Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm20409-201ENSMUST00000173457 130 ntBASIC2.62□□□□□ -1.99
Usp40Q8BWR4 Gm23190-201ENSMUST00000180307 64 ntBASIC2.62□□□□□ -1.99
Usp40Q8BWR4 Mir6352-201ENSMUST00000184495 116 ntBASIC2.62□□□□□ -1.99
Usp40Q8BWR4 Gm44491-201ENSMUST00000196794 96 ntBASIC2.62□□□□□ -1.99
Usp40Q8BWR4 AC132833.2-201ENSMUST00000228699 157 ntBASIC2.62□□□□□ -1.99
Usp40Q8BWR4 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Usp40Q8BWR4 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.62□□□□□ -1.99
Usp40Q8BWR4 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Usp40Q8BWR4 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Usp40Q8BWR4 Mir542-201ENSMUST00000102186 85 ntBASIC2.61□□□□□ -1.99
Usp40Q8BWR4 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.61□□□□□ -1.99
Usp40Q8BWR4 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.61□□□□□ -1.99
Usp40Q8BWR4 Gm14671-201ENSMUST00000121790 262 ntBASIC2.61□□□□□ -1.99
Usp40Q8BWR4 Gm23468-201ENSMUST00000157125 108 ntBASIC2.61□□□□□ -1.99
Usp40Q8BWR4 Gm22279-201ENSMUST00000157200 93 ntBASIC2.61□□□□□ -1.99
Usp40Q8BWR4 Gm24475-201ENSMUST00000157435 143 ntBASIC2.61□□□□□ -1.99
Usp40Q8BWR4 Gm25796-201ENSMUST00000082645 163 ntBASIC2.61□□□□□ -1.99
Usp40Q8BWR4 Gm25199-201ENSMUST00000083095 104 ntBASIC2.61□□□□□ -1.99
Usp40Q8BWR4 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Usp40Q8BWR4 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Usp40Q8BWR4 Gm23715-201ENSMUST00000157354 106 ntBASIC2.6□□□□□ -1.99
Usp40Q8BWR4 Gm23351-201ENSMUST00000158427 125 ntBASIC2.6□□□□□ -1.99
Usp40Q8BWR4 Mir6377-201ENSMUST00000183760 114 ntBASIC2.6□□□□□ -1.99
Usp40Q8BWR4 Mir7678-201ENSMUST00000185076 71 ntBASIC2.6□□□□□ -1.99
Usp40Q8BWR4 Gm25627-201ENSMUST00000084003 153 ntBASIC2.6□□□□□ -1.99
Usp40Q8BWR4 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.6□□□□□ -1.99
Usp40Q8BWR4 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.6□□□□□ -1.99
Usp40Q8BWR4 Gm26339-201ENSMUST00000102368 99 ntBASIC2.59□□□□□ -1.99
Usp40Q8BWR4 Gm22672-201ENSMUST00000104414 134 ntBASIC2.59□□□□□ -1.99
Usp40Q8BWR4 Gm22486-201ENSMUST00000116815 137 ntBASIC2.59□□□□□ -1.99
Usp40Q8BWR4 Gm25945-201ENSMUST00000122484 135 ntBASIC2.59□□□□□ -1.99
Usp40Q8BWR4 Gm23838-201ENSMUST00000158067 162 ntBASIC2.59□□□□□ -1.99
Usp40Q8BWR4 Mir1931-201ENSMUST00000158589 119 ntBASIC2.59□□□□□ -1.99
Usp40Q8BWR4 Gm24674-201ENSMUST00000179194 104 ntBASIC2.59□□□□□ -1.99
Usp40Q8BWR4 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.59□□□□□ -1.99
Usp40Q8BWR4 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.59□□□□□ -1.99
Usp40Q8BWR4 Gm22706-201ENSMUST00000157907 112 ntBASIC2.58□□□□□ -2
Usp40Q8BWR4 Gm23289-201ENSMUST00000175615 108 ntBASIC2.58□□□□□ -2
Usp40Q8BWR4 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.58□□□□□ -2
Usp40Q8BWR4 Gm24044-201ENSMUST00000083107 156 ntBASIC2.58□□□□□ -2
Usp40Q8BWR4 Snora33-201ENSMUST00000093556 129 ntBASIC2.58□□□□□ -2
Usp40Q8BWR4 Gm14882-201ENSMUST00000117216 218 ntBASIC2.57□□□□□ -2
Usp40Q8BWR4 Gm14937-201ENSMUST00000119709 208 ntBASIC2.57□□□□□ -2
Usp40Q8BWR4 Gm24598-201ENSMUST00000122510 74 ntBASIC2.57□□□□□ -2
Usp40Q8BWR4 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.57□□□□□ -2
Usp40Q8BWR4 Gm25976-201ENSMUST00000158695 130 ntBASIC2.57□□□□□ -2
Usp40Q8BWR4 Gm25449-201ENSMUST00000179389 79 ntBASIC2.57□□□□□ -2
Usp40Q8BWR4 Gm26109-201ENSMUST00000083970 70 ntBASIC2.57□□□□□ -2
Usp40Q8BWR4 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.57□□□□□ -2
Usp40Q8BWR4 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.56□□□□□ -2
