Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm25241-201ENSMUST00000174909 84 ntBASIC0.47□□□□□ -2.33
Trav6-2Q5R1I4 Gm26217-201ENSMUST00000175212 84 ntBASIC0.47□□□□□ -2.33
Trav6-2Q5R1I4 Gm25464-201ENSMUST00000175481 107 ntBASIC0.47□□□□□ -2.33
Trav6-2Q5R1I4 Gm44989-201ENSMUST00000204749 217 ntBASIC0.47□□□□□ -2.33
Trav6-2Q5R1I4 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.47□□□□□ -2.33
Trav6-2Q5R1I4 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.47□□□□□ -2.33
Trav6-2Q5R1I4 Gm22744-201ENSMUST00000083444 65 ntBASIC0.47□□□□□ -2.33
Trav6-2Q5R1I4 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Trav6-2Q5R1I4 Gm22796-201ENSMUST00000157234 106 ntBASIC0.46□□□□□ -2.34
Trav6-2Q5R1I4 Gm25267-201ENSMUST00000158522 63 ntBASIC0.46□□□□□ -2.34
Trav6-2Q5R1I4 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.46□□□□□ -2.34
Trav6-2Q5R1I4 Gm27289-201ENSMUST00000183341 82 ntBASIC0.46□□□□□ -2.34
Trav6-2Q5R1I4 Gm27672-201ENSMUST00000183751 204 ntBASIC0.46□□□□□ -2.34
Trav6-2Q5R1I4 Mir6377-201ENSMUST00000183760 114 ntBASIC0.46□□□□□ -2.34
Trav6-2Q5R1I4 Gm36956-201ENSMUST00000193830 214 ntBASIC0.46□□□□□ -2.34
Trav6-2Q5R1I4 Gm44909-201ENSMUST00000208756 165 ntBASIC0.46□□□□□ -2.34
Trav6-2Q5R1I4 Gm24555-201ENSMUST00000104548 124 ntBASIC0.45□□□□□ -2.34
Trav6-2Q5R1I4 Gm24747-201ENSMUST00000157835 87 ntBASIC0.45□□□□□ -2.34
Trav6-2Q5R1I4 Gm25494-201ENSMUST00000158143 100 ntBASIC0.45□□□□□ -2.34
Trav6-2Q5R1I4 Gm24729-201ENSMUST00000158225 137 ntBASIC0.45□□□□□ -2.34
Trav6-2Q5R1I4 Gm38364-201ENSMUST00000191814 179 ntBASIC0.45□□□□□ -2.34
Trav6-2Q5R1I4 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.45□□□□□ -2.34
Trav6-2Q5R1I4 Gm25138-201ENSMUST00000083248 136 ntBASIC0.45□□□□□ -2.34
Trav6-2Q5R1I4 Gm25611-201ENSMUST00000104017 133 ntBASIC0.44□□□□□ -2.34
Trav6-2Q5R1I4 Snord69-201ENSMUST00000104024 80 ntBASIC0.44□□□□□ -2.34
Trav6-2Q5R1I4 Gm11936-201ENSMUST00000118323 160 ntBASIC0.44□□□□□ -2.34
Trav6-2Q5R1I4 Gm24509-201ENSMUST00000157086 101 ntBASIC0.44□□□□□ -2.34
Trav6-2Q5R1I4 Gm26279-201ENSMUST00000157095 102 ntBASIC0.44□□□□□ -2.34
Trav6-2Q5R1I4 Gm25358-201ENSMUST00000157189 101 ntBASIC0.44□□□□□ -2.34
Trav6-2Q5R1I4 Gm22790-201ENSMUST00000157229 129 ntBASIC0.44□□□□□ -2.34
Trav6-2Q5R1I4 Gm16307-201ENSMUST00000161269 210 ntBASIC0.44□□□□□ -2.34
Trav6-2Q5R1I4 Snora15-201ENSMUST00000177461 131 ntBASIC0.44□□□□□ -2.34
Trav6-2Q5R1I4 Gm24415-201ENSMUST00000180218 107 ntBASIC0.44□□□□□ -2.34
