Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm22469-201ENSMUST00000104118 133 ntBASIC1.67□□□□□ -2.14
CtcfQ61164 Gm24171-201ENSMUST00000104126 131 ntBASIC1.67□□□□□ -2.14
CtcfQ61164 Gm26091-201ENSMUST00000122704 82 ntBASIC1.67□□□□□ -2.14
CtcfQ61164 Mir7665-201ENSMUST00000184907 63 ntBASIC1.67□□□□□ -2.14
CtcfQ61164 Snord14a-201ENSMUST00000082807 87 ntBASIC1.67□□□□□ -2.14
CtcfQ61164 Gm24038-201ENSMUST00000082872 159 ntBASIC1.67□□□□□ -2.14
CtcfQ61164 Mir320-201ENSMUST00000083594 82 ntBASIC1.67□□□□□ -2.14
CtcfQ61164 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.67□□□□□ -2.14
CtcfQ61164 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.67□□□□□ -2.14
CtcfQ61164 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
CtcfQ61164 Gm26415-201ENSMUST00000157673 292 ntBASIC1.66□□□□□ -2.14
CtcfQ61164 Gm22929-201ENSMUST00000175517 107 ntBASIC1.66□□□□□ -2.14
CtcfQ61164 Mir669j-201ENSMUST00000179023 121 ntBASIC1.66□□□□□ -2.14
CtcfQ61164 Gm27894-201ENSMUST00000184177 92 ntBASIC1.66□□□□□ -2.14
CtcfQ61164 Gm19855-201ENSMUST00000210145 249 ntBASIC1.66□□□□□ -2.14
CtcfQ61164 Gm16976-205ENSMUST00000227324 226 ntBASIC1.66□□□□□ -2.14
CtcfQ61164 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.66□□□□□ -2.14
CtcfQ61164 Gm25409-201ENSMUST00000083764 131 ntBASIC1.66□□□□□ -2.14
CtcfQ61164 Gm24445-201ENSMUST00000083981 107 ntBASIC1.66□□□□□ -2.14
CtcfQ61164 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.65□□□□□ -2.14
CtcfQ61164 Mir653-201ENSMUST00000102402 85 ntBASIC1.65□□□□□ -2.15
CtcfQ61164 Gm23434-201ENSMUST00000157179 100 ntBASIC1.65□□□□□ -2.15
CtcfQ61164 Gm26084-201ENSMUST00000157903 104 ntBASIC1.65□□□□□ -2.15
CtcfQ61164 Gm23859-201ENSMUST00000158383 64 ntBASIC1.65□□□□□ -2.15
CtcfQ61164 Gm27265-201ENSMUST00000183559 77 ntBASIC1.65□□□□□ -2.15
CtcfQ61164 Mir7052-201ENSMUST00000184821 65 ntBASIC1.65□□□□□ -2.15
CtcfQ61164 Gm27656-201ENSMUST00000185055 80 ntBASIC1.65□□□□□ -2.15
CtcfQ61164 Gm42506-201ENSMUST00000202009 150 ntBASIC1.65□□□□□ -2.15
CtcfQ61164 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.65□□□□□ -2.15
CtcfQ61164 Mir34a-201ENSMUST00000083559 102 ntBASIC1.65□□□□□ -2.15
CtcfQ61164 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.65□□□□□ -2.15
CtcfQ61164 Snord64-201ENSMUST00000104003 67 ntBASIC1.64□□□□□ -2.15
CtcfQ61164 Gm44489-201ENSMUST00000104619 97 ntBASIC1.64□□□□□ -2.15
CtcfQ61164 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.64□□□□□ -2.15
CtcfQ61164 Gm23170-201ENSMUST00000157158 106 ntBASIC1.64□□□□□ -2.15
CtcfQ61164 Gm24926-201ENSMUST00000178053 79 ntBASIC1.64□□□□□ -2.15
CtcfQ61164 Gm22632-201ENSMUST00000178266 79 ntBASIC1.64□□□□□ -2.15
CtcfQ61164 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CtcfQ61164 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.64□□□□□ -2.15
CtcfQ61164 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CtcfQ61164 mt-Tt-201ENSMUST00000082422 67 ntBASIC1.64□□□□□ -2.15
CtcfQ61164 Gm25697-201ENSMUST00000082902 98 ntBASIC1.64□□□□□ -2.15
CtcfQ61164 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.63□□□□□ -2.15
CtcfQ61164 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CtcfQ61164 Gm25878-201ENSMUST00000104327 93 ntBASIC1.63□□□□□ -2.15
CtcfQ61164 Gm14568-201ENSMUST00000119321 294 ntBASIC1.63□□□□□ -2.15
CtcfQ61164 Gm25771-201ENSMUST00000158565 144 ntBASIC1.63□□□□□ -2.15
CtcfQ61164 Gm24366-201ENSMUST00000175383 86 ntBASIC1.63□□□□□ -2.15
CtcfQ61164 Gm25936-201ENSMUST00000179952 114 ntBASIC1.63□□□□□ -2.15
CtcfQ61164 Mir6962-201ENSMUST00000199512 63 ntBASIC1.63□□□□□ -2.15
CtcfQ61164 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.63□□□□□ -2.15
