Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm23005-201ENSMUST00000158950 136 ntBASIC2.29□□□□□ -2.04
Ubp1Q811S7 Gm42795-201ENSMUST00000198847 76 ntBASIC2.29□□□□□ -2.04
Ubp1Q811S7 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.29□□□□□ -2.04
Ubp1Q811S7 Gm26015-201ENSMUST00000104402 125 ntBASIC2.28□□□□□ -2.04
Ubp1Q811S7 Gm25529-201ENSMUST00000104850 92 ntBASIC2.28□□□□□ -2.04
Ubp1Q811S7 Mir3075-201ENSMUST00000175340 85 ntBASIC2.28□□□□□ -2.04
Ubp1Q811S7 Gm23419-201ENSMUST00000175523 84 ntBASIC2.28□□□□□ -2.04
Ubp1Q811S7 Gm28270-201ENSMUST00000188550 109 ntBASIC2.28□□□□□ -2.04
Ubp1Q811S7 Gm28328-201ENSMUST00000188869 109 ntBASIC2.28□□□□□ -2.04
Ubp1Q811S7 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.28□□□□□ -2.04
Ubp1Q811S7 Gm25038-201ENSMUST00000082928 130 ntBASIC2.28□□□□□ -2.04
Ubp1Q811S7 Snord7-201ENSMUST00000083781 97 ntBASIC2.28□□□□□ -2.04
Ubp1Q811S7 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Ubp1Q811S7 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Ubp1Q811S7 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.28□□□□□ -2.04
Ubp1Q811S7 Gm23170-201ENSMUST00000157158 106 ntBASIC2.27□□□□□ -2.05
Ubp1Q811S7 Traj61-201ENSMUST00000165025 72 ntBASIC2.27□□□□□ -2.05
Ubp1Q811S7 Mir7050-201ENSMUST00000184636 60 ntBASIC2.27□□□□□ -2.05
Ubp1Q811S7 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.27□□□□□ -2.05
Ubp1Q811S7 Mir127-201ENSMUST00000093568 70 ntBASIC2.27□□□□□ -2.05
Ubp1Q811S7 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.27□□□□□ -2.05
Ubp1Q811S7 Gm11248-201ENSMUST00000119568 201 ntBASIC2.26□□□□□ -2.05
Ubp1Q811S7 Gm22947-201ENSMUST00000158559 91 ntBASIC2.26□□□□□ -2.05
Ubp1Q811S7 Gm25707-201ENSMUST00000175120 96 ntBASIC2.26□□□□□ -2.05
Ubp1Q811S7 Gm43722-201ENSMUST00000196054 124 ntBASIC2.26□□□□□ -2.05
Ubp1Q811S7 Mir7021-201ENSMUST00000197026 63 ntBASIC2.26□□□□□ -2.05
Ubp1Q811S7 Mir497-201ENSMUST00000200557 84 ntBASIC2.26□□□□□ -2.05
Ubp1Q811S7 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.26□□□□□ -2.05
Ubp1Q811S7 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.26□□□□□ -2.05
Ubp1Q811S7 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Ubp1Q811S7 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Ubp1Q811S7 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.25□□□□□ -2.05
Ubp1Q811S7 Gm23033-201ENSMUST00000157996 134 ntBASIC2.25□□□□□ -2.05
Ubp1Q811S7 Gm22011-201ENSMUST00000158790 123 ntBASIC2.25□□□□□ -2.05
Ubp1Q811S7 Mir7014-201ENSMUST00000183853 63 ntBASIC2.25□□□□□ -2.05
Ubp1Q811S7 Trbv7-201ENSMUST00000193339 402 ntBASIC2.25□□□□□ -2.05
Ubp1Q811S7 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Ubp1Q811S7 Snora41-201ENSMUST00000082668 132 ntBASIC2.25□□□□□ -2.05
Ubp1Q811S7 Gm24468-201ENSMUST00000104489 104 ntBASIC2.24□□□□□ -2.05
Ubp1Q811S7 Gm24937-201ENSMUST00000122597 134 ntBASIC2.24□□□□□ -2.05
Ubp1Q811S7 Gm24877-201ENSMUST00000158779 116 ntBASIC2.24□□□□□ -2.05
Ubp1Q811S7 Mir3069-201ENSMUST00000198802 65 ntBASIC2.24□□□□□ -2.05
Ubp1Q811S7 Gm22914-201ENSMUST00000175195 77 ntBASIC2.23□□□□□ -2.05
Ubp1Q811S7 Mir6925-201ENSMUST00000197857 70 ntBASIC2.23□□□□□ -2.05
Ubp1Q811S7 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.23□□□□□ -2.05
Ubp1Q811S7 Gm23299-201ENSMUST00000082708 79 ntBASIC2.23□□□□□ -2.05
Ubp1Q811S7 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
Ubp1Q811S7 Gm25069-201ENSMUST00000175238 86 ntBASIC2.22□□□□□ -2.05
Ubp1Q811S7 Gm27399-201ENSMUST00000184250 78 ntBASIC2.22□□□□□ -2.05
Ubp1Q811S7 Mir7232-201ENSMUST00000197929 74 ntBASIC2.22□□□□□ -2.05
