Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.41□□□□□ -2.34
Sf3b1Q99NB9 Gm14884-201ENSMUST00000120456 196 ntBASIC0.41□□□□□ -2.34
Sf3b1Q99NB9 Gm24594-201ENSMUST00000122502 99 ntBASIC0.41□□□□□ -2.34
Sf3b1Q99NB9 Gm25362-201ENSMUST00000158854 105 ntBASIC0.41□□□□□ -2.34
Sf3b1Q99NB9 Gm6003-201ENSMUST00000187903 463 ntBASIC0.41□□□□□ -2.34
Sf3b1Q99NB9 AC154245.1-201ENSMUST00000224615 601 ntBASIC0.41□□□□□ -2.34
Sf3b1Q99NB9 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Sf3b1Q99NB9 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.4□□□□□ -2.34
Sf3b1Q99NB9 Gm24963-201ENSMUST00000157916 144 ntBASIC0.4□□□□□ -2.34
Sf3b1Q99NB9 Gm23763-201ENSMUST00000158345 60 ntBASIC0.4□□□□□ -2.34
Sf3b1Q99NB9 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.4□□□□□ -2.34
Sf3b1Q99NB9 Gm22887-201ENSMUST00000178586 107 ntBASIC0.4□□□□□ -2.34
Sf3b1Q99NB9 Mir6377-201ENSMUST00000183760 114 ntBASIC0.4□□□□□ -2.34
Sf3b1Q99NB9 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.4□□□□□ -2.34
Sf3b1Q99NB9 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.4□□□□□ -2.34
Sf3b1Q99NB9 Gm25814-201ENSMUST00000082754 107 ntBASIC0.4□□□□□ -2.34
Sf3b1Q99NB9 Gm23378-201ENSMUST00000082942 107 ntBASIC0.4□□□□□ -2.34
Sf3b1Q99NB9 Gm22287-201ENSMUST00000083197 107 ntBASIC0.4□□□□□ -2.34
Sf3b1Q99NB9 Mir384-201ENSMUST00000083565 88 ntBASIC0.4□□□□□ -2.34
Sf3b1Q99NB9 Gm24762-201ENSMUST00000083689 104 ntBASIC0.4□□□□□ -2.34
Sf3b1Q99NB9 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.4□□□□□ -2.35
Sf3b1Q99NB9 Gm23841-201ENSMUST00000116951 114 ntBASIC0.39□□□□□ -2.35
Sf3b1Q99NB9 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.39□□□□□ -2.35
Sf3b1Q99NB9 Gm24772-201ENSMUST00000158507 110 ntBASIC0.39□□□□□ -2.35
Sf3b1Q99NB9 Gm22433-201ENSMUST00000158550 142 ntBASIC0.39□□□□□ -2.35
Sf3b1Q99NB9 Gm24225-201ENSMUST00000158825 98 ntBASIC0.39□□□□□ -2.35
Sf3b1Q99NB9 Gm25464-201ENSMUST00000175481 107 ntBASIC0.39□□□□□ -2.35
Sf3b1Q99NB9 Gm37889-201ENSMUST00000194174 251 ntBASIC0.39□□□□□ -2.35
Sf3b1Q99NB9 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.39□□□□□ -2.35
Sf3b1Q99NB9 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.39□□□□□ -2.35
Sf3b1Q99NB9 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Sf3b1Q99NB9 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Sf3b1Q99NB9 Gm12815-201ENSMUST00000121737 135 ntBASIC0.38□□□□□ -2.35
Sf3b1Q99NB9 Gm25161-201ENSMUST00000158913 132 ntBASIC0.38□□□□□ -2.35
Sf3b1Q99NB9 Snora15-201ENSMUST00000177461 131 ntBASIC0.38□□□□□ -2.35
Sf3b1Q99NB9 Gm43944-201ENSMUST00000205220 120 ntBASIC0.38□□□□□ -2.35
Sf3b1Q99NB9 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.38□□□□□ -2.35
Sf3b1Q99NB9 Mir541-201ENSMUST00000102097 90 ntBASIC0.38□□□□□ -2.35
Sf3b1Q99NB9 Mir1197-201ENSMUST00000117037 120 ntBASIC0.38□□□□□ -2.35
Sf3b1Q99NB9 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.38□□□□□ -2.35
Sf3b1Q99NB9 Gm25393-201ENSMUST00000157336 285 ntBASIC0.38□□□□□ -2.35
Sf3b1Q99NB9 Gm24549-201ENSMUST00000158647 139 ntBASIC0.38□□□□□ -2.35
Sf3b1Q99NB9 Gm22466-201ENSMUST00000175278 69 ntBASIC0.38□□□□□ -2.35
Sf3b1Q99NB9 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.38□□□□□ -2.35
Sf3b1Q99NB9 Gm26326-201ENSMUST00000083070 129 ntBASIC0.38□□□□□ -2.35
Sf3b1Q99NB9 Gm24929-201ENSMUST00000083403 139 ntBASIC0.38□□□□□ -2.35
Sf3b1Q99NB9 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Sf3b1Q99NB9 Snord69-201ENSMUST00000104024 80 ntBASIC0.37□□□□□ -2.35
Sf3b1Q99NB9 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
Sf3b1Q99NB9 Gm15289-201ENSMUST00000117793 244 ntBASIC0.37□□□□□ -2.35
