Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.59□□□□□ -2.31
Scn4aQ9ER60 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.59□□□□□ -2.31
Scn4aQ9ER60 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.59□□□□□ -2.31
Scn4aQ9ER60 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.59□□□□□ -2.31
Scn4aQ9ER60 Gm22302-201ENSMUST00000082657 106 ntBASIC0.59□□□□□ -2.31
Scn4aQ9ER60 Gm24121-201ENSMUST00000102029 106 ntBASIC0.59□□□□□ -2.32
Scn4aQ9ER60 Gm22757-201ENSMUST00000102279 96 ntBASIC0.59□□□□□ -2.32
Scn4aQ9ER60 Gm14792-201ENSMUST00000119725 258 ntBASIC0.59□□□□□ -2.32
Scn4aQ9ER60 Gm12686-201ENSMUST00000120546 397 ntBASIC0.59□□□□□ -2.32
Scn4aQ9ER60 Gm22675-201ENSMUST00000158430 104 ntBASIC0.59□□□□□ -2.32
Scn4aQ9ER60 Mir1961-201ENSMUST00000158643 112 ntBASIC0.59□□□□□ -2.32
Scn4aQ9ER60 Gm24547-201ENSMUST00000158649 149 ntBASIC0.59□□□□□ -2.32
Scn4aQ9ER60 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.59□□□□□ -2.32
Scn4aQ9ER60 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.59□□□□□ -2.32
Scn4aQ9ER60 Gm44828-201ENSMUST00000203745 106 ntBASIC0.59□□□□□ -2.32
Scn4aQ9ER60 Gm19790-201ENSMUST00000214414 251 ntBASIC0.59□□□□□ -2.32
Scn4aQ9ER60 Mir547-201ENSMUST00000102051 78 ntBASIC0.58□□□□□ -2.32
Scn4aQ9ER60 Gm23375-201ENSMUST00000175407 83 ntBASIC0.58□□□□□ -2.32
Scn4aQ9ER60 Mir6377-201ENSMUST00000183760 114 ntBASIC0.58□□□□□ -2.32
Scn4aQ9ER60 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.58□□□□□ -2.32
Scn4aQ9ER60 Gm25509-201ENSMUST00000116985 106 ntBASIC0.57□□□□□ -2.32
Scn4aQ9ER60 Gm11388-201ENSMUST00000120908 159 ntBASIC0.57□□□□□ -2.32
Scn4aQ9ER60 Gm23219-201ENSMUST00000158123 87 ntBASIC0.57□□□□□ -2.32
Scn4aQ9ER60 Gm22801-201ENSMUST00000175624 84 ntBASIC0.57□□□□□ -2.32
Scn4aQ9ER60 Gm6003-201ENSMUST00000187903 463 ntBASIC0.57□□□□□ -2.32
Scn4aQ9ER60 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Scn4aQ9ER60 Mir669l-201ENSMUST00000103771 98 ntBASIC0.57□□□□□ -2.32
Scn4aQ9ER60 Gm24015-201ENSMUST00000157725 232 ntBASIC0.57□□□□□ -2.32
Scn4aQ9ER60 Gm26090-201ENSMUST00000157897 128 ntBASIC0.57□□□□□ -2.32
Scn4aQ9ER60 Gm22767-201ENSMUST00000158365 165 ntBASIC0.57□□□□□ -2.32
Scn4aQ9ER60 Gm26402-201ENSMUST00000158499 113 ntBASIC0.57□□□□□ -2.32
Scn4aQ9ER60 Gm24634-201ENSMUST00000158672 107 ntBASIC0.57□□□□□ -2.32
Scn4aQ9ER60 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.57□□□□□ -2.32
Scn4aQ9ER60 Gm26338-201ENSMUST00000102372 110 ntBASIC0.56□□□□□ -2.32
Scn4aQ9ER60 Mir881-201ENSMUST00000104844 78 ntBASIC0.56□□□□□ -2.32
Scn4aQ9ER60 Gm12771-201ENSMUST00000120246 135 ntBASIC0.56□□□□□ -2.32
Scn4aQ9ER60 Gm24747-201ENSMUST00000157835 87 ntBASIC0.56□□□□□ -2.32
Scn4aQ9ER60 Gm24963-201ENSMUST00000157916 144 ntBASIC0.56□□□□□ -2.32
Scn4aQ9ER60 Gm38364-201ENSMUST00000191814 179 ntBASIC0.56□□□□□ -2.32
Scn4aQ9ER60 Mir362-201ENSMUST00000093592 65 ntBASIC0.55□□□□□ -2.32
Scn4aQ9ER60 Snord100-201ENSMUST00000116836 74 ntBASIC0.54□□□□□ -2.32
Scn4aQ9ER60 Gm26326-201ENSMUST00000083070 129 ntBASIC0.54□□□□□ -2.32
Scn4aQ9ER60 Snord69-201ENSMUST00000104024 80 ntBASIC0.54□□□□□ -2.32
Scn4aQ9ER60 Gm24867-201ENSMUST00000104161 107 ntBASIC0.54□□□□□ -2.32
Scn4aQ9ER60 Gm14626-201ENSMUST00000117619 216 ntBASIC0.54□□□□□ -2.32
Scn4aQ9ER60 Gm11936-201ENSMUST00000118323 160 ntBASIC0.54□□□□□ -2.32
Scn4aQ9ER60 Gm24385-201ENSMUST00000122694 350 ntBASIC0.54□□□□□ -2.32
Scn4aQ9ER60 Gm24728-201ENSMUST00000158226 125 ntBASIC0.54□□□□□ -2.32
Scn4aQ9ER60 Gm24678-201ENSMUST00000158756 104 ntBASIC0.54□□□□□ -2.32
Scn4aQ9ER60 Mir191-201ENSMUST00000196210 74 ntBASIC0.54□□□□□ -2.32
Scn4aQ9ER60 Gm23679-201ENSMUST00000083161 119 ntBASIC0.54□□□□□ -2.32
