Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Mir5104-201ENSMUST00000175319 94 ntBASIC2.01□□□□□ -2.09
Pcdha1Q91Y21 Gm8034-201ENSMUST00000178853 132 ntBASIC2.01□□□□□ -2.09
Pcdha1Q91Y21 Mir6377-201ENSMUST00000183760 114 ntBASIC2.01□□□□□ -2.09
Pcdha1Q91Y21 Gm37330-201ENSMUST00000192606 153 ntBASIC2.01□□□□□ -2.09
Pcdha1Q91Y21 Gm26379-202ENSMUST00000200225 132 ntBASIC2.01□□□□□ -2.09
Pcdha1Q91Y21 Gm42844-201ENSMUST00000200355 112 ntBASIC2.01□□□□□ -2.09
Pcdha1Q91Y21 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.01□□□□□ -2.09
Pcdha1Q91Y21 Gm23095-201ENSMUST00000083446 107 ntBASIC2.01□□□□□ -2.09
Pcdha1Q91Y21 Mir369-201ENSMUST00000083627 79 ntBASIC2.01□□□□□ -2.09
Pcdha1Q91Y21 Mir654-201ENSMUST00000104787 84 ntBASIC2□□□□□ -2.09
Pcdha1Q91Y21 Gm11792-201ENSMUST00000120640 168 ntBASIC2□□□□□ -2.09
Pcdha1Q91Y21 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2□□□□□ -2.09
Pcdha1Q91Y21 Mir7225-201ENSMUST00000184178 54 ntBASIC2□□□□□ -2.09
Pcdha1Q91Y21 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Pcdha1Q91Y21 Gm23469-201ENSMUST00000157131 104 ntBASIC1.99□□□□□ -2.09
Pcdha1Q91Y21 Gm24880-201ENSMUST00000158776 85 ntBASIC1.99□□□□□ -2.09
Pcdha1Q91Y21 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Pcdha1Q91Y21 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.99□□□□□ -2.09
Pcdha1Q91Y21 AC136457.1-201ENSMUST00000224195 156 ntBASIC1.99□□□□□ -2.09
Pcdha1Q91Y21 Gm22723-201ENSMUST00000083820 129 ntBASIC1.99□□□□□ -2.09
Pcdha1Q91Y21 Gm25684-201ENSMUST00000083941 107 ntBASIC1.99□□□□□ -2.09
Pcdha1Q91Y21 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Pcdha1Q91Y21 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.98□□□□□ -2.09
Pcdha1Q91Y21 Gm25377-201ENSMUST00000104334 129 ntBASIC1.98□□□□□ -2.09
Pcdha1Q91Y21 Gm24394-201ENSMUST00000158141 123 ntBASIC1.98□□□□□ -2.09
Pcdha1Q91Y21 Gm25241-201ENSMUST00000174909 84 ntBASIC1.98□□□□□ -2.09
Pcdha1Q91Y21 Mir3061-201ENSMUST00000175129 91 ntBASIC1.98□□□□□ -2.09
Pcdha1Q91Y21 Gm26217-201ENSMUST00000175212 84 ntBASIC1.98□□□□□ -2.09
Pcdha1Q91Y21 Gm22070-201ENSMUST00000178475 107 ntBASIC1.98□□□□□ -2.09
Pcdha1Q91Y21 Mir6379-201ENSMUST00000183392 115 ntBASIC1.98□□□□□ -2.09
Pcdha1Q91Y21 Gm42795-201ENSMUST00000198847 76 ntBASIC1.98□□□□□ -2.09
Pcdha1Q91Y21 Gm26922-201ENSMUST00000082687 72 ntBASIC1.98□□□□□ -2.09
Pcdha1Q91Y21 Gm26123-201ENSMUST00000083363 135 ntBASIC1.98□□□□□ -2.09
Pcdha1Q91Y21 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm12086-201ENSMUST00000120863 228 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm23083-201ENSMUST00000157851 116 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm16539-201ENSMUST00000160086 327 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm22403-201ENSMUST00000174919 84 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm23375-201ENSMUST00000175407 83 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm25098-201ENSMUST00000177580 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm23356-201ENSMUST00000177610 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm24027-201ENSMUST00000177611 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm22511-201ENSMUST00000177628 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm22630-201ENSMUST00000177781 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm23560-201ENSMUST00000177782 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm25462-201ENSMUST00000177833 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm26059-201ENSMUST00000177865 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm22255-201ENSMUST00000177933 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm25146-201ENSMUST00000177976 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm25523-201ENSMUST00000178044 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm24585-201ENSMUST00000178104 