Trav6-2Q5R1I4 Gm8219-201ENSMUST00000218309 242 ntBASIC0.44□□□□□ -2.34
Trav6-2Q5R1I4 AL606472.1-201ENSMUST00000224628 275 ntBASIC0.44□□□□□ -2.34
Trav6-2Q5R1I4 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.44□□□□□ -2.34
Trav6-2Q5R1I4 DQ267101-201ENSMUST00000082562 73 ntBASIC0.44□□□□□ -2.34
Trav6-2Q5R1I4 Gm25378-201ENSMUST00000104333 129 ntBASIC0.43□□□□□ -2.34
Trav6-2Q5R1I4 Gm23203-201ENSMUST00000104374 107 ntBASIC0.43□□□□□ -2.34
Trav6-2Q5R1I4 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Trav6-2Q5R1I4 Gm24385-201ENSMUST00000122694 350 ntBASIC0.43□□□□□ -2.34
Trav6-2Q5R1I4 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.43□□□□□ -2.34
Trav6-2Q5R1I4 Gm24772-201ENSMUST00000158507 110 ntBASIC0.43□□□□□ -2.34
Trav6-2Q5R1I4 Gm22433-201ENSMUST00000158550 142 ntBASIC0.43□□□□□ -2.34
Trav6-2Q5R1I4 Gm25718-201ENSMUST00000158632 118 ntBASIC0.43□□□□□ -2.34
Trav6-2Q5R1I4 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.43□□□□□ -2.34
Trav6-2Q5R1I4 Gm16546-201ENSMUST00000159442 355 ntBASIC0.43□□□□□ -2.34
Trav6-2Q5R1I4 Gm25633-201ENSMUST00000178565 107 ntBASIC0.43□□□□□ -2.34
Trav6-2Q5R1I4 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.43□□□□□ -2.34
Trav6-2Q5R1I4 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.43□□□□□ -2.34
Trav6-2Q5R1I4 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
Trav6-2Q5R1I4 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Trav6-2Q5R1I4 Snord100-201ENSMUST00000116836 74 ntBASIC0.42□□□□□ -2.34
Trav6-2Q5R1I4 Gm6952-201ENSMUST00000118629 159 ntBASIC0.42□□□□□ -2.34
Trav6-2Q5R1I4 Gm24476-201ENSMUST00000157437 131 ntBASIC0.42□□□□□ -2.34
Trav6-2Q5R1I4 Gm25882-201ENSMUST00000157784 85 ntBASIC0.42□□□□□ -2.34
Trav6-2Q5R1I4 Gm25161-201ENSMUST00000158913 132 ntBASIC0.42□□□□□ -2.34
Trav6-2Q5R1I4 Gm25749-201ENSMUST00000175485 111 ntBASIC0.42□□□□□ -2.34
Trav6-2Q5R1I4 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.42□□□□□ -2.34
Trav6-2Q5R1I4 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.42□□□□□ -2.34
Trav6-2Q5R1I4 Mir101a-201ENSMUST00000083517 83 ntBASIC0.42□□□□□ -2.34
Trav6-2Q5R1I4 Mir216a-201ENSMUST00000083605 72 ntBASIC0.42□□□□□ -2.34
Trav6-2Q5R1I4 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
Trav6-2Q5R1I4 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.41□□□□□ -2.34
Trav6-2Q5R1I4 Gm25110-201ENSMUST00000116684 121 ntBASIC0.41□□□□□ -2.34
Trav6-2Q5R1I4 Gm25775-201ENSMUST00000116716 121 ntBASIC0.41□□□□□ -2.34
Trav6-2Q5R1I4 Gm24795-201ENSMUST00000116737 121 ntBASIC0.41□□□□□ -2.34
