Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm17919-201ENSMUST00000173344 312 ntBASIC0.24□□□□□ -2.37
Cdc40Q9DC48 Gm25241-201ENSMUST00000174909 84 ntBASIC0.24□□□□□ -2.37
Cdc40Q9DC48 Gm26217-201ENSMUST00000175212 84 ntBASIC0.24□□□□□ -2.37
Cdc40Q9DC48 Gm27475-201ENSMUST00000183420 61 ntBASIC0.24□□□□□ -2.37
Cdc40Q9DC48 Mir7065-201ENSMUST00000185110 61 ntBASIC0.24□□□□□ -2.37
Cdc40Q9DC48 Gm6003-201ENSMUST00000187903 463 ntBASIC0.24□□□□□ -2.37
Cdc40Q9DC48 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Cdc40Q9DC48 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Cdc40Q9DC48 Gm13922-201ENSMUST00000119505 156 ntBASIC0.23□□□□□ -2.37
Cdc40Q9DC48 Gm22216-201ENSMUST00000157557 114 ntBASIC0.23□□□□□ -2.37
Cdc40Q9DC48 Gm24006-201ENSMUST00000158462 132 ntBASIC0.23□□□□□ -2.37
Cdc40Q9DC48 Gm25718-201ENSMUST00000158632 118 ntBASIC0.23□□□□□ -2.37
Cdc40Q9DC48 Gm24549-201ENSMUST00000158647 139 ntBASIC0.23□□□□□ -2.37
Cdc40Q9DC48 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.23□□□□□ -2.37
Cdc40Q9DC48 Mir6390-201ENSMUST00000184405 129 ntBASIC0.23□□□□□ -2.37
Cdc40Q9DC48 Gm25814-201ENSMUST00000082754 107 ntBASIC0.23□□□□□ -2.37
Cdc40Q9DC48 Gm23451-201ENSMUST00000083328 122 ntBASIC0.23□□□□□ -2.37
Cdc40Q9DC48 Gm25375-201ENSMUST00000158157 135 ntBASIC0.22□□□□□ -2.37
Cdc40Q9DC48 Gm22434-201ENSMUST00000158549 122 ntBASIC0.22□□□□□ -2.37
Cdc40Q9DC48 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.22□□□□□ -2.37
Cdc40Q9DC48 Gm22686-201ENSMUST00000082847 100 ntBASIC0.22□□□□□ -2.37
Cdc40Q9DC48 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.22□□□□□ -2.37
Cdc40Q9DC48 Gm22051-201ENSMUST00000117002 127 ntBASIC0.21□□□□□ -2.38
Cdc40Q9DC48 Gm23989-201ENSMUST00000117030 66 ntBASIC0.21□□□□□ -2.38
Cdc40Q9DC48 Gm11204-201ENSMUST00000122438 147 ntBASIC0.21□□□□□ -2.38
Cdc40Q9DC48 Gm22239-201ENSMUST00000175220 103 ntBASIC0.21□□□□□ -2.38
Cdc40Q9DC48 Gm27402-201ENSMUST00000183890 120 ntBASIC0.21□□□□□ -2.38
Cdc40Q9DC48 Mir3970-201ENSMUST00000199287 90 ntBASIC0.21□□□□□ -2.38
Cdc40Q9DC48 Gm26123-201ENSMUST00000083363 135 ntBASIC0.21□□□□□ -2.38
Cdc40Q9DC48 Gm22753-201ENSMUST00000083657 107 ntBASIC0.21□□□□□ -2.38
Cdc40Q9DC48 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
Cdc40Q9DC48 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.2□□□□□ -2.38
Cdc40Q9DC48 Gm24728-201ENSMUST00000158226 125 ntBASIC0.2□□□□□ -2.38
Cdc40Q9DC48 Gm23180-201ENSMUST00000158686 125 ntBASIC0.2□□□□□ -2.38
