Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm44959-201ENSMUST00000209127 231 ntBASIC-0.74□□□□□ -2.53
Trav5d-4Q5R1F6 AC125311.1-201ENSMUST00000226950 220 ntBASIC-0.74□□□□□ -2.53
Trav5d-4Q5R1F6 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-0.74□□□□□ -2.53
Trav5d-4Q5R1F6 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.74□□□□□ -2.53
Trav5d-4Q5R1F6 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.75□□□□□ -2.53
Trav5d-4Q5R1F6 Gm16356-201ENSMUST00000143300 169 ntBASIC-0.75□□□□□ -2.53
Trav5d-4Q5R1F6 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.75□□□□□ -2.53
Trav5d-4Q5R1F6 Mir327-201ENSMUST00000199328 69 ntBASIC-0.75□□□□□ -2.53
Trav5d-4Q5R1F6 Gm26111-201ENSMUST00000083969 106 ntBASIC-0.75□□□□□ -2.53
Trav5d-4Q5R1F6 Gm24275-201ENSMUST00000116780 146 ntBASIC-0.76□□□□□ -2.53
Trav5d-4Q5R1F6 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.76□□□□□ -2.53
Trav5d-4Q5R1F6 Gm24635-201ENSMUST00000122712 128 ntBASIC-0.76□□□□□ -2.53
Trav5d-4Q5R1F6 Gm23982-201ENSMUST00000157141 106 ntBASIC-0.76□□□□□ -2.53
Trav5d-4Q5R1F6 Gm22767-201ENSMUST00000158365 165 ntBASIC-0.76□□□□□ -2.53
Trav5d-4Q5R1F6 Gm28849-201ENSMUST00000188127 174 ntBASIC-0.76□□□□□ -2.53
Trav5d-4Q5R1F6 Gm28648-201ENSMUST00000190092 343 ntBASIC-0.76□□□□□ -2.53
Trav5d-4Q5R1F6 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.76□□□□□ -2.53
Trav5d-4Q5R1F6 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.76□□□□□ -2.53
Trav5d-4Q5R1F6 AC159619.2-201ENSMUST00000222924 401 ntBASIC-0.76□□□□□ -2.53
Trav5d-4Q5R1F6 Mir759-201ENSMUST00000103254 98 ntBASIC-0.77□□□□□ -2.53
Trav5d-4Q5R1F6 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.77□□□□□ -2.53
Trav5d-4Q5R1F6 Gm12647-201ENSMUST00000118977 265 ntBASIC-0.77□□□□□ -2.53
Trav5d-4Q5R1F6 Gm26393-201ENSMUST00000157625 129 ntBASIC-0.77□□□□□ -2.53
Trav5d-4Q5R1F6 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.77□□□□□ -2.53
Trav5d-4Q5R1F6 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.78□□□□□ -2.53
Trav5d-4Q5R1F6 Gm13720-201ENSMUST00000120741 196 ntBASIC-0.78□□□□□ -2.53
Trav5d-4Q5R1F6 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.78□□□□□ -2.53
Trav5d-4Q5R1F6 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.78□□□□□ -2.53
Trav5d-4Q5R1F6 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.79□□□□□ -2.54
Trav5d-4Q5R1F6 Gm22199-201ENSMUST00000122660 126 ntBASIC-0.79□□□□□ -2.54
Trav5d-4Q5R1F6 Gm22097-201ENSMUST00000157929 278 ntBASIC-0.79□□□□□ -2.54
Trav5d-4Q5R1F6 Gm24810-201ENSMUST00000175317 70 ntBASIC-0.79□□□□□ -2.54
Trav5d-4Q5R1F6 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.8□□□□□ -2.54
Trav5d-4Q5R1F6 Gm25323-201ENSMUST00000122555 103 ntBASIC-0.8□□□□□ -2.54
Trav5d-4Q5R1F6 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.8□□□□□ -2.54
Trav5d-4Q5R1F6 Gm24504-201ENSMUST00000157679 100 ntBASIC-0.8□□□□□ -2.54
Trav5d-4Q5R1F6 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.8□□□□□ -2.54
Trav5d-4Q5R1F6 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.8□□□□□ -2.54
Trav5d-4Q5R1F6 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.8□□□□□ -2.54
Trav5d-4Q5R1F6 Gm43238-201ENSMUST00000196463 359 ntBASIC-0.8□□□□□ -2.54
Trav5d-4Q5R1F6 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.8□□□□□ -2.54
Trav5d-4Q5R1F6 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC-0.8□□□□□ -2.54
Trav5d-4Q5R1F6 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.8□□□□□ -2.54
Trav5d-4Q5R1F6 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.8□□□□□ -2.54
Trav5d-4Q5R1F6 Gm7240-201ENSMUST00000220769 664 ntBASIC-0.8□□□□□ -2.54
Trav5d-4Q5R1F6 Gm24204-201ENSMUST00000082950 107 ntBASIC-0.8□□□□□ -2.54
Trav5d-4Q5R1F6 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-0.81□□□□□ -2.54
Trav5d-4Q5R1F6 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.81□□□□□ -2.54
Trav5d-4Q5R1F6 Gm25771-201ENSMUST00000158565 144 ntBASIC-0.81□□□□□ -2.54
Trav5d-4Q5R1F6 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.81□□□□□ -2.54
Trav5d-4Q5R1F6 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.81□□□□□ -2.54
