Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Mir201-201ENSMUST00000083470 66 ntBASIC0.96□□□□□ -2.26
Ddx28Q9CWT6 Gm22482-201ENSMUST00000122563 359 ntBASIC0.95□□□□□ -2.26
Ddx28Q9CWT6 Gm23760-201ENSMUST00000158350 116 ntBASIC0.95□□□□□ -2.26
Ddx28Q9CWT6 Mir3968-201ENSMUST00000175355 100 ntBASIC0.95□□□□□ -2.26
Ddx28Q9CWT6 Mir7039-201ENSMUST00000183852 85 ntBASIC0.95□□□□□ -2.26
Ddx28Q9CWT6 Gm44948-201ENSMUST00000209050 149 ntBASIC0.95□□□□□ -2.26
Ddx28Q9CWT6 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.95□□□□□ -2.26
Ddx28Q9CWT6 Gm26123-201ENSMUST00000083363 135 ntBASIC0.95□□□□□ -2.26
Ddx28Q9CWT6 Mir488-201ENSMUST00000093595 109 ntBASIC0.95□□□□□ -2.26
Ddx28Q9CWT6 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.95□□□□□ -2.26
Ddx28Q9CWT6 Gm24431-201ENSMUST00000104073 66 ntBASIC0.94□□□□□ -2.26
Ddx28Q9CWT6 Gm23772-201ENSMUST00000104433 102 ntBASIC0.94□□□□□ -2.26
Ddx28Q9CWT6 Mir467g-201ENSMUST00000116906 120 ntBASIC0.94□□□□□ -2.26
Ddx28Q9CWT6 Gm44922-201ENSMUST00000206690 90 ntBASIC0.94□□□□□ -2.26
Ddx28Q9CWT6 Gm24311-201ENSMUST00000082570 104 ntBASIC0.94□□□□□ -2.26
Ddx28Q9CWT6 Mir22-201ENSMUST00000083595 95 ntBASIC0.94□□□□□ -2.26
Ddx28Q9CWT6 Mir324-201ENSMUST00000083600 89 ntBASIC0.94□□□□□ -2.26
Ddx28Q9CWT6 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.94□□□□□ -2.26
Ddx28Q9CWT6 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Ddx28Q9CWT6 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Ddx28Q9CWT6 Mir547-201ENSMUST00000102051 78 ntBASIC0.93□□□□□ -2.26
Ddx28Q9CWT6 Gm27934-201ENSMUST00000158795 63 ntBASIC0.93□□□□□ -2.26
Ddx28Q9CWT6 Mir7052-201ENSMUST00000184821 65 ntBASIC0.93□□□□□ -2.26
Ddx28Q9CWT6 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Ddx28Q9CWT6 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.93□□□□□ -2.26
Ddx28Q9CWT6 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.93□□□□□ -2.26
Ddx28Q9CWT6 Gm8508-201ENSMUST00000061226 363 ntBASIC0.93□□□□□ -2.26
Ddx28Q9CWT6 Gm24624-201ENSMUST00000082617 164 ntBASIC0.93□□□□□ -2.26
Ddx28Q9CWT6 Snord47-201ENSMUST00000083034 77 ntBASIC0.93□□□□□ -2.26
Ddx28Q9CWT6 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.93□□□□□ -2.26
Ddx28Q9CWT6 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.93□□□□□ -2.26
Ddx28Q9CWT6 Gm25611-201ENSMUST00000104017 133 ntBASIC0.92□□□□□ -2.26
Ddx28Q9CWT6 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Ddx28Q9CWT6 Gm22946-201ENSMUST00000158558 82 ntBASIC0.92□□□□□ -2.26
Ddx28Q9CWT6 Gm23209-201ENSMUST00000158667 110 ntBASIC0.92□□□□□ -2.26
Ddx28Q9CWT6 Gm42533-201ENSMUST00000196247 157 ntBASIC0.92□□□□□ -2.26
Ddx28Q9CWT6 Gm22169-201ENSMUST00000083229 107 ntBASIC0.92□□□□□ -2.26
Ddx28Q9CWT6 Gm25410-201ENSMUST00000083758 137 ntBASIC0.92□□□□□ -2.26
Ddx28Q9CWT6 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Gm24250-201ENSMUST00000157320 135 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Gm16546-201ENSMUST00000159442 355 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Gm23770-201ENSMUST00000178009 108 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Gm22832-201ENSMUST00000178022 108 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Gm23863-201ENSMUST00000178265 108 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Gm24828-201ENSMUST00000178507 108 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Gm22887-201ENSMUST00000178586 107 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Gm23052-201ENSMUST00000178633 108 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Gm25729-201ENSMUST00000179050 108 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Gm25359-201ENSMUST00000179315 108 