Ubp1Q811S7 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.22□□□□□ -2.05
Ubp1Q811S7 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.22□□□□□ -2.05
Ubp1Q811S7 Gm26280-201ENSMUST00000157096 101 ntBASIC2.21□□□□□ -2.06
Ubp1Q811S7 Gm24313-201ENSMUST00000082561 133 ntBASIC2.21□□□□□ -2.06
Ubp1Q811S7 Gm23507-201ENSMUST00000083078 107 ntBASIC2.21□□□□□ -2.06
Ubp1Q811S7 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Ubp1Q811S7 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Ubp1Q811S7 Gm24229-201ENSMUST00000158830 118 ntBASIC2.2□□□□□ -2.06
Ubp1Q811S7 Gm20118-201ENSMUST00000187207 162 ntBASIC2.2□□□□□ -2.06
Ubp1Q811S7 Gm28256-201ENSMUST00000188953 139 ntBASIC2.2□□□□□ -2.06
Ubp1Q811S7 Gm28559-201ENSMUST00000190532 139 ntBASIC2.2□□□□□ -2.06
Ubp1Q811S7 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.2□□□□□ -2.06
Ubp1Q811S7 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.19□□□□□ -2.06
Ubp1Q811S7 Gm24401-201ENSMUST00000157868 91 ntBASIC2.19□□□□□ -2.06
Ubp1Q811S7 Gm22929-201ENSMUST00000175517 107 ntBASIC2.19□□□□□ -2.06
Ubp1Q811S7 Gm28862-201ENSMUST00000188246 163 ntBASIC2.19□□□□□ -2.06
Ubp1Q811S7 Gm25402-201ENSMUST00000082966 131 ntBASIC2.19□□□□□ -2.06
Ubp1Q811S7 Mir423-201ENSMUST00000083584 109 ntBASIC2.19□□□□□ -2.06
Ubp1Q811S7 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Ubp1Q811S7 Gm26421-201ENSMUST00000104279 132 ntBASIC2.18□□□□□ -2.06
Ubp1Q811S7 Gm22031-201ENSMUST00000116945 126 ntBASIC2.18□□□□□ -2.06
Ubp1Q811S7 Gm15654-201ENSMUST00000152660 300 ntBASIC2.18□□□□□ -2.06
Ubp1Q811S7 Gm24649-201ENSMUST00000157106 134 ntBASIC2.18□□□□□ -2.06
Ubp1Q811S7 Gm44477-201ENSMUST00000199661 110 ntBASIC2.18□□□□□ -2.06
Ubp1Q811S7 Gm42935-201ENSMUST00000202004 151 ntBASIC2.18□□□□□ -2.06
Ubp1Q811S7 Snord1a-201ENSMUST00000083160 74 ntBASIC2.18□□□□□ -2.06
Ubp1Q811S7 Gm24661-201ENSMUST00000083205 104 ntBASIC2.18□□□□□ -2.06
Ubp1Q811S7 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Ubp1Q811S7 Mir544-201ENSMUST00000103813 78 ntBASIC2.17□□□□□ -2.06
Ubp1Q811S7 Gm25377-201ENSMUST00000104334 129 ntBASIC2.17□□□□□ -2.06
Ubp1Q811S7 Gm14674-201ENSMUST00000117816 342 ntBASIC2.17□□□□□ -2.06
Ubp1Q811S7 Gm23986-201ENSMUST00000157144 63 ntBASIC2.17□□□□□ -2.06
Ubp1Q811S7 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Ubp1Q811S7 Gm27645-201ENSMUST00000183348 77 ntBASIC2.17□□□□□ -2.06
Ubp1Q811S7 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC2.17□□□□□ -2.06
Ubp1Q811S7 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Ubp1Q811S7 Gm22772-201ENSMUST00000104451 121 ntBASIC2.16□□□□□ -2.06
Ubp1Q811S7 Gm22083-201ENSMUST00000157586 102 ntBASIC2.16□□□□□ -2.06
Ubp1Q811S7 Gm25887-201ENSMUST00000157777 84 ntBASIC2.16□□□□□ -2.06
Ubp1Q811S7 Gm25642-201ENSMUST00000175137 66 ntBASIC2.16□□□□□ -2.06
Ubp1Q811S7 Mir7068-201ENSMUST00000183439 74 ntBASIC2.16□□□□□ -2.06
Ubp1Q811S7 Gm25796-201ENSMUST00000082645 163 ntBASIC2.16□□□□□ -2.06
Ubp1Q811S7 Gm6444-201ENSMUST00000119611 458 ntBASIC2.15□□□□□ -2.07
Ubp1Q811S7 n-R5s63-201ENSMUST00000122756 103 ntBASIC2.15□□□□□ -2.07
Ubp1Q811S7 Gm15692-201ENSMUST00000152173 352 ntBASIC2.15□□□□□ -2.07
Ubp1Q811S7 Gm25329-201ENSMUST00000158041 126 ntBASIC2.15□□□□□ -2.07
Ubp1Q811S7 Gm16561-201ENSMUST00000163001 192 ntBASIC2.15□□□□□ -2.07
Ubp1Q811S7 Gm22802-201ENSMUST00000175621 89 ntBASIC2.15□□□□□ -2.07
Ubp1Q811S7 AC122769.2-201ENSMUST00000227248 302 ntBASIC2.15□□□□□ -2.07
Ubp1Q811S7 Gm22750-201ENSMUST00000102076 103 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 155.7 ms