Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.86□□□□□ -2.27
Cpsf3Q9QXK7 Gm22738-201ENSMUST00000083440 147 ntBASIC0.86□□□□□ -2.27
Cpsf3Q9QXK7 Gm25968-201ENSMUST00000157167 100 ntBASIC0.85□□□□□ -2.27
Cpsf3Q9QXK7 Gm22557-201ENSMUST00000157804 102 ntBASIC0.85□□□□□ -2.27
Cpsf3Q9QXK7 Gm23852-201ENSMUST00000158376 77 ntBASIC0.85□□□□□ -2.27
Cpsf3Q9QXK7 Gm26360-201ENSMUST00000158872 103 ntBASIC0.85□□□□□ -2.27
Cpsf3Q9QXK7 Gm16307-201ENSMUST00000161269 210 ntBASIC0.85□□□□□ -2.27
Cpsf3Q9QXK7 Gm25241-201ENSMUST00000174909 84 ntBASIC0.85□□□□□ -2.27
Cpsf3Q9QXK7 Gm26217-201ENSMUST00000175212 84 ntBASIC0.85□□□□□ -2.27
Cpsf3Q9QXK7 Mir6377-201ENSMUST00000183760 114 ntBASIC0.85□□□□□ -2.27
Cpsf3Q9QXK7 Gm27694-201ENSMUST00000184740 86 ntBASIC0.85□□□□□ -2.27
Cpsf3Q9QXK7 Snord32a-201ENSMUST00000083285 83 ntBASIC0.85□□□□□ -2.27
Cpsf3Q9QXK7 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.85□□□□□ -2.27
Cpsf3Q9QXK7 Gm22673-201ENSMUST00000104415 131 ntBASIC0.84□□□□□ -2.27
Cpsf3Q9QXK7 Gm24379-201ENSMUST00000122695 86 ntBASIC0.84□□□□□ -2.27
Cpsf3Q9QXK7 Gm25882-201ENSMUST00000157784 85 ntBASIC0.84□□□□□ -2.27
Cpsf3Q9QXK7 Gm27285-201ENSMUST00000183875 127 ntBASIC0.84□□□□□ -2.27
Cpsf3Q9QXK7 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.84□□□□□ -2.27
Cpsf3Q9QXK7 Gm26204-201ENSMUST00000082906 107 ntBASIC0.84□□□□□ -2.27
Cpsf3Q9QXK7 Gm24616-201ENSMUST00000083274 139 ntBASIC0.84□□□□□ -2.27
Cpsf3Q9QXK7 Gm24579-201ENSMUST00000103964 144 ntBASIC0.83□□□□□ -2.28
Cpsf3Q9QXK7 Gm22544-201ENSMUST00000104349 127 ntBASIC0.83□□□□□ -2.28
Cpsf3Q9QXK7 Gm22482-201ENSMUST00000122563 359 ntBASIC0.83□□□□□ -2.28
Cpsf3Q9QXK7 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.83□□□□□ -2.28
Cpsf3Q9QXK7 Gm26358-201ENSMUST00000158215 97 ntBASIC0.83□□□□□ -2.28
Cpsf3Q9QXK7 Gm22612-201ENSMUST00000158293 101 ntBASIC0.83□□□□□ -2.28
Cpsf3Q9QXK7 Gm22476-201ENSMUST00000158902 100 ntBASIC0.83□□□□□ -2.28
Cpsf3Q9QXK7 Gm44308-201ENSMUST00000197080 99 ntBASIC0.83□□□□□ -2.28
Cpsf3Q9QXK7 Mir302d-201ENSMUST00000083513 66 ntBASIC0.83□□□□□ -2.28
Cpsf3Q9QXK7 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Cpsf3Q9QXK7 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Cpsf3Q9QXK7 Mir709-201ENSMUST00000102190 88 ntBASIC0.82□□□□□ -2.28
Cpsf3Q9QXK7 Gm25274-201ENSMUST00000104296 135 ntBASIC0.82□□□□□ -2.28