CtcfQ61164 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.63□□□□□ -2.15
CtcfQ61164 Gm22576-201ENSMUST00000083733 104 ntBASIC1.63□□□□□ -2.15
CtcfQ61164 Gm24030-201ENSMUST00000083931 164 ntBASIC1.63□□□□□ -2.15
CtcfQ61164 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CtcfQ61164 Gm25992-201ENSMUST00000102437 109 ntBASIC1.62□□□□□ -2.15
CtcfQ61164 Gm26420-201ENSMUST00000104273 103 ntBASIC1.62□□□□□ -2.15
CtcfQ61164 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC1.62□□□□□ -2.15
CtcfQ61164 Gm25541-201ENSMUST00000116888 126 ntBASIC1.62□□□□□ -2.15
CtcfQ61164 Gm23419-201ENSMUST00000175523 84 ntBASIC1.62□□□□□ -2.15
CtcfQ61164 Mir7059-201ENSMUST00000184825 59 ntBASIC1.62□□□□□ -2.15
CtcfQ61164 Gm42855-201ENSMUST00000197388 253 ntBASIC1.62□□□□□ -2.15
CtcfQ61164 Gm26326-201ENSMUST00000083070 129 ntBASIC1.62□□□□□ -2.15
CtcfQ61164 Mir148b-201ENSMUST00000083626 97 ntBASIC1.62□□□□□ -2.15
CtcfQ61164 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.61□□□□□ -2.15
CtcfQ61164 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.61□□□□□ -2.15
CtcfQ61164 AC147101.2-201ENSMUST00000219756 184 ntBASIC1.61□□□□□ -2.15
CtcfQ61164 Gm24624-201ENSMUST00000082617 164 ntBASIC1.61□□□□□ -2.15
CtcfQ61164 Gm23509-201ENSMUST00000083080 160 ntBASIC1.61□□□□□ -2.15
CtcfQ61164 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
CtcfQ61164 Gm26301-201ENSMUST00000104813 95 ntBASIC1.6□□□□□ -2.15
CtcfQ61164 Gm14671-201ENSMUST00000121790 262 ntBASIC1.6□□□□□ -2.15
CtcfQ61164 Gm25623-201ENSMUST00000157216 108 ntBASIC1.6□□□□□ -2.15
CtcfQ61164 Gm26029-201ENSMUST00000158659 132 ntBASIC1.6□□□□□ -2.15
CtcfQ61164 Gm24345-201ENSMUST00000158706 124 ntBASIC1.6□□□□□ -2.15
CtcfQ61164 Gm23340-201ENSMUST00000158955 123 ntBASIC1.6□□□□□ -2.15
CtcfQ61164 Gm28794-201ENSMUST00000185276 136 ntBASIC1.6□□□□□ -2.15
CtcfQ61164 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.6□□□□□ -2.15
CtcfQ61164 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.6□□□□□ -2.15
CtcfQ61164 Gm22283-201ENSMUST00000082556 161 ntBASIC1.6□□□□□ -2.15
CtcfQ61164 Mir221-201ENSMUST00000083488 95 ntBASIC1.6□□□□□ -2.15
CtcfQ61164 Mir490-201ENSMUST00000093567 84 ntBASIC1.6□□□□□ -2.15
CtcfQ61164 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.6□□□□□ -2.15
CtcfQ61164 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.6□□□□□ -2.15
CtcfQ61164 Gm25089-201ENSMUST00000102015 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm25759-201ENSMUST00000103988 129 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm25840-201ENSMUST00000177821 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm24952-201ENSMUST00000177909 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm23682-201ENSMUST00000178146 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm24652-201ENSMUST00000178223 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm22629-201ENSMUST00000178272 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm24021-201ENSMUST00000178435 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm22274-201ENSMUST00000178441 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm22050-201ENSMUST00000178442 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm23688-201ENSMUST00000178502 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm23944-201ENSMUST00000178607 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm26283-201ENSMUST00000178625 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm25452-201ENSMUST00000178776 79 ntBASIC1.59□□□□□ -2.15
CtcfQ61164 Gm23286-201ENSMUST00000178963 79 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 137.1 ms