Usp40Q8BWR4 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.56□□□□□ -2
Usp40Q8BWR4 Gm23065-201ENSMUST00000158236 130 ntBASIC2.56□□□□□ -2
Usp40Q8BWR4 Traj61-201ENSMUST00000165025 72 ntBASIC2.56□□□□□ -2
Usp40Q8BWR4 Gm23369-201ENSMUST00000175406 105 ntBASIC2.56□□□□□ -2
Usp40Q8BWR4 Gm23090-201ENSMUST00000177331 78 ntBASIC2.56□□□□□ -2
Usp40Q8BWR4 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Usp40Q8BWR4 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC2.55□□□□□ -2
Usp40Q8BWR4 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.55□□□□□ -2
Usp40Q8BWR4 Gm45522-201ENSMUST00000210784 166 ntBASIC2.55□□□□□ -2
Usp40Q8BWR4 AC140930.2-201ENSMUST00000221803 109 ntBASIC2.55□□□□□ -2
Usp40Q8BWR4 Gm23377-201ENSMUST00000082943 126 ntBASIC2.55□□□□□ -2
Usp40Q8BWR4 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Usp40Q8BWR4 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.54□□□□□ -2
Usp40Q8BWR4 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.54□□□□□ -2
Usp40Q8BWR4 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.54□□□□□ -2
Usp40Q8BWR4 Gm25884-201ENSMUST00000157782 62 ntBASIC2.54□□□□□ -2
Usp40Q8BWR4 Gm24637-201ENSMUST00000158674 85 ntBASIC2.54□□□□□ -2
Usp40Q8BWR4 Gm22503-201ENSMUST00000158983 115 ntBASIC2.54□□□□□ -2
Usp40Q8BWR4 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.54□□□□□ -2
Usp40Q8BWR4 Gm23917-201ENSMUST00000175256 98 ntBASIC2.54□□□□□ -2
Usp40Q8BWR4 Gm7214-201ENSMUST00000222428 272 ntBASIC2.54□□□□□ -2
Usp40Q8BWR4 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.54□□□□□ -2
Usp40Q8BWR4 Mir411-201ENSMUST00000083543 82 ntBASIC2.54□□□□□ -2
Usp40Q8BWR4 Gm25113-201ENSMUST00000157185 143 ntBASIC2.53□□□□□ -2
Usp40Q8BWR4 Rnu7-201ENSMUST00000158458 62 ntBASIC2.53□□□□□ -2
Usp40Q8BWR4 Gm25354-201ENSMUST00000179110 105 ntBASIC2.53□□□□□ -2
Usp40Q8BWR4 Gm26073-201ENSMUST00000179906 127 ntBASIC2.53□□□□□ -2
Usp40Q8BWR4 Gm44325-201ENSMUST00000196757 77 ntBASIC2.53□□□□□ -2
Usp40Q8BWR4 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.53□□□□□ -2
Usp40Q8BWR4 Mir34a-201ENSMUST00000083559 102 ntBASIC2.53□□□□□ -2
Usp40Q8BWR4 Snord80-201ENSMUST00000083801 81 ntBASIC2.53□□□□□ -2
Usp40Q8BWR4 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Usp40Q8BWR4 Mir1187-201ENSMUST00000116936 122 ntBASIC2.52□□□□□ -2.01
Usp40Q8BWR4 Gm23986-201ENSMUST00000157144 63 ntBASIC2.52□□□□□ -2.01
Usp40Q8BWR4 Gm26150-201ENSMUST00000157426 151 ntBASIC2.52□□□□□ -2.01
Usp40Q8BWR4 Gm24345-201ENSMUST00000158706 124 ntBASIC2.52□□□□□ -2.01
Usp40Q8BWR4 Mir5619-201ENSMUST00000176065 61 ntBASIC2.52□□□□□ -2.01
Usp40Q8BWR4 Gm44408-201ENSMUST00000200205 66 ntBASIC2.52□□□□□ -2.01
Usp40Q8BWR4 Gm26379-202ENSMUST00000200225 132 ntBASIC2.52□□□□□ -2.01
Usp40Q8BWR4 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Usp40Q8BWR4 Gm25061-201ENSMUST00000104665 107 ntBASIC2.51□□□□□ -2.01
Usp40Q8BWR4 Gm22387-201ENSMUST00000158191 131 ntBASIC2.51□□□□□ -2.01
Usp40Q8BWR4 Gm22605-201ENSMUST00000158289 108 ntBASIC2.51□□□□□ -2.01
Usp40Q8BWR4 Gm24801-201ENSMUST00000178503 105 ntBASIC2.51□□□□□ -2.01
Usp40Q8BWR4 Gm24638-201ENSMUST00000179807 132 ntBASIC2.51□□□□□ -2.01
Usp40Q8BWR4 Gm27898-201ENSMUST00000183987 80 ntBASIC2.51□□□□□ -2.01
Usp40Q8BWR4 Gm45268-201ENSMUST00000210046 370 ntBASIC2.51□□□□□ -2.01
Usp40Q8BWR4 Gm19118-201ENSMUST00000222554 98 ntBASIC2.51□□□□□ -2.01
Usp40Q8BWR4 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.5□□□□□ -2.01
Usp40Q8BWR4 Gm12309-201ENSMUST00000119889 182 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 172.1 ms