Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm3702-201ENSMUST00000211754 346 ntBASIC0.08□□□□□ -2.4
Ccdc3Q9D6Y1 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.08□□□□□ -2.4
Ccdc3Q9D6Y1 Gm16186-201ENSMUST00000120132 216 ntBASIC0.07□□□□□ -2.4
Ccdc3Q9D6Y1 Gm23655-201ENSMUST00000122627 105 ntBASIC0.07□□□□□ -2.4
Ccdc3Q9D6Y1 Gm25235-201ENSMUST00000179933 107 ntBASIC0.07□□□□□ -2.4
Ccdc3Q9D6Y1 Mir7229-201ENSMUST00000197062 53 ntBASIC0.07□□□□□ -2.4
Ccdc3Q9D6Y1 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.07□□□□□ -2.4
Ccdc3Q9D6Y1 Mir141-201ENSMUST00000083540 72 ntBASIC0.07□□□□□ -2.4
Ccdc3Q9D6Y1 Gm24030-201ENSMUST00000083931 164 ntBASIC0.07□□□□□ -2.4
Ccdc3Q9D6Y1 Gm23466-201ENSMUST00000157133 106 ntBASIC0.06□□□□□ -2.4
Ccdc3Q9D6Y1 Gm24903-201ENSMUST00000158131 126 ntBASIC0.06□□□□□ -2.4
Ccdc3Q9D6Y1 Gm25771-201ENSMUST00000158565 144 ntBASIC0.06□□□□□ -2.4
Ccdc3Q9D6Y1 Gm25444-201ENSMUST00000158999 113 ntBASIC0.06□□□□□ -2.4
Ccdc3Q9D6Y1 Gm23002-201ENSMUST00000179221 107 ntBASIC0.06□□□□□ -2.4
Ccdc3Q9D6Y1 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
Ccdc3Q9D6Y1 Gm45313-201ENSMUST00000210584 178 ntBASIC0.06□□□□□ -2.4
Ccdc3Q9D6Y1 Snord95-201ENSMUST00000082846 68 ntBASIC0.06□□□□□ -2.4
Ccdc3Q9D6Y1 Gm26123-201ENSMUST00000083363 135 ntBASIC0.06□□□□□ -2.4
Ccdc3Q9D6Y1 Gm22576-201ENSMUST00000083733 104 ntBASIC0.06□□□□□ -2.4
Ccdc3Q9D6Y1 Gm23749-201ENSMUST00000104223 131 ntBASIC0.05□□□□□ -2.4
Ccdc3Q9D6Y1 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.05□□□□□ -2.4
Ccdc3Q9D6Y1 Gm6952-201ENSMUST00000118629 159 ntBASIC0.05□□□□□ -2.4
Ccdc3Q9D6Y1 Gm25323-201ENSMUST00000122555 103 ntBASIC0.05□□□□□ -2.4
Ccdc3Q9D6Y1 Gm23036-201ENSMUST00000157885 99 ntBASIC0.05□□□□□ -2.4
Ccdc3Q9D6Y1 Gm25494-201ENSMUST00000158143 100 ntBASIC0.05□□□□□ -2.4
Ccdc3Q9D6Y1 Gm25241-201ENSMUST00000174909 84 ntBASIC0.05□□□□□ -2.4
Ccdc3Q9D6Y1 Gm26217-201ENSMUST00000175212 84 ntBASIC0.05□□□□□ -2.4
Ccdc3Q9D6Y1 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
Ccdc3Q9D6Y1 Gm44455-201ENSMUST00000200061 82 ntBASIC0.05□□□□□ -2.4
Ccdc3Q9D6Y1 Gm24460-201ENSMUST00000082731 106 ntBASIC0.05□□□□□ -2.4
Ccdc3Q9D6Y1 Gm25894-201ENSMUST00000083458 75 ntBASIC0.05□□□□□ -2.4
Ccdc3Q9D6Y1 Gm24423-201ENSMUST00000101982 106 ntBASIC0.04□□□□□ -2.4
Ccdc3Q9D6Y1 Gm13922-201ENSMUST00000119505 156 ntBASIC0.04□□□□□ -2.4
Ccdc3Q9D6Y1 Gm11904-201ENSMUST00000120562 248 ntBASIC0.04□□□□□ -2.4
Ccdc3Q9D6Y1 Mir100-201ENSMUST00000175270 80 ntBASIC0.04□□□□□ -2.4
Ccdc3Q9D6Y1 Mir7010-201ENSMUST00000183464 63 ntBASIC0.04□□□□□ -2.4
Ccdc3Q9D6Y1 Mir6369-201ENSMUST00000183772 106 ntBASIC0.04□□□□□ -2.4
Ccdc3Q9D6Y1 Gm6003-201ENSMUST00000187903 463 ntBASIC0.04□□□□□ -2.4
Ccdc3Q9D6Y1 Gm44345-201ENSMUST00000199560 135 ntBASIC0.04□□□□□ -2.4
Ccdc3Q9D6Y1 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.04□□□□□ -2.4
Ccdc3Q9D6Y1 Gm24765-201ENSMUST00000083691 103 ntBASIC0.04□□□□□ -2.4
Ccdc3Q9D6Y1 Gm25512-201ENSMUST00000083863 107 ntBASIC0.04□□□□□ -2.4
Ccdc3Q9D6Y1 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
Ccdc3Q9D6Y1 Gm25611-201ENSMUST00000104017 133 ntBASIC0.03□□□□□ -2.4
Ccdc3Q9D6Y1 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.03□□□□□ -2.4
Ccdc3Q9D6Y1 Gm22479-201ENSMUST00000122566 81 ntBASIC0.03□□□□□ -2.4
Ccdc3Q9D6Y1 Mir6336-201ENSMUST00000183581 130 ntBASIC0.03□□□□□ -2.4
Ccdc3Q9D6Y1 Gm27585-201ENSMUST00000183717 199 ntBASIC0.03□□□□□ -2.4
Ccdc3Q9D6Y1 Gm24762-201ENSMUST00000083689 104 ntBASIC0.03□□□□□ -2.4
Ccdc3Q9D6Y1 Gm10172-201ENSMUST00000085929 558 ntBASIC0.03□□□□□ -2.4
