□□□□□ -2.15
Shroom3Q9QXN0 Mir6394-201ENSMUST00000184738 99 ntBASIC1.63□□□□□ -2.15
Shroom3Q9QXN0 Gm45791-201ENSMUST00000212908 352 ntBASIC1.63□□□□□ -2.15
Shroom3Q9QXN0 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.63□□□□□ -2.15
Shroom3Q9QXN0 Gm24261-201ENSMUST00000083744 104 ntBASIC1.63□□□□□ -2.15
Shroom3Q9QXN0 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Shroom3Q9QXN0 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
Shroom3Q9QXN0 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.63□□□□□ -2.15
Shroom3Q9QXN0 Gm23986-201ENSMUST00000157144 63 ntBASIC1.63□□□□□ -2.15
Shroom3Q9QXN0 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.63□□□□□ -2.15
Shroom3Q9QXN0 Mir3968-201ENSMUST00000175355 100 ntBASIC1.63□□□□□ -2.15
Shroom3Q9QXN0 Gm22772-201ENSMUST00000104451 121 ntBASIC1.62□□□□□ -2.15
Shroom3Q9QXN0 Gm14882-201ENSMUST00000117216 218 ntBASIC1.62□□□□□ -2.15
Shroom3Q9QXN0 Mir3961-201ENSMUST00000198795 59 ntBASIC1.62□□□□□ -2.15
Shroom3Q9QXN0 Mir7-1-201ENSMUST00000083500 108 ntBASIC1.62□□□□□ -2.15
Shroom3Q9QXN0 Mir320-201ENSMUST00000083594 82 ntBASIC1.62□□□□□ -2.15
Shroom3Q9QXN0 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.62□□□□□ -2.15
Shroom3Q9QXN0 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
Shroom3Q9QXN0 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Shroom3Q9QXN0 Gm22151-201ENSMUST00000116963 58 ntBASIC1.61□□□□□ -2.15
Shroom3Q9QXN0 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Shroom3Q9QXN0 Gm25887-201ENSMUST00000157777 84 ntBASIC1.61□□□□□ -2.15
Shroom3Q9QXN0 Gm42960-201ENSMUST00000202160 241 ntBASIC1.61□□□□□ -2.15
Shroom3Q9QXN0 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.61□□□□□ -2.15
Shroom3Q9QXN0 Gm6109-201ENSMUST00000223297 348 ntBASIC1.61□□□□□ -2.15
Shroom3Q9QXN0 Mir34a-201ENSMUST00000083559 102 ntBASIC1.61□□□□□ -2.15
Shroom3Q9QXN0 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.61□□□□□ -2.15
Shroom3Q9QXN0 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Shroom3Q9QXN0 Gm26421-201ENSMUST00000104279 132 ntBASIC1.61□□□□□ -2.15
Shroom3Q9QXN0 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.61□□□□□ -2.15
Shroom3Q9QXN0 Mir6379-201ENSMUST00000183392 115 ntBASIC1.61□□□□□ -2.15
Shroom3Q9QXN0 mt-Ts2-201ENSMUST00000082416 59 ntBASIC1.61□□□□□ -2.15
Shroom3Q9QXN0 Mir30d-201ENSMUST00000083503 82 ntBASIC1.61□□□□□ -2.15
Shroom3Q9QXN0 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Mir301b-201ENSMUST00000102333 97 ntBASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Gm26420-201ENSMUST00000104273 103 ntBASIC1.6□□□□□ -2.15
Shroom3Q9QXN0 Gm23336-201ENSMUST00000117023 123 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 183.7 ms