Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm25935-201ENSMUST00000178746 107 ntBASIC0.06□□□□□ -2.4
RTRAFQ9CQE8 Gm27656-201ENSMUST00000185055 80 ntBASIC0.06□□□□□ -2.4
RTRAFQ9CQE8 Gm38019-201ENSMUST00000195133 380 ntBASIC0.06□□□□□ -2.4
RTRAFQ9CQE8 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.06□□□□□ -2.4
RTRAFQ9CQE8 Gm25135-201ENSMUST00000082648 143 ntBASIC0.06□□□□□ -2.4
RTRAFQ9CQE8 Mir200a-201ENSMUST00000083466 90 ntBASIC0.06□□□□□ -2.4
RTRAFQ9CQE8 Mir669d-2-201ENSMUST00000116854 86 ntBASIC0.05□□□□□ -2.4
RTRAFQ9CQE8 Gm16186-201ENSMUST00000120132 216 ntBASIC0.05□□□□□ -2.4
RTRAFQ9CQE8 Mir1899-201ENSMUST00000122798 96 ntBASIC0.05□□□□□ -2.4
RTRAFQ9CQE8 Gm22999-201ENSMUST00000157082 88 ntBASIC0.05□□□□□ -2.4
RTRAFQ9CQE8 Gm26160-201ENSMUST00000158965 63 ntBASIC0.05□□□□□ -2.4
RTRAFQ9CQE8 Gm45859-201ENSMUST00000212794 214 ntBASIC0.05□□□□□ -2.4
RTRAFQ9CQE8 Gm25588-201ENSMUST00000082501 140 ntBASIC0.05□□□□□ -2.4
RTRAFQ9CQE8 Mir384-201ENSMUST00000083565 88 ntBASIC0.05□□□□□ -2.4
RTRAFQ9CQE8 Gm10172-201ENSMUST00000085929 558 ntBASIC0.05□□□□□ -2.4
RTRAFQ9CQE8 Mir710-201ENSMUST00000102088 110 ntBASIC0.04□□□□□ -2.4
RTRAFQ9CQE8 Snord100-201ENSMUST00000116836 74 ntBASIC0.04□□□□□ -2.4
RTRAFQ9CQE8 Gm24250-201ENSMUST00000157320 135 ntBASIC0.04□□□□□ -2.4
RTRAFQ9CQE8 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.04□□□□□ -2.4
RTRAFQ9CQE8 Gm24575-201ENSMUST00000175502 77 ntBASIC0.04□□□□□ -2.4
RTRAFQ9CQE8 Gm23770-201ENSMUST00000178009 108 ntBASIC0.04□□□□□ -2.4
RTRAFQ9CQE8 Gm22832-201ENSMUST00000178022 108 ntBASIC0.04□□□□□ -2.4
RTRAFQ9CQE8 Gm23863-201ENSMUST00000178265 108 ntBASIC0.04□□□□□ -2.4
RTRAFQ9CQE8 Gm24828-201ENSMUST00000178507 108 ntBASIC0.04□□□□□ -2.4
RTRAFQ9CQE8 Gm23052-201ENSMUST00000178633 108 ntBASIC0.04□□□□□ -2.4
RTRAFQ9CQE8 Gm25729-201ENSMUST00000179050 108 ntBASIC0.04□□□□□ -2.4
RTRAFQ9CQE8 Gm25359-201ENSMUST00000179315 108 ntBASIC0.04□□□□□ -2.4
RTRAFQ9CQE8 Gm22624-201ENSMUST00000179913 108 ntBASIC0.04□□□□□ -2.4
RTRAFQ9CQE8 Mir6342-201ENSMUST00000183870 125 ntBASIC0.04□□□□□ -2.4
RTRAFQ9CQE8 Gm28767-201ENSMUST00000188601 114 ntBASIC0.04□□□□□ -2.4
RTRAFQ9CQE8 Mir721-201ENSMUST00000200230 88 ntBASIC0.04□□□□□ -2.4
RTRAFQ9CQE8 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
RTRAFQ9CQE8 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.03□□□□□ -2.4
RTRAFQ9CQE8 Mir881-201ENSMUST00000104844 78 ntBASIC0.03□□□□□ -2.4
RTRAFQ9CQE8 Gm22815-201ENSMUST00000157451 62 ntBASIC0.03□□□□□ -2.4
RTRAFQ9CQE8 Gm23714-201ENSMUST00000179259 105 ntBASIC0.03□□□□□ -2.4
RTRAFQ9CQE8 Gm28001-201ENSMUST00000183561 117 ntBASIC0.03□□□□□ -2.4
RTRAFQ9CQE8 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.03□□□□□ -2.4
RTRAFQ9CQE8 Gm3702-201ENSMUST00000211754 346 ntBASIC0.03□□□□□ -2.4
RTRAFQ9CQE8 Mir377-201ENSMUST00000083504 68 ntBASIC0.03□□□□□ -2.4
RTRAFQ9CQE8 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
RTRAFQ9CQE8 Gm26420-201ENSMUST00000104273 103 ntBASIC0.02□□□□□ -2.41
RTRAFQ9CQE8 Gm23881-201ENSMUST00000116872 66 ntBASIC0.02□□□□□ -2.41
RTRAFQ9CQE8 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.02□□□□□ -2.41
RTRAFQ9CQE8 Gm23917-201ENSMUST00000175256 98 ntBASIC0.02□□□□□ -2.41
RTRAFQ9CQE8 Gm23567-201ENSMUST00000178005 107 ntBASIC0.02□□□□□ -2.41
RTRAFQ9CQE8 Gm27993-201ENSMUST00000184362 85 ntBASIC0.02□□□□□ -2.41
RTRAFQ9CQE8 Gm38364-201ENSMUST00000191814 179 ntBASIC0.02□□□□□ -2.41
RTRAFQ9CQE8 AC109214.2-201ENSMUST00000220089 358 ntBASIC0.02□□□□□ -2.41
RTRAFQ9CQE8 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.02□□□□□ -2.41