Ccdc3Q9D6Y1 Gm13345-201ENSMUST00000121928 228 ntBASIC0.02□□□□□ -2.41
Ccdc3Q9D6Y1 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.02□□□□□ -2.41
Ccdc3Q9D6Y1 Gm22686-201ENSMUST00000082847 100 ntBASIC0.02□□□□□ -2.41
Ccdc3Q9D6Y1 Scarna9-201ENSMUST00000104318 70 ntBASIC0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Gm14792-201ENSMUST00000119725 258 ntBASIC0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Mir1899-201ENSMUST00000122798 96 ntBASIC0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Gm28001-201ENSMUST00000183561 117 ntBASIC0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Gm37715-201ENSMUST00000193206 235 ntBASIC0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Gm42795-201ENSMUST00000198847 76 ntBASIC0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Gm8508-201ENSMUST00000061226 363 ntBASIC0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Mir200a-201ENSMUST00000083466 90 ntBASIC0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Mir377-201ENSMUST00000083504 68 ntBASIC0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Mir146-201ENSMUST00000083667 65 ntBASIC0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Gm23345-201ENSMUST00000083817 150 ntBASIC0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Mir670-201ENSMUST00000102380 100 ntBASIC0□□□□□ -2.41
Ccdc3Q9D6Y1 Gm22790-201ENSMUST00000157229 129 ntBASIC0□□□□□ -2.41
Ccdc3Q9D6Y1 Gm23219-201ENSMUST00000158123 87 ntBASIC0□□□□□ -2.41
Ccdc3Q9D6Y1 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0□□□□□ -2.41
Ccdc3Q9D6Y1 Mir669k-201ENSMUST00000177742 127 ntBASIC0□□□□□ -2.41
Ccdc3Q9D6Y1 Gm24488-201ENSMUST00000179934 127 ntBASIC0□□□□□ -2.41
Ccdc3Q9D6Y1 Gm25673-201ENSMUST00000179957 127 ntBASIC0□□□□□ -2.41
Ccdc3Q9D6Y1 Gm25701-201ENSMUST00000179988 127 ntBASIC0□□□□□ -2.41
Ccdc3Q9D6Y1 Gm26431-201ENSMUST00000180199 127 ntBASIC0□□□□□ -2.41
Ccdc3Q9D6Y1 Gm42623-201ENSMUST00000197225 379 ntBASIC0□□□□□ -2.41
Ccdc3Q9D6Y1 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0□□□□□ -2.41
Ccdc3Q9D6Y1 Gm26447-201ENSMUST00000082448 129 ntBASIC0□□□□□ -2.41
Ccdc3Q9D6Y1 Gm24929-201ENSMUST00000083403 139 ntBASIC0□□□□□ -2.41
Ccdc3Q9D6Y1 Mir181b-2-201ENSMUST00000083644 89 ntBASIC0□□□□□ -2.41
Ccdc3Q9D6Y1 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.01□□□□□ -2.41
Ccdc3Q9D6Y1 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.01□□□□□ -2.41
Ccdc3Q9D6Y1 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.02□□□□□ -2.41
Ccdc3Q9D6Y1 Gm24867-201ENSMUST00000104161 107 ntBASIC-0.02□□□□□ -2.41
Ccdc3Q9D6Y1 Gm22051-201ENSMUST00000117002 127 ntBASIC-0.02□□□□□ -2.41
Ccdc3Q9D6Y1 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.02□□□□□ -2.41
Ccdc3Q9D6Y1 Gm24006-201ENSMUST00000158462 132 ntBASIC-0.02□□□□□ -2.41
Ccdc3Q9D6Y1 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.02□□□□□ -2.41
Ccdc3Q9D6Y1 Gm24575-201ENSMUST00000175502 77 ntBASIC-0.02□□□□□ -2.41
Ccdc3Q9D6Y1 Gm27747-201ENSMUST00000184707 85 ntBASIC-0.02□□□□□ -2.41
Ccdc3Q9D6Y1 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-0.02□□□□□ -2.41
Ccdc3Q9D6Y1 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.02□□□□□ -2.41
Ccdc3Q9D6Y1 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.02□□□□□ -2.41
Ccdc3Q9D6Y1 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.02□□□□□ -2.41
Ccdc3Q9D6Y1 Mir721-201ENSMUST00000200230 88 ntBASIC-0.02□□□□□ -2.41
Ccdc3Q9D6Y1 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 273.6 ms