Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm26090-201ENSMUST00000157897 128 ntBASIC2.3□□□□□ -2.04
Trim13Q9CYB0 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.3□□□□□ -2.04
Trim13Q9CYB0 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trim13Q9CYB0 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.3□□□□□ -2.04
Trim13Q9CYB0 Gm44807-201ENSMUST00000206115 154 ntBASIC2.3□□□□□ -2.04
Trim13Q9CYB0 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trim13Q9CYB0 Gm11598-201ENSMUST00000119257 357 ntBASIC2.29□□□□□ -2.04
Trim13Q9CYB0 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC2.29□□□□□ -2.04
Trim13Q9CYB0 Gm25322-201ENSMUST00000122556 104 ntBASIC2.29□□□□□ -2.04
Trim13Q9CYB0 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trim13Q9CYB0 Gm23391-201ENSMUST00000157579 104 ntBASIC2.29□□□□□ -2.04
Trim13Q9CYB0 Gm24958-201ENSMUST00000158009 97 ntBASIC2.29□□□□□ -2.04
Trim13Q9CYB0 Gm25371-201ENSMUST00000158162 101 ntBASIC2.29□□□□□ -2.04
Trim13Q9CYB0 Gm23268-201ENSMUST00000175494 78 ntBASIC2.29□□□□□ -2.04
Trim13Q9CYB0 Gm43626-201ENSMUST00000198575 162 ntBASIC2.29□□□□□ -2.04
Trim13Q9CYB0 Gm44526-201ENSMUST00000204664 121 ntBASIC2.29□□□□□ -2.04
Trim13Q9CYB0 Gm25855-201ENSMUST00000082787 72 ntBASIC2.29□□□□□ -2.04
Trim13Q9CYB0 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trim13Q9CYB0 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trim13Q9CYB0 Gm22947-201ENSMUST00000158559 91 ntBASIC2.28□□□□□ -2.04
Trim13Q9CYB0 Gm7258-201ENSMUST00000179317 300 ntBASIC2.28□□□□□ -2.04
Trim13Q9CYB0 Gm43722-201ENSMUST00000196054 124 ntBASIC2.28□□□□□ -2.04
Trim13Q9CYB0 Mir3961-201ENSMUST00000198795 59 ntBASIC2.28□□□□□ -2.04
Trim13Q9CYB0 Gm34314-201ENSMUST00000203622 367 ntBASIC2.28□□□□□ -2.04
Trim13Q9CYB0 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.28□□□□□ -2.04
Trim13Q9CYB0 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.28□□□□□ -2.04
Trim13Q9CYB0 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.28□□□□□ -2.04
Trim13Q9CYB0 Gm25168-201ENSMUST00000104189 132 ntBASIC2.27□□□□□ -2.05
Trim13Q9CYB0 Gm25528-201ENSMUST00000180264 132 ntBASIC2.27□□□□□ -2.05
Trim13Q9CYB0 Gm27505-201ENSMUST00000185071 110 ntBASIC2.27□□□□□ -2.05
Trim13Q9CYB0 Gm6109-201ENSMUST00000223297 348 ntBASIC2.27□□□□□ -2.05
Trim13Q9CYB0 AC159093.2-201ENSMUST00000227881 297 ntBASIC2.27□□□□□ -2.05
Trim13Q9CYB0 Gm24412-201ENSMUST00000083426 109 ntBASIC2.27□□□□□ -2.05
Trim13Q9CYB0 Mir490-201ENSMUST00000093567 84 ntBASIC2.27□□□□□ -2.05
Trim13Q9CYB0 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Trim13Q9CYB0 Gm24868-201ENSMUST00000157265 136 ntBASIC2.26□□□□□ -2.05
Trim13Q9CYB0 Gm24077-201ENSMUST00000158183 136 ntBASIC2.26□□□□□ -2.05
Trim13Q9CYB0 Gm22888-201ENSMUST00000158640 77 ntBASIC2.26□□□□□ -2.05
Trim13Q9CYB0 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Trim13Q9CYB0 Mir6916-201ENSMUST00000184514 63 ntBASIC2.26□□□□□ -2.05
Trim13Q9CYB0 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Trim13Q9CYB0 AC160976.1-201ENSMUST00000215092 148 ntBASIC2.26□□□□□ -2.05
Trim13Q9CYB0 Mir5117-201ENSMUST00000083226 84 ntBASIC2.26□□□□□ -2.05
Trim13Q9CYB0 Gm22743-201ENSMUST00000083445 133 ntBASIC2.26□□□□□ -2.05
Trim13Q9CYB0 Mir301-201ENSMUST00000083655 86 ntBASIC2.26□□□□□ -2.05
Trim13Q9CYB0 Gm23344-201ENSMUST00000083818 68 ntBASIC2.26□□□□□ -2.05
Trim13Q9CYB0 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Trim13Q9CYB0 Gm25611-201ENSMUST00000104017 133 ntBASIC2.25□□□□□ -2.05
Trim13Q9CYB0 Gm23128-201ENSMUST00000104257 132 ntBASIC2.25□□□□□ -2.05
Trim13Q9CYB0 Gm22732-201ENSMUST00000158093 121 ntBASIC2.25□□□□□ -2.05
