Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm22129-201ENSMUST00000179034 107 ntBASIC2.29□□□□□ -2.04
Trim28Q62318 Gm24638-201ENSMUST00000179807 132 ntBASIC2.29□□□□□ -2.04
Trim28Q62318 Mir6928-201ENSMUST00000185166 70 ntBASIC2.29□□□□□ -2.04
Trim28Q62318 Gm28669-201ENSMUST00000188400 100 ntBASIC2.29□□□□□ -2.04
Trim28Q62318 Gm45386-201ENSMUST00000210194 218 ntBASIC2.29□□□□□ -2.04
Trim28Q62318 Gm45456-201ENSMUST00000210841 243 ntBASIC2.29□□□□□ -2.04
Trim28Q62318 Gm7214-201ENSMUST00000222428 272 ntBASIC2.29□□□□□ -2.04
Trim28Q62318 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.29□□□□□ -2.04
Trim28Q62318 Mir423-201ENSMUST00000083584 109 ntBASIC2.29□□□□□ -2.04
Trim28Q62318 Gm25402-201ENSMUST00000082966 131 ntBASIC2.28□□□□□ -2.04
Trim28Q62318 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trim28Q62318 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
Trim28Q62318 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC2.27□□□□□ -2.05
Trim28Q62318 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC2.27□□□□□ -2.05
Trim28Q62318 Gm9156-201ENSMUST00000189660 463 ntBASIC2.27□□□□□ -2.05
Trim28Q62318 Gm18433-201ENSMUST00000192747 197 ntBASIC2.27□□□□□ -2.05
Trim28Q62318 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.27□□□□□ -2.05
Trim28Q62318 AL772271.1-201ENSMUST00000196848 65 ntBASIC2.27□□□□□ -2.05
Trim28Q62318 Gm3724-201ENSMUST00000197957 349 ntBASIC2.27□□□□□ -2.05
Trim28Q62318 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.27□□□□□ -2.05
Trim28Q62318 Gm25788-201ENSMUST00000082721 131 ntBASIC2.27□□□□□ -2.05
Trim28Q62318 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.26□□□□□ -2.05
Trim28Q62318 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Trim28Q62318 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Trim28Q62318 Gm24947-201ENSMUST00000158334 110 ntBASIC2.26□□□□□ -2.05
Trim28Q62318 Gm7258-201ENSMUST00000179317 300 ntBASIC2.26□□□□□ -2.05
Trim28Q62318 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.26□□□□□ -2.05
Trim28Q62318 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.26□□□□□ -2.05
Trim28Q62318 Snora41-201ENSMUST00000082668 132 ntBASIC2.26□□□□□ -2.05
Trim28Q62318 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.26□□□□□ -2.05
Trim28Q62318 Mir148b-201ENSMUST00000083626 97 ntBASIC2.26□□□□□ -2.05
Trim28Q62318 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Trim28Q62318 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2.26□□□□□ -2.05
Trim28Q62318 Gm45265-201ENSMUST00000210852 2497 ntBASIC2.25□□□□□ -2.05
Trim28Q62318 Gm24598-201ENSMUST00000122510 74 ntBASIC2.25□□□□□ -2.05
Trim28Q62318 Gm26181-201ENSMUST00000157687 106 ntBASIC2.25□□□□□ -2.05
Trim28Q62318 Gm25633-201ENSMUST00000178565 107 ntBASIC2.25□□□□□ -2.05
Trim28Q62318 Gm27898-201ENSMUST00000183987 80 ntBASIC2.25□□□□□ -2.05
Trim28Q62318 Gm27878-201ENSMUST00000184000 106 ntBASIC2.25□□□□□ -2.05
Trim28Q62318 Mir6950-201ENSMUST00000184438 73 ntBASIC2.25□□□□□ -2.05
Trim28Q62318 Gm22805-201ENSMUST00000082739 107 ntBASIC2.25□□□□□ -2.05
Trim28Q62318 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.25□□□□□ -2.05
Trim28Q62318 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.24□□□□□ -2.05
Trim28Q62318 Gm26339-201ENSMUST00000102368 99 ntBASIC2.24□□□□□ -2.05
Trim28Q62318 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.24□□□□□ -2.05
Trim28Q62318 Gm22319-201ENSMUST00000157147 122 ntBASIC2.24□□□□□ -2.05
Trim28Q62318 Gm23289-201ENSMUST00000175615 108 ntBASIC2.24□□□□□ -2.05
Trim28Q62318 Gm23090-201ENSMUST00000177331 78 ntBASIC2.24□□□□□ -2.05
Trim28Q62318 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.24□□□□□ -2.05