Trav5d-4Q5R1F6 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC-0.81□□□□□ -2.54
Trav5d-4Q5R1F6 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.81□□□□□ -2.54
Trav5d-4Q5R1F6 Gm25007-201ENSMUST00000083808 133 ntBASIC-0.81□□□□□ -2.54
Trav5d-4Q5R1F6 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.82□□□□□ -2.54
Trav5d-4Q5R1F6 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-0.82□□□□□ -2.54
Trav5d-4Q5R1F6 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC-0.82□□□□□ -2.54
Trav5d-4Q5R1F6 Gm25828-201ENSMUST00000157087 95 ntBASIC-0.82□□□□□ -2.54
Trav5d-4Q5R1F6 Gm23640-201ENSMUST00000157860 104 ntBASIC-0.82□□□□□ -2.54
Trav5d-4Q5R1F6 Gm25615-201ENSMUST00000177836 94 ntBASIC-0.82□□□□□ -2.54
Trav5d-4Q5R1F6 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.82□□□□□ -2.54
Trav5d-4Q5R1F6 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.82□□□□□ -2.54
Trav5d-4Q5R1F6 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
Trav5d-4Q5R1F6 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.82□□□□□ -2.54
Trav5d-4Q5R1F6 Gm25102-201ENSMUST00000122479 112 ntBASIC-0.83□□□□□ -2.54
Trav5d-4Q5R1F6 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.83□□□□□ -2.54
Trav5d-4Q5R1F6 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.83□□□□□ -2.54
Trav5d-4Q5R1F6 Gm15030-201ENSMUST00000119804 484 ntBASIC-0.84□□□□□ -2.54
Trav5d-4Q5R1F6 Gm23262-201ENSMUST00000158323 168 ntBASIC-0.84□□□□□ -2.54
Trav5d-4Q5R1F6 AC159896.1-201ENSMUST00000215264 215 ntBASIC-0.84□□□□□ -2.54
Trav5d-4Q5R1F6 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.85□□□□□ -2.55
Trav5d-4Q5R1F6 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.85□□□□□ -2.55
Trav5d-4Q5R1F6 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.85□□□□□ -2.55
Trav5d-4Q5R1F6 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.85□□□□□ -2.55
Trav5d-4Q5R1F6 Gm26482-201ENSMUST00000158015 62 ntBASIC-0.85□□□□□ -2.55
Trav5d-4Q5R1F6 Gm22085-201ENSMUST00000158344 110 ntBASIC-0.85□□□□□ -2.55
Trav5d-4Q5R1F6 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.85□□□□□ -2.55
Trav5d-4Q5R1F6 Gm25142-201ENSMUST00000082698 107 ntBASIC-0.85□□□□□ -2.55
Trav5d-4Q5R1F6 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.85□□□□□ -2.55
Trav5d-4Q5R1F6 Gm11834-201ENSMUST00000122257 585 ntBASIC-0.86□□□□□ -2.55
Trav5d-4Q5R1F6 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.86□□□□□ -2.55
Trav5d-4Q5R1F6 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.86□□□□□ -2.55
Trav5d-4Q5R1F6 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.86□□□□□ -2.55
Trav5d-4Q5R1F6 Gm25929-201ENSMUST00000082784 107 ntBASIC-0.86□□□□□ -2.55
Trav5d-4Q5R1F6 Gm26056-201ENSMUST00000083043 104 ntBASIC-0.86□□□□□ -2.55
Trav5d-4Q5R1F6 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.87□□□□□ -2.55
Trav5d-4Q5R1F6 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.87□□□□□ -2.55
Trav5d-4Q5R1F6 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.87□□□□□ -2.55
Trav5d-4Q5R1F6 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.87□□□□□ -2.55
Trav5d-4Q5R1F6 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.87□□□□□ -2.55
Trav5d-4Q5R1F6 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.87□□□□□ -2.55
Trav5d-4Q5R1F6 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.87□□□□□ -2.55
Trav5d-4Q5R1F6 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.87□□□□□ -2.55
Trav5d-4Q5R1F6 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.87□□□□□ -2.55
Trav5d-4Q5R1F6 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.87□□□□□ -2.55
Trav5d-4Q5R1F6 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.87□□□□□ -2.55
Trav5d-4Q5R1F6 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC-0.87□□□□□ -2.55
Trav5d-4Q5R1F6 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.87□□□□□ -2.55
Trav5d-4Q5R1F6 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.88□□□□□ -2.55
Trav5d-4Q5R1F6 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.89□□□□□ -2.55
Retrieved 100 of 76,532 protein–RNA pairs in 545.6 ms