Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm37330-201ENSMUST00000192606 153 ntBASIC1.84□□□□□ -2.11
Clrn1Q8K445 Mir7217-201ENSMUST00000200304 62 ntBASIC1.84□□□□□ -2.11
Clrn1Q8K445 Gm45268-201ENSMUST00000210046 370 ntBASIC1.84□□□□□ -2.11
Clrn1Q8K445 AC126939.1-201ENSMUST00000224943 226 ntBASIC1.84□□□□□ -2.11
Clrn1Q8K445 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.84□□□□□ -2.11
Clrn1Q8K445 Gm23011-201ENSMUST00000104148 132 ntBASIC1.83□□□□□ -2.12
Clrn1Q8K445 Gm13433-201ENSMUST00000121701 240 ntBASIC1.83□□□□□ -2.12
Clrn1Q8K445 Gm25658-201ENSMUST00000158472 128 ntBASIC1.83□□□□□ -2.12
Clrn1Q8K445 Gm25444-201ENSMUST00000158999 113 ntBASIC1.83□□□□□ -2.12
Clrn1Q8K445 Mir6377-201ENSMUST00000183760 114 ntBASIC1.83□□□□□ -2.12
Clrn1Q8K445 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.83□□□□□ -2.12
Clrn1Q8K445 Gm22055-201ENSMUST00000083388 107 ntBASIC1.83□□□□□ -2.12
Clrn1Q8K445 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Clrn1Q8K445 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.82□□□□□ -2.12
Clrn1Q8K445 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Clrn1Q8K445 Gm16328-201ENSMUST00000126985 196 ntBASIC1.82□□□□□ -2.12
Clrn1Q8K445 Gm24238-201ENSMUST00000157792 98 ntBASIC1.82□□□□□ -2.12
Clrn1Q8K445 Gm25730-201ENSMUST00000178753 165 ntBASIC1.82□□□□□ -2.12
Clrn1Q8K445 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Clrn1Q8K445 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.82□□□□□ -2.12
Clrn1Q8K445 Gm24805-201ENSMUST00000082931 104 ntBASIC1.82□□□□□ -2.12
Clrn1Q8K445 Mir322-201ENSMUST00000083484 95 ntBASIC1.82□□□□□ -2.12
Clrn1Q8K445 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Clrn1Q8K445 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Clrn1Q8K445 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.81□□□□□ -2.12
Clrn1Q8K445 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Clrn1Q8K445 Gm15692-201ENSMUST00000152173 352 ntBASIC1.81□□□□□ -2.12
Clrn1Q8K445 Gm22490-201ENSMUST00000157188 119 ntBASIC1.81□□□□□ -2.12
Clrn1Q8K445 Gm24913-201ENSMUST00000157286 107 ntBASIC1.81□□□□□ -2.12
Clrn1Q8K445 Mir6950-201ENSMUST00000184438 73 ntBASIC1.81□□□□□ -2.12
Clrn1Q8K445 Mir7226-201ENSMUST00000184953 60 ntBASIC1.81□□□□□ -2.12
Clrn1Q8K445 Gm42795-201ENSMUST00000198847 76 ntBASIC1.81□□□□□ -2.12
Clrn1Q8K445 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.81□□□□□ -2.12
Clrn1Q8K445 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Clrn1Q8K445 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Clrn1Q8K445 Gm25949-201ENSMUST00000175333 114 ntBASIC1.8□□□□□ -2.12
Clrn1Q8K445 Gm24572-201ENSMUST00000175505 88 ntBASIC1.8□□□□□ -2.12
Clrn1Q8K445 Mir6406-201ENSMUST00000183592 120 ntBASIC1.8□□□□□ -2.12
Clrn1Q8K445 Mir6997-201ENSMUST00000184313 71 ntBASIC1.8□□□□□ -2.12
Clrn1Q8K445 Gm43324-201ENSMUST00000197482 289 ntBASIC1.8□□□□□ -2.12
Clrn1Q8K445 mt-Ts2-201ENSMUST00000082416 59 ntBASIC1.8□□□□□ -2.12
Clrn1Q8K445 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.8□□□□□ -2.12
Clrn1Q8K445 Gm26498-201ENSMUST00000177799 79 ntBASIC1.79□□□□□ -2.12
Clrn1Q8K445 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.79□□□□□ -2.12
Clrn1Q8K445 Gm26230-201ENSMUST00000180141 79 ntBASIC1.79□□□□□ -2.12
Clrn1Q8K445 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.79□□□□□ -2.12
