Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm24913-201ENSMUST00000157286 107 ntBASIC2.39□□□□□ -2.03
Clp1Q99LI9 Gm24436-201ENSMUST00000157889 302 ntBASIC2.39□□□□□ -2.03
Clp1Q99LI9 Gm25241-201ENSMUST00000174909 84 ntBASIC2.39□□□□□ -2.03
Clp1Q99LI9 Gm26217-201ENSMUST00000175212 84 ntBASIC2.39□□□□□ -2.03
Clp1Q99LI9 Gm25949-201ENSMUST00000175333 114 ntBASIC2.39□□□□□ -2.03
Clp1Q99LI9 Mir7225-201ENSMUST00000184178 54 ntBASIC2.39□□□□□ -2.03
Clp1Q99LI9 Gm24805-201ENSMUST00000082931 104 ntBASIC2.39□□□□□ -2.03
Clp1Q99LI9 Gm26123-201ENSMUST00000083363 135 ntBASIC2.39□□□□□ -2.03
Clp1Q99LI9 Gm22055-201ENSMUST00000083388 107 ntBASIC2.39□□□□□ -2.03
Clp1Q99LI9 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Clp1Q99LI9 Gm23033-201ENSMUST00000157996 134 ntBASIC2.38□□□□□ -2.03
Clp1Q99LI9 Mir7021-201ENSMUST00000197026 63 ntBASIC2.38□□□□□ -2.03
Clp1Q99LI9 Gm44462-201ENSMUST00000199696 129 ntBASIC2.38□□□□□ -2.03
Clp1Q99LI9 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.38□□□□□ -2.03
Clp1Q99LI9 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.37□□□□□ -2.03
Clp1Q99LI9 Snora36b-201ENSMUST00000104383 132 ntBASIC2.37□□□□□ -2.03
Clp1Q99LI9 Gm25011-201ENSMUST00000158398 126 ntBASIC2.37□□□□□ -2.03
Clp1Q99LI9 Gm45429-201ENSMUST00000209527 172 ntBASIC2.37□□□□□ -2.03
Clp1Q99LI9 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.37□□□□□ -2.03
Clp1Q99LI9 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.37□□□□□ -2.03
Clp1Q99LI9 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm25610-201ENSMUST00000104016 129 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm26081-201ENSMUST00000104068 132 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm23010-201ENSMUST00000104151 126 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm24880-201ENSMUST00000158776 85 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm25444-201ENSMUST00000158999 113 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Mir5104-201ENSMUST00000175319 94 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm23375-201ENSMUST00000175407 83 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm25380-201ENSMUST00000175463 107 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm26498-201ENSMUST00000177799 79 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm24641-201ENSMUST00000178055 107 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm25484-201ENSMUST00000178217 107 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm26138-201ENSMUST00000179236 107 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm22821-201ENSMUST00000179288 107 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm26230-201ENSMUST00000180141 79 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm27517-201ENSMUST00000184347 236 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm25820-201ENSMUST00000198589 127 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm23140-201ENSMUST00000082487 107 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm23298-201ENSMUST00000083181 107 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm24614-201ENSMUST00000083269 107 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm22057-201ENSMUST00000083387 107 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Gm25516-201ENSMUST00000083857 107 ntBASIC2.36□□□□□ -2.03
Clp1Q99LI9 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Clp1Q99LI9 Gm24900-201ENSMUST00000158128 134 ntBASIC2.35□□□□□ -2.03
Clp1Q99LI9 Mir669n-201ENSMUST00000158636 54 ntBASIC2.35□□□□□ -2.03
Clp1Q99LI9 Gm44308-201ENSMUST00000197080 99 ntBASIC2.35□□□□□ -2.03
Clp1Q99LI9 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Clp1Q99LI9 Gm25636-201ENSMUST00000082666 133 ntBASIC2.34□□□□□ -2.03
