Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm26479-201ENSMUST00000122620 106 ntBASIC-0.49□□□□□ -2.49
Rpa3Q9CQ71 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.49□□□□□ -2.49
Rpa3Q9CQ71 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-0.49□□□□□ -2.49
Rpa3Q9CQ71 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.5□□□□□ -2.49
Rpa3Q9CQ71 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.5□□□□□ -2.49
Rpa3Q9CQ71 Gm24501-201ENSMUST00000158452 62 ntBASIC-0.5□□□□□ -2.49
Rpa3Q9CQ71 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.5□□□□□ -2.49
Rpa3Q9CQ71 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.5□□□□□ -2.49
Rpa3Q9CQ71 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.5□□□□□ -2.49
Rpa3Q9CQ71 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.51□□□□□ -2.49
Rpa3Q9CQ71 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.51□□□□□ -2.49
Rpa3Q9CQ71 Gm22048-201ENSMUST00000104721 89 ntBASIC-0.51□□□□□ -2.49
Rpa3Q9CQ71 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.51□□□□□ -2.49
Rpa3Q9CQ71 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.51□□□□□ -2.49
Rpa3Q9CQ71 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.51□□□□□ -2.49
Rpa3Q9CQ71 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.51□□□□□ -2.49
Rpa3Q9CQ71 Gm27607-201ENSMUST00000185162 122 ntBASIC-0.51□□□□□ -2.49
Rpa3Q9CQ71 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.51□□□□□ -2.49
Rpa3Q9CQ71 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.51□□□□□ -2.49
Rpa3Q9CQ71 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.52□□□□□ -2.49
Rpa3Q9CQ71 Gm23655-201ENSMUST00000122627 105 ntBASIC-0.52□□□□□ -2.49
Rpa3Q9CQ71 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-0.52□□□□□ -2.49
Rpa3Q9CQ71 Gm25771-201ENSMUST00000158565 144 ntBASIC-0.52□□□□□ -2.49
Rpa3Q9CQ71 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.52□□□□□ -2.49
Rpa3Q9CQ71 Gm24445-201ENSMUST00000083981 107 ntBASIC-0.52□□□□□ -2.49
Rpa3Q9CQ71 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
Rpa3Q9CQ71 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.53□□□□□ -2.49
Rpa3Q9CQ71 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.53□□□□□ -2.49
Rpa3Q9CQ71 Ighv12-2-201ENSMUST00000191949 362 ntBASIC-0.53□□□□□ -2.49
Rpa3Q9CQ71 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.53□□□□□ -2.49
Rpa3Q9CQ71 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.53□□□□□ -2.49
Rpa3Q9CQ71 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-0.54□□□□□ -2.5
Rpa3Q9CQ71 Gm27723-201ENSMUST00000157398 63 ntBASIC-0.54□□□□□ -2.5
Rpa3Q9CQ71 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.54□□□□□ -2.5
Rpa3Q9CQ71 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
Rpa3Q9CQ71 Gm42622-201ENSMUST00000197229 355 ntBASIC-0.54□□□□□ -2.5
Rpa3Q9CQ71 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-0.54□□□□□ -2.5
Rpa3Q9CQ71 Gm22686-201ENSMUST00000082847 100 ntBASIC-0.54□□□□□ -2.5
Rpa3Q9CQ71 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
Rpa3Q9CQ71 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.55□□□□□ -2.5
Rpa3Q9CQ71 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.55□□□□□ -2.5
Rpa3Q9CQ71 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.55□□□□□ -2.5
Rpa3Q9CQ71 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.55□□□□□ -2.5
Rpa3Q9CQ71 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.55□□□□□ -2.5
Rpa3Q9CQ71 Mir7093-201ENSMUST00000184195 101 ntBASIC-0.55□□□□□ -2.5
Rpa3Q9CQ71 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC-0.55□□□□□ -2.5
Rpa3Q9CQ71 Gm29665-201ENSMUST00000191457 528 ntBASIC-0.55□□□□□ -2.5
Rpa3Q9CQ71 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.55□□□□□ -2.5
Rpa3Q9CQ71 Gm43976-201ENSMUST00000203637 235 ntBASIC-0.55□□□□□ -2.5