Clrn1Q8K445 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Clrn1Q8K445 Gm25090-201ENSMUST00000104000 132 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Gm22803-201ENSMUST00000158049 283 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Gm24880-201ENSMUST00000158776 85 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Mir5104-201ENSMUST00000175319 94 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Gm25380-201ENSMUST00000175463 107 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Gm24641-201ENSMUST00000178055 107 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Gm25484-201ENSMUST00000178217 107 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Gm26138-201ENSMUST00000179236 107 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Gm22821-201ENSMUST00000179288 107 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Gm7258-201ENSMUST00000179317 300 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Gm27517-201ENSMUST00000184347 236 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Mir7017-201ENSMUST00000184894 62 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Gm44462-201ENSMUST00000199696 129 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Gm23140-201ENSMUST00000082487 107 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Gm23298-201ENSMUST00000083181 107 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Gm24614-201ENSMUST00000083269 107 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Gm26123-201ENSMUST00000083363 135 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Gm22057-201ENSMUST00000083387 107 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Gm25516-201ENSMUST00000083857 107 ntBASIC1.78□□□□□ -2.12
Clrn1Q8K445 Gm22031-201ENSMUST00000116945 126 ntBASIC1.77□□□□□ -2.13
Clrn1Q8K445 Gm23375-201ENSMUST00000175407 83 ntBASIC1.77□□□□□ -2.13
Clrn1Q8K445 Mir6379-201ENSMUST00000183392 115 ntBASIC1.77□□□□□ -2.13
Clrn1Q8K445 Mir7009-201ENSMUST00000184519 64 ntBASIC1.77□□□□□ -2.13
Clrn1Q8K445 Mir6901-201ENSMUST00000185062 62 ntBASIC1.77□□□□□ -2.13
Clrn1Q8K445 Mir3569-201ENSMUST00000185080 58 ntBASIC1.77□□□□□ -2.13
Clrn1Q8K445 Gm26379-202ENSMUST00000200225 132 ntBASIC1.77□□□□□ -2.13
Clrn1Q8K445 Gm45429-201ENSMUST00000209527 172 ntBASIC1.77□□□□□ -2.13
Clrn1Q8K445 Gm23100-201ENSMUST00000083455 141 ntBASIC1.77□□□□□ -2.13
Clrn1Q8K445 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Clrn1Q8K445 Mir654-201ENSMUST00000104787 84 ntBASIC1.76□□□□□ -2.13
Clrn1Q8K445 Gm24478-201ENSMUST00000157439 158 ntBASIC1.76□□□□□ -2.13
Clrn1Q8K445 Gm22815-201ENSMUST00000157451 62 ntBASIC1.76□□□□□ -2.13
Clrn1Q8K445 Gm22425-201ENSMUST00000158532 138 ntBASIC1.76□□□□□ -2.13
Clrn1Q8K445 Gm25044-201ENSMUST00000158603 104 ntBASIC1.76□□□□□ -2.13
Clrn1Q8K445 Gm16539-201ENSMUST00000160086 327 ntBASIC1.76□□□□□ -2.13
Clrn1Q8K445 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.76□□□□□ -2.13
Clrn1Q8K445 Gm23299-201ENSMUST00000082708 79 ntBASIC1.76□□□□□ -2.13
Clrn1Q8K445 Gm25611-201ENSMUST00000104017 133 ntBASIC1.75□□□□□ -2.13
Clrn1Q8K445 Gm23469-201ENSMUST00000157131 104 ntBASIC1.75□□□□□ -2.13
Clrn1Q8K445 Gm25011-201ENSMUST00000158398 126 ntBASIC1.75□□□□□ -2.13
Clrn1Q8K445 Gm25241-201ENSMUST00000174909 84 ntBASIC1.75□□□□□ -2.13
Clrn1Q8K445 Gm22403-201ENSMUST00000174919 84 ntBASIC1.75□□□□□ -2.13
Clrn1Q8K445 Gm26217-201ENSMUST00000175212 84 ntBASIC1.75□□□□□ -2.13
Clrn1Q8K445 Gm22638-201ENSMUST00000179674 107 ntBASIC1.75□□□□□ -2.13
Clrn1Q8K445 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.75□□□□□ -2.13
Clrn1Q8K445 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.75□□□□□ -2.13
Clrn1Q8K445 Snora2b-201ENSMUST00000084005 137 ntBASIC1.75□□□□□ -2.13
Clrn1Q8K445 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Clrn1Q8K445 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.74□□□□□ -2.13
Clrn1Q8K445 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Clrn1Q8K445 Gm23654-201ENSMUST00000116758 126 ntBASIC1.74□□□□□ -2.13
Clrn1Q8K445 Gm14674-201ENSMUST00000117816 342 ntBASIC1.74□□□□□ -2.13
Clrn1Q8K445 Gm28270-201ENSMUST00000188550 109 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 237.4 ms