RTRAFQ9CQE8 Gm23301-201ENSMUST00000082713 65 ntBASIC0.02□□□□□ -2.41
RTRAFQ9CQE8 Gm22358-201ENSMUST00000082877 122 ntBASIC0.02□□□□□ -2.41
RTRAFQ9CQE8 Gm25188-201ENSMUST00000083913 122 ntBASIC0.02□□□□□ -2.41
RTRAFQ9CQE8 Gm12815-201ENSMUST00000121737 135 ntBASIC0.01□□□□□ -2.41
RTRAFQ9CQE8 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.01□□□□□ -2.41
RTRAFQ9CQE8 Gm28020-201ENSMUST00000157739 67 ntBASIC0.01□□□□□ -2.41
RTRAFQ9CQE8 Mir3105-201ENSMUST00000175480 85 ntBASIC0.01□□□□□ -2.41
RTRAFQ9CQE8 Mir7039-201ENSMUST00000183852 85 ntBASIC0.01□□□□□ -2.41
RTRAFQ9CQE8 Gm37330-201ENSMUST00000192606 153 ntBASIC0.01□□□□□ -2.41
RTRAFQ9CQE8 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
RTRAFQ9CQE8 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
RTRAFQ9CQE8 Mir411-201ENSMUST00000083543 82 ntBASIC0.01□□□□□ -2.41
RTRAFQ9CQE8 Gm24278-201ENSMUST00000104239 127 ntBASIC0□□□□□ -2.41
RTRAFQ9CQE8 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0□□□□□ -2.41
RTRAFQ9CQE8 Mir669i-201ENSMUST00000117007 127 ntBASIC0□□□□□ -2.41
RTRAFQ9CQE8 Gm24594-201ENSMUST00000122502 99 ntBASIC0□□□□□ -2.41
RTRAFQ9CQE8 Gm22332-201ENSMUST00000158072 126 ntBASIC0□□□□□ -2.41
RTRAFQ9CQE8 Gm25267-201ENSMUST00000158522 63 ntBASIC0□□□□□ -2.41
RTRAFQ9CQE8 Gm26158-201ENSMUST00000158973 119 ntBASIC0□□□□□ -2.41
RTRAFQ9CQE8 Gm24321-201ENSMUST00000175348 80 ntBASIC0□□□□□ -2.41
RTRAFQ9CQE8 Gm8508-201ENSMUST00000061226 363 ntBASIC0□□□□□ -2.41
RTRAFQ9CQE8 Mir670-201ENSMUST00000102380 100 ntBASIC-0.01□□□□□ -2.41
RTRAFQ9CQE8 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.01□□□□□ -2.41
RTRAFQ9CQE8 Gm23340-201ENSMUST00000158955 123 ntBASIC-0.01□□□□□ -2.41
RTRAFQ9CQE8 Gm16546-201ENSMUST00000159442 355 ntBASIC-0.01□□□□□ -2.41
RTRAFQ9CQE8 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.01□□□□□ -2.41
RTRAFQ9CQE8 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.01□□□□□ -2.41
RTRAFQ9CQE8 AL603630.1-201ENSMUST00000214781 147 ntBASIC-0.01□□□□□ -2.41
RTRAFQ9CQE8 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
RTRAFQ9CQE8 Snord60-201ENSMUST00000082834 78 ntBASIC-0.01□□□□□ -2.41
RTRAFQ9CQE8 Gm25895-201ENSMUST00000083714 100 ntBASIC-0.01□□□□□ -2.41
RTRAFQ9CQE8 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
RTRAFQ9CQE8 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.02□□□□□ -2.41
RTRAFQ9CQE8 Snord71-201ENSMUST00000104361 85 ntBASIC-0.02□□□□□ -2.41
RTRAFQ9CQE8 Gm13339-201ENSMUST00000120651 510 ntBASIC-0.02□□□□□ -2.41
RTRAFQ9CQE8 Gm13577-201ENSMUST00000121365 205 ntBASIC-0.02□□□□□ -2.41
RTRAFQ9CQE8 n-R5s87-201ENSMUST00000122752 116 ntBASIC-0.02□□□□□ -2.41
RTRAFQ9CQE8 Gm23761-201ENSMUST00000158347 104 ntBASIC-0.02□□□□□ -2.41
RTRAFQ9CQE8 Mir6928-201ENSMUST00000185166 70 ntBASIC-0.02□□□□□ -2.41
RTRAFQ9CQE8 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.02□□□□□ -2.41
RTRAFQ9CQE8 AC211878.4-201ENSMUST00000220970 262 ntBASIC-0.02□□□□□ -2.41
RTRAFQ9CQE8 CT030645.1-201ENSMUST00000224020 231 ntBASIC-0.02□□□□□ -2.41
RTRAFQ9CQE8 Gm14883-201ENSMUST00000120179 157 ntBASIC-0.03□□□□□ -2.41
RTRAFQ9CQE8 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.03□□□□□ -2.41
RTRAFQ9CQE8 Gm24724-201ENSMUST00000158230 107 ntBASIC-0.03□□□□□ -2.41
RTRAFQ9CQE8 Gm25015-201ENSMUST00000158400 128 ntBASIC-0.03□□□□□ -2.41
RTRAFQ9CQE8 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.03□□□□□ -2.41
RTRAFQ9CQE8 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC-0.03□□□□□ -2.41
RTRAFQ9CQE8 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.03□□□□□ -2.41
RTRAFQ9CQE8 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 195.4 ms