Scn4aQ9ER60 Mir710-201ENSMUST00000102088 110 ntBASIC0.53□□□□□ -2.32
Scn4aQ9ER60 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.53□□□□□ -2.32
Scn4aQ9ER60 Gm23036-201ENSMUST00000157885 99 ntBASIC0.53□□□□□ -2.32
Scn4aQ9ER60 Gm27476-201ENSMUST00000183366 104 ntBASIC0.53□□□□□ -2.32
Scn4aQ9ER60 Gm36956-201ENSMUST00000193830 214 ntBASIC0.53□□□□□ -2.32
Scn4aQ9ER60 Gm14883-201ENSMUST00000120179 157 ntBASIC0.52□□□□□ -2.33
Scn4aQ9ER60 Gm25235-201ENSMUST00000179933 107 ntBASIC0.52□□□□□ -2.33
Scn4aQ9ER60 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.52□□□□□ -2.33
Scn4aQ9ER60 Gm45859-201ENSMUST00000212794 214 ntBASIC0.52□□□□□ -2.33
Scn4aQ9ER60 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.52□□□□□ -2.33
Scn4aQ9ER60 AC154245.1-201ENSMUST00000224615 601 ntBASIC0.52□□□□□ -2.33
Scn4aQ9ER60 Snord89-201ENSMUST00000104516 110 ntBASIC0.52□□□□□ -2.33
Scn4aQ9ER60 Gm23987-201ENSMUST00000117039 129 ntBASIC0.52□□□□□ -2.33
Scn4aQ9ER60 Gm13797-201ENSMUST00000121792 120 ntBASIC0.52□□□□□ -2.33
Scn4aQ9ER60 Gm28020-201ENSMUST00000157739 67 ntBASIC0.52□□□□□ -2.33
Scn4aQ9ER60 Gm27585-201ENSMUST00000183717 199 ntBASIC0.52□□□□□ -2.33
Scn4aQ9ER60 Gm44488-201ENSMUST00000199467 119 ntBASIC0.52□□□□□ -2.33
Scn4aQ9ER60 Mir216a-201ENSMUST00000083605 72 ntBASIC0.52□□□□□ -2.33
Scn4aQ9ER60 Mir466p-201ENSMUST00000103925 89 ntBASIC0.51□□□□□ -2.33
Scn4aQ9ER60 Gm12837-201ENSMUST00000120131 373 ntBASIC0.51□□□□□ -2.33
Scn4aQ9ER60 Gm23853-201ENSMUST00000158375 104 ntBASIC0.51□□□□□ -2.33
Scn4aQ9ER60 Gm44948-201ENSMUST00000209050 149 ntBASIC0.51□□□□□ -2.33
Scn4aQ9ER60 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.51□□□□□ -2.33
Scn4aQ9ER60 Gm22815-201ENSMUST00000157451 62 ntBASIC0.5□□□□□ -2.33
Scn4aQ9ER60 Gm22557-201ENSMUST00000157804 102 ntBASIC0.5□□□□□ -2.33
Scn4aQ9ER60 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.5□□□□□ -2.33
Scn4aQ9ER60 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.5□□□□□ -2.33
Scn4aQ9ER60 Gm6952-201ENSMUST00000118629 159 ntBASIC0.5□□□□□ -2.33
Scn4aQ9ER60 Mir466m-201ENSMUST00000175052 84 ntBASIC0.5□□□□□ -2.33
Scn4aQ9ER60 Gm27905-201ENSMUST00000184005 207 ntBASIC0.5□□□□□ -2.33
Scn4aQ9ER60 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.5□□□□□ -2.33
Scn4aQ9ER60 Snord19-201ENSMUST00000104609 76 ntBASIC0.49□□□□□ -2.33
Scn4aQ9ER60 Gm26279-201ENSMUST00000157095 102 ntBASIC0.49□□□□□ -2.33
Scn4aQ9ER60 Gm25772-201ENSMUST00000158574 56 ntBASIC0.49□□□□□ -2.33
Scn4aQ9ER60 Gm16307-201ENSMUST00000161269 210 ntBASIC0.49□□□□□ -2.33
Scn4aQ9ER60 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.49□□□□□ -2.33
Scn4aQ9ER60 Gm25138-201ENSMUST00000083248 136 ntBASIC0.49□□□□□ -2.33
Scn4aQ9ER60 Gm22738-201ENSMUST00000083440 147 ntBASIC0.49□□□□□ -2.33
Scn4aQ9ER60 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.49□□□□□ -2.33
Scn4aQ9ER60 Gm25895-201ENSMUST00000083714 100 ntBASIC0.49□□□□□ -2.33
Scn4aQ9ER60 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.49□□□□□ -2.33
Scn4aQ9ER60 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.49□□□□□ -2.33
Scn4aQ9ER60 Mir1933-201ENSMUST00000158930 88 ntBASIC0.48□□□□□ -2.33
Scn4aQ9ER60 Gm23047-201ENSMUST00000177661 94 ntBASIC0.48□□□□□ -2.33
Scn4aQ9ER60 Gm43432-201ENSMUST00000196352 121 ntBASIC0.48□□□□□ -2.33
Scn4aQ9ER60 Gm8508-201ENSMUST00000061226 363 ntBASIC0.48□□□□□ -2.33
Scn4aQ9ER60 Mir500-201ENSMUST00000093600 92 ntBASIC0.48□□□□□ -2.33
Scn4aQ9ER60 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Scn4aQ9ER60 Mir541-201ENSMUST00000102097 90 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 146.8 ms