Trav6-2Q5R1I4 Gm25171-201ENSMUST00000116926 121 ntBASIC0.41□□□□□ -2.34
Trav6-2Q5R1I4 Gm14946-201ENSMUST00000119859 296 ntBASIC0.41□□□□□ -2.34
Trav6-2Q5R1I4 Gm6985-201ENSMUST00000121255 271 ntBASIC0.41□□□□□ -2.34
Trav6-2Q5R1I4 Gm24728-201ENSMUST00000158226 125 ntBASIC0.41□□□□□ -2.34
Trav6-2Q5R1I4 Gm23853-201ENSMUST00000158375 104 ntBASIC0.41□□□□□ -2.34
Trav6-2Q5R1I4 Gm24527-201ENSMUST00000082920 107 ntBASIC0.41□□□□□ -2.34
Trav6-2Q5R1I4 Mir466p-201ENSMUST00000103925 89 ntBASIC0.4□□□□□ -2.35
Trav6-2Q5R1I4 Gm14567-201ENSMUST00000117155 174 ntBASIC0.4□□□□□ -2.35
Trav6-2Q5R1I4 Gm6272-201ENSMUST00000121256 171 ntBASIC0.4□□□□□ -2.35
Trav6-2Q5R1I4 Gm25654-201ENSMUST00000158467 88 ntBASIC0.4□□□□□ -2.35
Trav6-2Q5R1I4 Gm44211-201ENSMUST00000204867 145 ntBASIC0.4□□□□□ -2.35
Trav6-2Q5R1I4 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC0.4□□□□□ -2.35
Trav6-2Q5R1I4 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.4□□□□□ -2.35
Trav6-2Q5R1I4 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.4□□□□□ -2.35
Trav6-2Q5R1I4 Gm8508-201ENSMUST00000061226 363 ntBASIC0.4□□□□□ -2.35
Trav6-2Q5R1I4 Gm23970-201ENSMUST00000083319 107 ntBASIC0.4□□□□□ -2.35
Trav6-2Q5R1I4 Gm26123-201ENSMUST00000083363 135 ntBASIC0.4□□□□□ -2.35
Trav6-2Q5R1I4 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.39□□□□□ -2.35
Trav6-2Q5R1I4 Gm25390-201ENSMUST00000157341 103 ntBASIC0.39□□□□□ -2.35
Trav6-2Q5R1I4 Gm23672-201ENSMUST00000157471 107 ntBASIC0.39□□□□□ -2.35
Trav6-2Q5R1I4 Gm22340-201ENSMUST00000157717 114 ntBASIC0.39□□□□□ -2.35
Trav6-2Q5R1I4 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.39□□□□□ -2.35
Trav6-2Q5R1I4 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.39□□□□□ -2.35
Trav6-2Q5R1I4 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
Trav6-2Q5R1I4 Gm26303-201ENSMUST00000116845 119 ntBASIC0.38□□□□□ -2.35
Trav6-2Q5R1I4 Gm14884-201ENSMUST00000120456 196 ntBASIC0.38□□□□□ -2.35
Trav6-2Q5R1I4 Gm25184-201ENSMUST00000157753 163 ntBASIC0.38□□□□□ -2.35
Trav6-2Q5R1I4 Gm26484-201ENSMUST00000158018 106 ntBASIC0.38□□□□□ -2.35
Trav6-2Q5R1I4 Gm23838-201ENSMUST00000158067 162 ntBASIC0.38□□□□□ -2.35
Trav6-2Q5R1I4 Gm25769-201ENSMUST00000158569 127 ntBASIC0.38□□□□□ -2.35
Trav6-2Q5R1I4 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
Trav6-2Q5R1I4 Gm25588-201ENSMUST00000082501 140 ntBASIC0.38□□□□□ -2.35
Trav6-2Q5R1I4 Gm22302-201ENSMUST00000082657 106 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 164 ms