Cpsf3Q9QXK7 Gm25985-201ENSMUST00000122677 107 ntBASIC0.82□□□□□ -2.28
Cpsf3Q9QXK7 Gm38323-201ENSMUST00000192450 210 ntBASIC0.82□□□□□ -2.28
Cpsf3Q9QXK7 Gm26123-201ENSMUST00000083363 135 ntBASIC0.82□□□□□ -2.28
Cpsf3Q9QXK7 Mir695-201ENSMUST00000102261 109 ntBASIC0.81□□□□□ -2.28
Cpsf3Q9QXK7 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Cpsf3Q9QXK7 Gm23772-201ENSMUST00000104433 102 ntBASIC0.81□□□□□ -2.28
Cpsf3Q9QXK7 Gm25544-201ENSMUST00000122676 120 ntBASIC0.81□□□□□ -2.28
Cpsf3Q9QXK7 Gm25769-201ENSMUST00000158569 127 ntBASIC0.81□□□□□ -2.28
Cpsf3Q9QXK7 Mir15a-201ENSMUST00000175266 84 ntBASIC0.81□□□□□ -2.28
Cpsf3Q9QXK7 Gm22801-201ENSMUST00000175624 84 ntBASIC0.81□□□□□ -2.28
Cpsf3Q9QXK7 Gm27465-201ENSMUST00000184290 91 ntBASIC0.81□□□□□ -2.28
Cpsf3Q9QXK7 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.81□□□□□ -2.28
Cpsf3Q9QXK7 Gm23735-201ENSMUST00000082551 134 ntBASIC0.81□□□□□ -2.28
Cpsf3Q9QXK7 Gm22689-201ENSMUST00000102452 110 ntBASIC0.8□□□□□ -2.28
Cpsf3Q9QXK7 Gm25611-201ENSMUST00000104017 133 ntBASIC0.8□□□□□ -2.28
Cpsf3Q9QXK7 Gm26420-201ENSMUST00000104273 103 ntBASIC0.8□□□□□ -2.28
Cpsf3Q9QXK7 Gm22999-201ENSMUST00000157082 88 ntBASIC0.8□□□□□ -2.28
Cpsf3Q9QXK7 Gm24250-201ENSMUST00000157320 135 ntBASIC0.8□□□□□ -2.28
Cpsf3Q9QXK7 Gm22946-201ENSMUST00000158558 82 ntBASIC0.8□□□□□ -2.28
Cpsf3Q9QXK7 Mir3109-201ENSMUST00000175301 88 ntBASIC0.8□□□□□ -2.28
Cpsf3Q9QXK7 Gm23770-201ENSMUST00000178009 108 ntBASIC0.8□□□□□ -2.28
Cpsf3Q9QXK7 Gm22832-201ENSMUST00000178022 108 ntBASIC0.8□□□□□ -2.28
Cpsf3Q9QXK7 Gm23863-201ENSMUST00000178265 108 ntBASIC0.8□□□□□ -2.28
Cpsf3Q9QXK7 Gm24828-201ENSMUST00000178507 108 ntBASIC0.8□□□□□ -2.28
Cpsf3Q9QXK7 Gm23052-201ENSMUST00000178633 108 ntBASIC0.8□□□□□ -2.28
Cpsf3Q9QXK7 Gm25729-201ENSMUST00000179050 108 ntBASIC0.8□□□□□ -2.28
Cpsf3Q9QXK7 Gm25359-201ENSMUST00000179315 108 ntBASIC0.8□□□□□ -2.28
Cpsf3Q9QXK7 Gm22624-201ENSMUST00000179913 108 ntBASIC0.8□□□□□ -2.28
Cpsf3Q9QXK7 Gm44462-201ENSMUST00000199696 129 ntBASIC0.8□□□□□ -2.28
Cpsf3Q9QXK7 Gm26338-201ENSMUST00000102372 110 ntBASIC0.79□□□□□ -2.28
Cpsf3Q9QXK7 Snord70-201ENSMUST00000104157 87 ntBASIC0.79□□□□□ -2.28
Cpsf3Q9QXK7 Gm24509-201ENSMUST00000157086 101 ntBASIC0.79□□□□□ -2.28
Cpsf3Q9QXK7 Gm25358-201ENSMUST00000157189 101 ntBASIC0.79□□□□□ -2.28
Cpsf3Q9QXK7 Gm25364-201ENSMUST00000158851 107 ntBASIC0.79□□□□□ -2.28