Cdc40Q9DC48 Gm22466-201ENSMUST00000175278 69 ntBASIC0.2□□□□□ -2.38
Cdc40Q9DC48 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.2□□□□□ -2.38
Cdc40Q9DC48 Gm24030-201ENSMUST00000083931 164 ntBASIC0.2□□□□□ -2.38
Cdc40Q9DC48 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.19□□□□□ -2.38
Cdc40Q9DC48 Gm11388-201ENSMUST00000120908 159 ntBASIC0.19□□□□□ -2.38
Cdc40Q9DC48 Gm23994-201ENSMUST00000158059 88 ntBASIC0.19□□□□□ -2.38
Cdc40Q9DC48 Gm25300-201ENSMUST00000175284 84 ntBASIC0.19□□□□□ -2.38
Cdc40Q9DC48 Gm25464-201ENSMUST00000175481 107 ntBASIC0.19□□□□□ -2.38
Cdc40Q9DC48 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.19□□□□□ -2.38
Cdc40Q9DC48 Mir6951-201ENSMUST00000183910 75 ntBASIC0.19□□□□□ -2.38
Cdc40Q9DC48 Mir6365-201ENSMUST00000183990 101 ntBASIC0.19□□□□□ -2.38
Cdc40Q9DC48 Gm44457-201ENSMUST00000198109 76 ntBASIC0.19□□□□□ -2.38
Cdc40Q9DC48 Gm25135-201ENSMUST00000082648 143 ntBASIC0.19□□□□□ -2.38
Cdc40Q9DC48 Gm24833-201ENSMUST00000116775 120 ntBASIC0.18□□□□□ -2.38
Cdc40Q9DC48 Gm6952-201ENSMUST00000118629 159 ntBASIC0.18□□□□□ -2.38
Cdc40Q9DC48 Gm13345-201ENSMUST00000121928 228 ntBASIC0.18□□□□□ -2.38
Cdc40Q9DC48 Gm25720-201ENSMUST00000157503 105 ntBASIC0.18□□□□□ -2.38
Cdc40Q9DC48 Gm25444-201ENSMUST00000158999 113 ntBASIC0.18□□□□□ -2.38
Cdc40Q9DC48 Gm27717-201ENSMUST00000183933 151 ntBASIC0.18□□□□□ -2.38
Cdc40Q9DC48 Gm27607-201ENSMUST00000185162 122 ntBASIC0.18□□□□□ -2.38
Cdc40Q9DC48 Gm38019-201ENSMUST00000195133 380 ntBASIC0.18□□□□□ -2.38
Cdc40Q9DC48 Gm44373-201ENSMUST00000196112 169 ntBASIC0.18□□□□□ -2.38
Cdc40Q9DC48 Gm43944-201ENSMUST00000205220 120 ntBASIC0.18□□□□□ -2.38
Cdc40Q9DC48 Gm45859-201ENSMUST00000212794 214 ntBASIC0.18□□□□□ -2.38
Cdc40Q9DC48 Gm19572-201ENSMUST00000214326 338 ntBASIC0.18□□□□□ -2.38
Cdc40Q9DC48 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.18□□□□□ -2.38
Cdc40Q9DC48 Gm24929-201ENSMUST00000083403 139 ntBASIC0.18□□□□□ -2.38
Cdc40Q9DC48 Gm22576-201ENSMUST00000083733 104 ntBASIC0.18□□□□□ -2.38
Cdc40Q9DC48 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.17□□□□□ -2.38
Cdc40Q9DC48 Gm25111-201ENSMUST00000116686 147 ntBASIC0.17□□□□□ -2.38
Cdc40Q9DC48 Gm25494-201ENSMUST00000158143 100 ntBASIC0.17□□□□□ -2.38
Cdc40Q9DC48 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
Cdc40Q9DC48 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.17□□□□□ -2.38