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Gm22624-201ENSMUST00000179913 108 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Gm24020-201ENSMUST00000180156 108 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Mir6380-201ENSMUST00000184334 81 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Gm42623-201ENSMUST00000197225 379 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Gm43381-201ENSMUST00000198553 165 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Gm26225-201ENSMUST00000082508 135 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.91□□□□□ -2.26
Ddx28Q9CWT6 Mir1298-201ENSMUST00000116681 98 ntBASIC0.9□□□□□ -2.27
Ddx28Q9CWT6 Gm24942-201ENSMUST00000158328 114 ntBASIC0.9□□□□□ -2.27
Ddx28Q9CWT6 Gm26403-201ENSMUST00000158500 105 ntBASIC0.9□□□□□ -2.27
Ddx28Q9CWT6 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Ddx28Q9CWT6 Gm22576-201ENSMUST00000083733 104 ntBASIC0.9□□□□□ -2.27
Ddx28Q9CWT6 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
Ddx28Q9CWT6 Mir709-201ENSMUST00000102190 88 ntBASIC0.89□□□□□ -2.27
Ddx28Q9CWT6 Gm22337-201ENSMUST00000157721 132 ntBASIC0.89□□□□□ -2.27
Ddx28Q9CWT6 Gm24401-201ENSMUST00000157868 91 ntBASIC0.89□□□□□ -2.27
Ddx28Q9CWT6 Gm38274-201ENSMUST00000195689 148 ntBASIC0.89□□□□□ -2.27
Ddx28Q9CWT6 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.89□□□□□ -2.27
Ddx28Q9CWT6 Gm24616-201ENSMUST00000083274 139 ntBASIC0.89□□□□□ -2.27
Ddx28Q9CWT6 Gm12432-201ENSMUST00000119540 186 ntBASIC0.88□□□□□ -2.27
Ddx28Q9CWT6 Gm22815-201ENSMUST00000157451 62 ntBASIC0.88□□□□□ -2.27
Ddx28Q9CWT6 Gm25166-201ENSMUST00000158909 111 ntBASIC0.88□□□□□ -2.27
Ddx28Q9CWT6 Gm16307-201ENSMUST00000161269 210 ntBASIC0.88□□□□□ -2.27
Ddx28Q9CWT6 Gm26097-201ENSMUST00000179642 93 ntBASIC0.88□□□□□ -2.27
Ddx28Q9CWT6 Mir6905-201ENSMUST00000184228 70 ntBASIC0.88□□□□□ -2.27
Ddx28Q9CWT6 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.88□□□□□ -2.27
Ddx28Q9CWT6 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.88□□□□□ -2.27
Ddx28Q9CWT6 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.88□□□□□ -2.27
Ddx28Q9CWT6 Mir196b-201ENSMUST00000083509 85 ntBASIC0.88□□□□□ -2.27
Ddx28Q9CWT6 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Ddx28Q9CWT6 Gm22967-201ENSMUST00000157956 239 ntBASIC0.87□□□□□ -2.27
Ddx28Q9CWT6 Gm26358-201ENSMUST00000158215 97 ntBASIC0.87□□□□□ -2.27
Ddx28Q9CWT6 Gm27974-201ENSMUST00000183415 105 ntBASIC0.87□□□□□ -2.27
Ddx28Q9CWT6 Mir6377-201ENSMUST00000183760 114 ntBASIC0.87□□□□□ -2.27
Ddx28Q9CWT6 Mir21b-201ENSMUST00000184317 108 ntBASIC0.87□□□□□ -2.27
Ddx28Q9CWT6 Gm44462-201ENSMUST00000199696 129 ntBASIC0.87□□□□□ -2.27
Ddx28Q9CWT6 Gm5002-201ENSMUST00000207145 223 ntBASIC0.87□□□□□ -2.27
Ddx28Q9CWT6 Gm8219-201ENSMUST00000218309 242 ntBASIC0.87□□□□□ -2.27
Ddx28Q9CWT6 Mir411-201ENSMUST00000083543 82 ntBASIC0.87□□□□□ -2.27
Ddx28Q9CWT6 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.87□□□□□ -2.27
Ddx28Q9CWT6 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Ddx28Q9CWT6 Gm24232-201ENSMUST00000104314 132 ntBASIC0.86□□□□□ -2.27
Ddx28Q9CWT6 Gm24509-201ENSMUST00000157086 101 ntBASIC0.86□□□□□ -2.27
Ddx28Q9CWT6 Gm25968-201ENSMUST00000157167 100 ntBASIC0.86□□□□□ -2.27
Ddx28Q9CWT6 Gm25358-201ENSMUST00000157189 101 ntBASIC0.86□□□□□ -2.27
Ddx28Q9CWT6 Gm24750-201ENSMUST00000157843 104 ntBASIC0.86□□□□□ -2.27
Ddx28Q9CWT6 Gm24131-201ENSMUST00000158539 107 ntBASIC0.86□□□□□ -2.27
Ddx28Q9CWT6 Gm22348-201ENSMUST00000178674 79 ntBASIC0.86□□□□□ -2.27
Ddx28Q9CWT6 Mir6928-201ENSMUST00000185166 70 ntBASIC0.86□□□□□ -2.27
Ddx28Q9CWT6 Gm38323-201ENSMUST00000192450 210 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 202 ms