Sf3b1Q99NB9 Gm22999-201ENSMUST00000157082 88 ntBASIC0.37□□□□□ -2.35
Sf3b1Q99NB9 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.37□□□□□ -2.35
Sf3b1Q99NB9 Gm25247-201ENSMUST00000175475 90 ntBASIC0.37□□□□□ -2.35
Sf3b1Q99NB9 Gm26116-201ENSMUST00000175600 77 ntBASIC0.37□□□□□ -2.35
Sf3b1Q99NB9 Gm27672-201ENSMUST00000183751 204 ntBASIC0.37□□□□□ -2.35
Sf3b1Q99NB9 Gm44989-201ENSMUST00000204749 217 ntBASIC0.37□□□□□ -2.35
Sf3b1Q99NB9 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.37□□□□□ -2.35
Sf3b1Q99NB9 Gm23969-201ENSMUST00000083324 74 ntBASIC0.37□□□□□ -2.35
Sf3b1Q99NB9 Gm26123-201ENSMUST00000083363 135 ntBASIC0.37□□□□□ -2.35
Sf3b1Q99NB9 Gm24121-201ENSMUST00000102029 106 ntBASIC0.36□□□□□ -2.35
Sf3b1Q99NB9 Gm26076-201ENSMUST00000104065 105 ntBASIC0.36□□□□□ -2.35
Sf3b1Q99NB9 Gm6897-201ENSMUST00000117714 138 ntBASIC0.36□□□□□ -2.35
Sf3b1Q99NB9 Gm11936-201ENSMUST00000118323 160 ntBASIC0.36□□□□□ -2.35
Sf3b1Q99NB9 Gm14758-201ENSMUST00000119104 138 ntBASIC0.36□□□□□ -2.35
Sf3b1Q99NB9 Gm12686-201ENSMUST00000120546 397 ntBASIC0.36□□□□□ -2.35
Sf3b1Q99NB9 Gm24509-201ENSMUST00000157086 101 ntBASIC0.36□□□□□ -2.35
Sf3b1Q99NB9 Gm25358-201ENSMUST00000157189 101 ntBASIC0.36□□□□□ -2.35
Sf3b1Q99NB9 Gm22145-201ENSMUST00000157396 148 ntBASIC0.36□□□□□ -2.35
Sf3b1Q99NB9 Gm25771-201ENSMUST00000158565 144 ntBASIC0.36□□□□□ -2.35
Sf3b1Q99NB9 Gm23047-201ENSMUST00000177661 94 ntBASIC0.36□□□□□ -2.35
Sf3b1Q99NB9 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.36□□□□□ -2.35
Sf3b1Q99NB9 Mir224-201ENSMUST00000083608 82 ntBASIC0.36□□□□□ -2.35
Sf3b1Q99NB9 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Sf3b1Q99NB9 Snord19-201ENSMUST00000104609 76 ntBASIC0.35□□□□□ -2.35
Sf3b1Q99NB9 Gm13345-201ENSMUST00000121928 228 ntBASIC0.35□□□□□ -2.35
Sf3b1Q99NB9 Gm22340-201ENSMUST00000157717 114 ntBASIC0.35□□□□□ -2.35
Sf3b1Q99NB9 Gm25494-201ENSMUST00000158143 100 ntBASIC0.35□□□□□ -2.35
Sf3b1Q99NB9 Gm25015-201ENSMUST00000158400 128 ntBASIC0.35□□□□□ -2.35
Sf3b1Q99NB9 Gm25267-201ENSMUST00000158522 63 ntBASIC0.35□□□□□ -2.35
Sf3b1Q99NB9 Gm26160-201ENSMUST00000158965 63 ntBASIC0.35□□□□□ -2.35
Sf3b1Q99NB9 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.35□□□□□ -2.35
Sf3b1Q99NB9 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.35□□□□□ -2.35
Sf3b1Q99NB9 Gm25300-201ENSMUST00000175284 84 ntBASIC0.35□□□□□ -2.35
Sf3b1Q99NB9 Gm24415-201ENSMUST00000180218 107 ntBASIC0.35□□□□□ -2.35
Sf3b1Q99NB9 Mir7077-201ENSMUST00000183991 57 ntBASIC0.35□□□□□ -2.35
Sf3b1Q99NB9 Gm19790-201ENSMUST00000214414 251 ntBASIC0.35□□□□□ -2.35
Sf3b1Q99NB9 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Sf3b1Q99NB9 Gm24867-201ENSMUST00000104161 107 ntBASIC0.34□□□□□ -2.36
Sf3b1Q99NB9 Gm14567-201ENSMUST00000117155 174 ntBASIC0.34□□□□□ -2.36
Sf3b1Q99NB9 Gm26279-201ENSMUST00000157095 102 ntBASIC0.34□□□□□ -2.36
Sf3b1Q99NB9 Gm23892-201ENSMUST00000158105 130 ntBASIC0.34□□□□□ -2.36
Sf3b1Q99NB9 Gm27476-201ENSMUST00000183366 104 ntBASIC0.34□□□□□ -2.36
Sf3b1Q99NB9 AL606472.1-201ENSMUST00000224628 275 ntBASIC0.34□□□□□ -2.36
Sf3b1Q99NB9 Gm24208-201ENSMUST00000082783 135 ntBASIC0.34□□□□□ -2.36
Sf3b1Q99NB9 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.34□□□□□ -2.36
Sf3b1Q99NB9 Mir466p-201ENSMUST00000103925 89 ntBASIC0.33□□□□□ -2.36
Sf3b1Q99NB9 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC0.33□□□□□ -2.36
Sf3b1Q99NB9 Gm22983-201ENSMUST00000158308 104 ntBASIC0.33□□□□□ -2.36
Sf3b1Q99NB9 Gm22951-201ENSMUST00000179471 107 ntBASIC0.33□□□□□ -2.36
Sf3b1Q99NB9 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 283.1 ms