Cpsf3Q9QXK7 Gm20386-201ENSMUST00000174010 132 ntBASIC0.79□□□□□ -2.28
Cpsf3Q9QXK7 Mir3079-201ENSMUST00000175428 90 ntBASIC0.79□□□□□ -2.28
Cpsf3Q9QXK7 Gm22887-201ENSMUST00000178586 107 ntBASIC0.79□□□□□ -2.28
Cpsf3Q9QXK7 Gm37116-201ENSMUST00000195161 147 ntBASIC0.79□□□□□ -2.28
Cpsf3Q9QXK7 DQ267101-201ENSMUST00000082562 73 ntBASIC0.79□□□□□ -2.28
Cpsf3Q9QXK7 Gm23461-201ENSMUST00000083265 107 ntBASIC0.79□□□□□ -2.28
Cpsf3Q9QXK7 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.79□□□□□ -2.28
Cpsf3Q9QXK7 Gm22576-201ENSMUST00000083733 104 ntBASIC0.79□□□□□ -2.28
Cpsf3Q9QXK7 Mir532-201ENSMUST00000093630 96 ntBASIC0.79□□□□□ -2.28
Cpsf3Q9QXK7 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.78□□□□□ -2.28
Cpsf3Q9QXK7 Gm38113-201ENSMUST00000193704 201 ntBASIC0.78□□□□□ -2.28
Cpsf3Q9QXK7 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.78□□□□□ -2.28
Cpsf3Q9QXK7 Mir201-201ENSMUST00000083470 66 ntBASIC0.78□□□□□ -2.28
Cpsf3Q9QXK7 Mir489-201ENSMUST00000093599 107 ntBASIC0.78□□□□□ -2.28
Cpsf3Q9QXK7 Gm25170-201ENSMUST00000104191 129 ntBASIC0.77□□□□□ -2.29
Cpsf3Q9QXK7 Snord71-201ENSMUST00000104361 85 ntBASIC0.77□□□□□ -2.29
Cpsf3Q9QXK7 Gm22148-201ENSMUST00000104445 107 ntBASIC0.77□□□□□ -2.29
Cpsf3Q9QXK7 Gm16546-201ENSMUST00000159442 355 ntBASIC0.77□□□□□ -2.29
Cpsf3Q9QXK7 Gm24415-201ENSMUST00000180218 107 ntBASIC0.77□□□□□ -2.29
Cpsf3Q9QXK7 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
Cpsf3Q9QXK7 Gm8508-201ENSMUST00000061226 363 ntBASIC0.77□□□□□ -2.29
Cpsf3Q9QXK7 Mir471-201ENSMUST00000093596 67 ntBASIC0.77□□□□□ -2.29
Cpsf3Q9QXK7 Mir500-201ENSMUST00000093600 92 ntBASIC0.77□□□□□ -2.29
Cpsf3Q9QXK7 Gm25565-201ENSMUST00000104605 105 ntBASIC0.76□□□□□ -2.29
Cpsf3Q9QXK7 Gm26274-201ENSMUST00000157103 321 ntBASIC0.76□□□□□ -2.29
Cpsf3Q9QXK7 Gm23080-201ENSMUST00000157846 103 ntBASIC0.76□□□□□ -2.29
Cpsf3Q9QXK7 Mir1933-201ENSMUST00000158930 88 ntBASIC0.76□□□□□ -2.29
Cpsf3Q9QXK7 Gm37624-201ENSMUST00000193751 219 ntBASIC0.76□□□□□ -2.29
Cpsf3Q9QXK7 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC0.76□□□□□ -2.29
Cpsf3Q9QXK7 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.76□□□□□ -2.29
Cpsf3Q9QXK7 Mir362-201ENSMUST00000093592 65 ntBASIC0.76□□□□□ -2.29
Cpsf3Q9QXK7 Gm22332-201ENSMUST00000158072 126 ntBASIC0.75□□□□□ -2.29
Cpsf3Q9QXK7 Gm22621-201ENSMUST00000179678 74 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 151.1 ms