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm22627-201ENSMUST00000178127 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm22912-201ENSMUST00000178242 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm24866-201ENSMUST00000178338 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm22524-201ENSMUST00000178357 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm25710-201ENSMUST00000178367 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm23575-201ENSMUST00000178406 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm24872-201ENSMUST00000178434 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm22449-201ENSMUST00000178924 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm24702-201ENSMUST00000178965 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm24206-201ENSMUST00000179011 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm24528-201ENSMUST00000179164 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm22909-201ENSMUST00000179190 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm26334-201ENSMUST00000179403 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm25463-201ENSMUST00000179405 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm25742-201ENSMUST00000179530 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm25209-201ENSMUST00000179576 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm26392-201ENSMUST00000179661 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm25230-201ENSMUST00000179740 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm26434-201ENSMUST00000179778 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm25741-201ENSMUST00000179825 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm24759-201ENSMUST00000179827 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm24219-201ENSMUST00000179861 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm5900-201ENSMUST00000179862 375 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm25402-201ENSMUST00000082966 131 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm23254-201ENSMUST00000097244 79 ntBASIC1.97□□□□□ -2.09
Pcdha1Q91Y21 Gm25611-201ENSMUST00000104017 133 ntBASIC1.96□□□□□ -2.1
Pcdha1Q91Y21 Gm22196-201ENSMUST00000116865 109 ntBASIC1.96□□□□□ -2.1
Pcdha1Q91Y21 Gm25889-201ENSMUST00000157775 107 ntBASIC1.96□□□□□ -2.1
Pcdha1Q91Y21 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.96□□□□□ -2.1
Pcdha1Q91Y21 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
Pcdha1Q91Y21 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Pcdha1Q91Y21 Gm24913-201ENSMUST00000157286 107 ntBASIC1.95□□□□□ -2.1
Pcdha1Q91Y21 Gm25423-201ENSMUST00000157609 107 ntBASIC1.95□□□□□ -2.1
Pcdha1Q91Y21 Gm22425-201ENSMUST00000158532 138 ntBASIC1.95□□□□□ -2.1
Pcdha1Q91Y21 Gm25044-201ENSMUST00000158603 104 ntBASIC1.95□□□□□ -2.1
Pcdha1Q91Y21 Gm21885-201ENSMUST00000178891 327 ntBASIC1.95□□□□□ -2.1
Pcdha1Q91Y21 Mir7679-201ENSMUST00000183379 63 ntBASIC1.95□□□□□ -2.1
Pcdha1Q91Y21 AC126939.1-201ENSMUST00000224943 226 ntBASIC1.95□□□□□ -2.1
Pcdha1Q91Y21 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Pcdha1Q91Y21 Gm22815-201ENSMUST00000157451 62 ntBASIC1.94□□□□□ -2.1
Pcdha1Q91Y21 Gm25011-201ENSMUST00000158398 126 ntBASIC1.94□□□□□ -2.1
Pcdha1Q91Y21 Gm25444-201ENSMUST00000158999 113 ntBASIC1.94□□□□□ -2.1
Pcdha1Q91Y21 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.94□□□□□ -2.1
Pcdha1Q91Y21 Gm26498-201ENSMUST00000177799 79 ntBASIC1.94□□□□□ -2.1
Pcdha1Q91Y21 Gm26230-201ENSMUST00000180141 79 ntBASIC1.94□□□□□ -2.1
Pcdha1Q91Y21 Mir6950-201ENSMUST00000184438 73 ntBASIC1.94□□□□□ -2.1
Pcdha1Q91Y21 Mir7678-201ENSMUST00000185076 71 ntBASIC1.94□□□□□ -2.1
Pcdha1Q91Y21 Gm22055-201ENSMUST00000083388 107 ntBASIC1.94□□□□□ -2.1
Pcdha1Q91Y21 Mir30d-201ENSMUST00000083503 82 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 137 ms