Rpa3Q9CQ71 Gm44687-201ENSMUST00000204975 235 ntBASIC-0.55□□□□□ -2.5
Rpa3Q9CQ71 n-R5s96-201ENSMUST00000082574 124 ntBASIC-0.55□□□□□ -2.5
Rpa3Q9CQ71 Gm24316-201ENSMUST00000083041 107 ntBASIC-0.55□□□□□ -2.5
Rpa3Q9CQ71 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
Rpa3Q9CQ71 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.56□□□□□ -2.5
Rpa3Q9CQ71 Gm25875-201ENSMUST00000104323 107 ntBASIC-0.56□□□□□ -2.5
Rpa3Q9CQ71 Gm23708-201ENSMUST00000104367 123 ntBASIC-0.56□□□□□ -2.5
Rpa3Q9CQ71 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-0.56□□□□□ -2.5
Rpa3Q9CQ71 Gm13345-201ENSMUST00000121928 228 ntBASIC-0.56□□□□□ -2.5
Rpa3Q9CQ71 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.56□□□□□ -2.5
Rpa3Q9CQ71 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.56□□□□□ -2.5
Rpa3Q9CQ71 Gm22450-201ENSMUST00000179641 107 ntBASIC-0.56□□□□□ -2.5
Rpa3Q9CQ71 Gm25473-201ENSMUST00000180191 107 ntBASIC-0.56□□□□□ -2.5
Rpa3Q9CQ71 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.56□□□□□ -2.5
Rpa3Q9CQ71 Gm44563-201ENSMUST00000207958 178 ntBASIC-0.56□□□□□ -2.5
Rpa3Q9CQ71 Gm24856-201ENSMUST00000082809 107 ntBASIC-0.56□□□□□ -2.5
Rpa3Q9CQ71 Gm25793-201ENSMUST00000083287 107 ntBASIC-0.56□□□□□ -2.5
Rpa3Q9CQ71 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.56□□□□□ -2.5
Rpa3Q9CQ71 Gm24521-201ENSMUST00000083958 107 ntBASIC-0.56□□□□□ -2.5
Rpa3Q9CQ71 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-0.57□□□□□ -2.5
Rpa3Q9CQ71 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.57□□□□□ -2.5
Rpa3Q9CQ71 Gm25848-201ENSMUST00000116790 144 ntBASIC-0.57□□□□□ -2.5
Rpa3Q9CQ71 Gm12797-201ENSMUST00000118645 273 ntBASIC-0.57□□□□□ -2.5
Rpa3Q9CQ71 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.57□□□□□ -2.5
Rpa3Q9CQ71 Gm26402-201ENSMUST00000158499 113 ntBASIC-0.57□□□□□ -2.5
Rpa3Q9CQ71 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.57□□□□□ -2.5
Rpa3Q9CQ71 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
Rpa3Q9CQ71 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.57□□□□□ -2.5
Rpa3Q9CQ71 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.58□□□□□ -2.5
Rpa3Q9CQ71 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.58□□□□□ -2.5
Rpa3Q9CQ71 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.58□□□□□ -2.5
Rpa3Q9CQ71 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.58□□□□□ -2.5
Rpa3Q9CQ71 Gm27672-201ENSMUST00000183751 204 ntBASIC-0.58□□□□□ -2.5
Rpa3Q9CQ71 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.58□□□□□ -2.5
Rpa3Q9CQ71 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
Rpa3Q9CQ71 Gm25634-201ENSMUST00000082667 105 ntBASIC-0.58□□□□□ -2.5
Rpa3Q9CQ71 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.59□□□□□ -2.5
Rpa3Q9CQ71 Gm22051-201ENSMUST00000117002 127 ntBASIC-0.59□□□□□ -2.5
Rpa3Q9CQ71 Gm14301-201ENSMUST00000120181 324 ntBASIC-0.59□□□□□ -2.5
Rpa3Q9CQ71 Gm13797-201ENSMUST00000121792 120 ntBASIC-0.59□□□□□ -2.5
Rpa3Q9CQ71 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.59□□□□□ -2.5
Rpa3Q9CQ71 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.59□□□□□ -2.5
Rpa3Q9CQ71 AC167192.1-201ENSMUST00000225908 139 ntBASIC-0.59□□□□□ -2.5
Rpa3Q9CQ71 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.59□□□□□ -2.5
Rpa3Q9CQ71 n-R5s94-201ENSMUST00000082573 119 ntBASIC-0.59□□□□□ -2.5
Rpa3Q9CQ71 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.6□□□□□ -2.51
Rpa3Q9CQ71 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.6□□□□□ -2.51
Rpa3Q9CQ71 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.6□□□□□ -2.51
Rpa3Q9CQ71 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.6□□□□□ -2.51
Rpa3Q9CQ71 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.6□□□□□ -2.51
Rpa3Q9CQ71 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 144.9 ms