Cdc40Q9DC48 Gm25611-201ENSMUST00000104017 133 ntBASIC0.16□□□□□ -2.38
Cdc40Q9DC48 Gm23531-201ENSMUST00000104567 68 ntBASIC0.16□□□□□ -2.38
Cdc40Q9DC48 Gm22790-201ENSMUST00000157229 129 ntBASIC0.16□□□□□ -2.38
Cdc40Q9DC48 Gm22088-201ENSMUST00000158341 117 ntBASIC0.16□□□□□ -2.38
Cdc40Q9DC48 Mir669k-201ENSMUST00000177742 127 ntBASIC0.16□□□□□ -2.38
Cdc40Q9DC48 Gm25935-201ENSMUST00000178746 107 ntBASIC0.16□□□□□ -2.38
Cdc40Q9DC48 Gm25673-201ENSMUST00000179957 127 ntBASIC0.16□□□□□ -2.38
Cdc40Q9DC48 Mir7010-201ENSMUST00000183464 63 ntBASIC0.16□□□□□ -2.38
Cdc40Q9DC48 Mir6369-201ENSMUST00000183772 106 ntBASIC0.16□□□□□ -2.38
Cdc40Q9DC48 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.16□□□□□ -2.38
Cdc40Q9DC48 Gm24867-201ENSMUST00000104161 107 ntBASIC0.15□□□□□ -2.39
Cdc40Q9DC48 Mir881-201ENSMUST00000104844 78 ntBASIC0.15□□□□□ -2.39
Cdc40Q9DC48 Gm23821-201ENSMUST00000158738 106 ntBASIC0.15□□□□□ -2.39
Cdc40Q9DC48 Gm27672-201ENSMUST00000183751 204 ntBASIC0.15□□□□□ -2.39
Cdc40Q9DC48 Mir7229-201ENSMUST00000197062 53 ntBASIC0.15□□□□□ -2.39
Cdc40Q9DC48 Gm42795-201ENSMUST00000198847 76 ntBASIC0.15□□□□□ -2.39
Cdc40Q9DC48 Gm3702-201ENSMUST00000211754 346 ntBASIC0.15□□□□□ -2.39
Cdc40Q9DC48 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.15□□□□□ -2.39
Cdc40Q9DC48 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.14□□□□□ -2.39
Cdc40Q9DC48 Gm25848-201ENSMUST00000116790 144 ntBASIC0.14□□□□□ -2.39
Cdc40Q9DC48 Mir669d-2-201ENSMUST00000116854 86 ntBASIC0.14□□□□□ -2.39
Cdc40Q9DC48 Gm11322-201ENSMUST00000118095 435 ntBASIC0.14□□□□□ -2.39
Cdc40Q9DC48 Gm12686-201ENSMUST00000120546 397 ntBASIC0.14□□□□□ -2.39
Cdc40Q9DC48 Gm26026-201ENSMUST00000122726 123 ntBASIC0.14□□□□□ -2.39
Cdc40Q9DC48 Gm22999-201ENSMUST00000157082 88 ntBASIC0.14□□□□□ -2.39
Cdc40Q9DC48 Gm19790-201ENSMUST00000214414 251 ntBASIC0.14□□□□□ -2.39
Cdc40Q9DC48 AC109214.2-201ENSMUST00000220089 358 ntBASIC0.14□□□□□ -2.39
Cdc40Q9DC48 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.14□□□□□ -2.39
Cdc40Q9DC48 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.14□□□□□ -2.39
Cdc40Q9DC48 Scarna9-201ENSMUST00000104318 70 ntBASIC0.13□□□□□ -2.39
Cdc40Q9DC48 Gm14039-201ENSMUST00000118705 101 ntBASIC0.13□□□□□ -2.39
Cdc40Q9DC48 Gm23278-201ENSMUST00000157911 143 ntBASIC0.13□□□□□ -2.39
Cdc40Q9DC48 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.13□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 291.3 ms