Trim28Q62318 Gm25832-201ENSMUST00000104140 130 ntBASIC2.23□□□□□ -2.05
Trim28Q62318 Gm25680-201ENSMUST00000116917 126 ntBASIC2.23□□□□□ -2.05
Trim28Q62318 Gm22635-201ENSMUST00000116962 126 ntBASIC2.23□□□□□ -2.05
Trim28Q62318 Gm22332-201ENSMUST00000158072 126 ntBASIC2.23□□□□□ -2.05
Trim28Q62318 Gm44491-201ENSMUST00000196794 96 ntBASIC2.23□□□□□ -2.05
Trim28Q62318 AC122327.1-201ENSMUST00000220778 108 ntBASIC2.23□□□□□ -2.05
Trim28Q62318 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.23□□□□□ -2.05
Trim28Q62318 Mir374b-201ENSMUST00000102314 95 ntBASIC2.22□□□□□ -2.05
Trim28Q62318 Gm26076-201ENSMUST00000104065 105 ntBASIC2.22□□□□□ -2.05
Trim28Q62318 Gm24171-201ENSMUST00000104126 131 ntBASIC2.22□□□□□ -2.05
Trim28Q62318 Gm22279-201ENSMUST00000157200 93 ntBASIC2.22□□□□□ -2.05
Trim28Q62318 Gm22556-201ENSMUST00000157803 100 ntBASIC2.22□□□□□ -2.05
Trim28Q62318 Snord43-201ENSMUST00000199549 108 ntBASIC2.22□□□□□ -2.05
Trim28Q62318 AC166341.8-201ENSMUST00000221267 108 ntBASIC2.22□□□□□ -2.05
Trim28Q62318 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.22□□□□□ -2.05
Trim28Q62318 Gm25627-201ENSMUST00000084003 153 ntBASIC2.22□□□□□ -2.05
Trim28Q62318 Gm24907-201ENSMUST00000116932 128 ntBASIC2.21□□□□□ -2.06
Trim28Q62318 Gm23788-201ENSMUST00000122535 106 ntBASIC2.21□□□□□ -2.06
Trim28Q62318 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.21□□□□□ -2.06
Trim28Q62318 Gm24250-201ENSMUST00000157320 135 ntBASIC2.21□□□□□ -2.06
Trim28Q62318 Gm25382-201ENSMUST00000157811 97 ntBASIC2.21□□□□□ -2.06
Trim28Q62318 Gm25978-201ENSMUST00000158698 90 ntBASIC2.21□□□□□ -2.06
Trim28Q62318 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.21□□□□□ -2.06
Trim28Q62318 Gm23770-201ENSMUST00000178009 108 ntBASIC2.21□□□□□ -2.06
Trim28Q62318 Gm22832-201ENSMUST00000178022 108 ntBASIC2.21□□□□□ -2.06
Trim28Q62318 Gm23863-201ENSMUST00000178265 108 ntBASIC2.21□□□□□ -2.06
Trim28Q62318 Gm24828-201ENSMUST00000178507 108 ntBASIC2.21□□□□□ -2.06
Trim28Q62318 Gm23052-201ENSMUST00000178633 108 ntBASIC2.21□□□□□ -2.06
Trim28Q62318 Gm25729-201ENSMUST00000179050 108 ntBASIC2.21□□□□□ -2.06
Trim28Q62318 Gm25359-201ENSMUST00000179315 108 ntBASIC2.21□□□□□ -2.06
Trim28Q62318 Gm22624-201ENSMUST00000179913 108 ntBASIC2.21□□□□□ -2.06
Trim28Q62318 Mir6379-201ENSMUST00000183392 115 ntBASIC2.21□□□□□ -2.06
Trim28Q62318 Gm25887-201ENSMUST00000157777 84 ntBASIC2.2□□□□□ -2.06
Trim28Q62318 Gm24076-201ENSMUST00000158179 94 ntBASIC2.2□□□□□ -2.06
Trim28Q62318 Gm23384-201ENSMUST00000158593 103 ntBASIC2.2□□□□□ -2.06
Trim28Q62318 Gm27722-201ENSMUST00000183908 76 ntBASIC2.2□□□□□ -2.06
Trim28Q62318 Mir3087-201ENSMUST00000199405 56 ntBASIC2.2□□□□□ -2.06
Trim28Q62318 Snora33-201ENSMUST00000093556 129 ntBASIC2.2□□□□□ -2.06
Trim28Q62318 Gm25878-201ENSMUST00000104327 93 ntBASIC2.19□□□□□ -2.06
Trim28Q62318 Gm23898-201ENSMUST00000158111 103 ntBASIC2.19□□□□□ -2.06
Trim28Q62318 Rnu7-201ENSMUST00000158458 62 ntBASIC2.19□□□□□ -2.06
Trim28Q62318 Mir3086-201ENSMUST00000175072 87 ntBASIC2.19□□□□□ -2.06
Trim28Q62318 Gm23813-201ENSMUST00000175153 77 ntBASIC2.19□□□□□ -2.06
Trim28Q62318 Gm21885-201ENSMUST00000178891 327 ntBASIC2.19□□□□□ -2.06
Trim28Q62318 Gm27446-201ENSMUST00000183963 89 ntBASIC2.19□□□□□ -2.06
Trim28Q62318 Gm44325-201ENSMUST00000196757 77 ntBASIC2.19□□□□□ -2.06
Trim28Q62318 Gm44408-201ENSMUST00000200205 66 ntBASIC2.19□□□□□ -2.06
Trim28Q62318 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.19□□□□□ -2.06
Trim28Q62318 Gm14671-201ENSMUST00000121790 262 ntBASIC2.18□□□□□ -2.06
Trim28Q62318 Gm25769-201ENSMUST00000158569 127 ntBASIC2.18□□□□□ -2.06
Trim28Q62318 Mir3961-201ENSMUST00000198795 59 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 141.4 ms