Trim13Q9CYB0 Gm23128-202ENSMUST00000196578 133 ntBASIC2.25□□□□□ -2.05
Trim13Q9CYB0 Mir7232-201ENSMUST00000197929 74 ntBASIC2.25□□□□□ -2.05
Trim13Q9CYB0 Gm25798-201ENSMUST00000082641 107 ntBASIC2.25□□□□□ -2.05
Trim13Q9CYB0 Gm23299-201ENSMUST00000082708 79 ntBASIC2.25□□□□□ -2.05
Trim13Q9CYB0 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.25□□□□□ -2.05
Trim13Q9CYB0 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.24□□□□□ -2.05
Trim13Q9CYB0 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.24□□□□□ -2.05
Trim13Q9CYB0 Gm22338-201ENSMUST00000157715 129 ntBASIC2.24□□□□□ -2.05
Trim13Q9CYB0 Gm25160-201ENSMUST00000158914 102 ntBASIC2.24□□□□□ -2.05
Trim13Q9CYB0 Gm5900-201ENSMUST00000179862 375 ntBASIC2.24□□□□□ -2.05
Trim13Q9CYB0 Gm19855-201ENSMUST00000210145 249 ntBASIC2.24□□□□□ -2.05
Trim13Q9CYB0 Gm25357-201ENSMUST00000082745 72 ntBASIC2.24□□□□□ -2.05
Trim13Q9CYB0 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trim13Q9CYB0 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Trim13Q9CYB0 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.23□□□□□ -2.05
Trim13Q9CYB0 Gm24049-201ENSMUST00000102409 100 ntBASIC2.23□□□□□ -2.05
Trim13Q9CYB0 Gm12941-201ENSMUST00000117934 220 ntBASIC2.23□□□□□ -2.05
Trim13Q9CYB0 Gm14588-201ENSMUST00000119895 172 ntBASIC2.23□□□□□ -2.05
Trim13Q9CYB0 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.23□□□□□ -2.05
Trim13Q9CYB0 Gm23390-201ENSMUST00000157393 106 ntBASIC2.23□□□□□ -2.05
Trim13Q9CYB0 Gm24212-201ENSMUST00000158258 132 ntBASIC2.23□□□□□ -2.05
Trim13Q9CYB0 Gm25618-201ENSMUST00000179484 107 ntBASIC2.23□□□□□ -2.05
Trim13Q9CYB0 Gm27532-201ENSMUST00000183726 113 ntBASIC2.23□□□□□ -2.05
Trim13Q9CYB0 Gm25899-201ENSMUST00000082672 141 ntBASIC2.23□□□□□ -2.05
Trim13Q9CYB0 Gm22154-201ENSMUST00000083844 131 ntBASIC2.23□□□□□ -2.05
Trim13Q9CYB0 Mir451a-201ENSMUST00000093557 72 ntBASIC2.23□□□□□ -2.05
Trim13Q9CYB0 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Trim13Q9CYB0 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
Trim13Q9CYB0 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trim13Q9CYB0 Gm25376-201ENSMUST00000104340 133 ntBASIC2.22□□□□□ -2.05
Trim13Q9CYB0 Mir880-201ENSMUST00000104809 78 ntBASIC2.22□□□□□ -2.05
Trim13Q9CYB0 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.22□□□□□ -2.05
Trim13Q9CYB0 Gm24384-201ENSMUST00000122693 75 ntBASIC2.22□□□□□ -2.05
Trim13Q9CYB0 Gm26398-201ENSMUST00000179015 127 ntBASIC2.22□□□□□ -2.05
Trim13Q9CYB0 Gm3852-201ENSMUST00000182781 264 ntBASIC2.22□□□□□ -2.05
Trim13Q9CYB0 Mir3069-201ENSMUST00000198802 65 ntBASIC2.22□□□□□ -2.05
Trim13Q9CYB0 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trim13Q9CYB0 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trim13Q9CYB0 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.21□□□□□ -2.05
Trim13Q9CYB0 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2.21□□□□□ -2.06
Trim13Q9CYB0 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.21□□□□□ -2.06
Trim13Q9CYB0 Mir764-201ENSMUST00000103259 108 ntBASIC2.21□□□□□ -2.06
Trim13Q9CYB0 Gm24691-201ENSMUST00000157762 140 ntBASIC2.21□□□□□ -2.06
Trim13Q9CYB0 Gm25996-201ENSMUST00000175393 117 ntBASIC2.21□□□□□ -2.06
Trim13Q9CYB0 Gm24656-201ENSMUST00000177548 132 ntBASIC2.21□□□□□ -2.06
Trim13Q9CYB0 Gm23726-201ENSMUST00000178937 67 ntBASIC2.21□□□□□ -2.06
Trim13Q9CYB0 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Trim13Q9CYB0 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.21□□□□□ -2.06
Trim13Q9CYB0 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Trim13Q9CYB0 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 164.1 ms