Clp1Q99LI9 Snord14a-201ENSMUST00000082807 87 ntBASIC2.34□□□□□ -2.03
Clp1Q99LI9 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.34□□□□□ -2.04
Clp1Q99LI9 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
Clp1Q99LI9 Gm24098-201ENSMUST00000102075 109 ntBASIC2.33□□□□□ -2.04
Clp1Q99LI9 Gm25381-201ENSMUST00000102078 109 ntBASIC2.33□□□□□ -2.04
Clp1Q99LI9 Gm25090-201ENSMUST00000104000 132 ntBASIC2.33□□□□□ -2.04
Clp1Q99LI9 Gm16328-201ENSMUST00000126985 196 ntBASIC2.33□□□□□ -2.04
Clp1Q99LI9 Gm22490-201ENSMUST00000157188 119 ntBASIC2.33□□□□□ -2.04
Clp1Q99LI9 Gm24237-201ENSMUST00000157790 132 ntBASIC2.33□□□□□ -2.04
Clp1Q99LI9 Gm25838-201ENSMUST00000158920 120 ntBASIC2.33□□□□□ -2.04
Clp1Q99LI9 Gm16550-201ENSMUST00000162550 126 ntBASIC2.33□□□□□ -2.04
Clp1Q99LI9 Gm25678-201ENSMUST00000174984 73 ntBASIC2.33□□□□□ -2.04
Clp1Q99LI9 Gm21885-201ENSMUST00000178891 327 ntBASIC2.33□□□□□ -2.04
Clp1Q99LI9 Gm45654-201ENSMUST00000210980 123 ntBASIC2.33□□□□□ -2.04
Clp1Q99LI9 Gm23100-201ENSMUST00000083455 141 ntBASIC2.33□□□□□ -2.04
Clp1Q99LI9 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Clp1Q99LI9 Gm25611-201ENSMUST00000104017 133 ntBASIC2.32□□□□□ -2.04
Clp1Q99LI9 Gm23654-201ENSMUST00000116758 126 ntBASIC2.32□□□□□ -2.04
Clp1Q99LI9 Gm23980-201ENSMUST00000157135 158 ntBASIC2.32□□□□□ -2.04
Clp1Q99LI9 Gm25423-201ENSMUST00000157609 107 ntBASIC2.32□□□□□ -2.04
Clp1Q99LI9 Gm25044-201ENSMUST00000158603 104 ntBASIC2.32□□□□□ -2.04
Clp1Q99LI9 Gm25978-201ENSMUST00000158698 90 ntBASIC2.32□□□□□ -2.04
Clp1Q99LI9 Gm5900-201ENSMUST00000179862 375 ntBASIC2.32□□□□□ -2.04
Clp1Q99LI9 Gm43324-201ENSMUST00000197482 289 ntBASIC2.32□□□□□ -2.04
Clp1Q99LI9 Gm42795-201ENSMUST00000198847 76 ntBASIC2.32□□□□□ -2.04
Clp1Q99LI9 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.32□□□□□ -2.04
Clp1Q99LI9 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.32□□□□□ -2.04
Clp1Q99LI9 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.32□□□□□ -2.04
Clp1Q99LI9 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Clp1Q99LI9 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Clp1Q99LI9 Gm14588-201ENSMUST00000119895 172 ntBASIC2.31□□□□□ -2.04
Clp1Q99LI9 Gm23170-201ENSMUST00000157158 106 ntBASIC2.31□□□□□ -2.04
Clp1Q99LI9 Gm24475-201ENSMUST00000157435 143 ntBASIC2.31□□□□□ -2.04
Clp1Q99LI9 Gm22425-201ENSMUST00000158532 138 ntBASIC2.31□□□□□ -2.04
Clp1Q99LI9 Gm24572-201ENSMUST00000175505 88 ntBASIC2.31□□□□□ -2.04
Clp1Q99LI9 Mir6379-201ENSMUST00000183392 115 ntBASIC2.31□□□□□ -2.04
Clp1Q99LI9 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.31□□□□□ -2.04
Clp1Q99LI9 Gm23299-201ENSMUST00000082708 79 ntBASIC2.31□□□□□ -2.04
Clp1Q99LI9 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Clp1Q99LI9 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Clp1Q99LI9 Mir654-201ENSMUST00000104787 84 ntBASIC2.3□□□□□ -2.04
Clp1Q99LI9 Gm22403-201ENSMUST00000174919 84 ntBASIC2.3□□□□□ -2.04
Clp1Q99LI9 Gm22638-201ENSMUST00000179674 107 ntBASIC2.3□□□□□ -2.04
Clp1Q99LI9 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Clp1Q99LI9 Gm23109-201ENSMUST00000116867 126 ntBASIC2.29□□□□□ -2.04
Clp1Q99LI9 Gm14674-201ENSMUST00000117816 342 ntBASIC2.29□□□□□ -2.04
Clp1Q99LI9 Gm16539-201ENSMUST00000160086 327 ntBASIC2.29□□□□□ -2.04
Clp1Q99LI9 Mir3061-201ENSMUST00000175129 91 ntBASIC2.29□□□□□ -2.04
Clp1Q99LI9 Gm25035-201ENSMUST00000175414 77 ntBASIC2.29□□□□□ -2.04
Clp1Q99LI9 Gm27443-201ENSMUST00000184660 98 ntBASIC2.29□□□□□ -2.04
Clp1Q99LI9 Gm44807-201ENSMUST00000206115 154 ntBASIC2.29□□□□□ -2.04
Clp1Q99LI9 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 136.7 ms