Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Usp28Q5I043 Gm22786-201ENSMUST00000104086 122 ntBASIC0.57□□□□□ -2.32
Usp28Q5I043 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Usp28Q5I043 Gm24729-201ENSMUST00000158225 137 ntBASIC0.57□□□□□ -2.32
Usp28Q5I043 Gm22258-201ENSMUST00000177645 94 ntBASIC0.57□□□□□ -2.32
Usp28Q5I043 Gm26032-201ENSMUST00000178535 94 ntBASIC0.57□□□□□ -2.32
Usp28Q5I043 Gm25210-201ENSMUST00000178813 94 ntBASIC0.57□□□□□ -2.32
Usp28Q5I043 Gm25157-201ENSMUST00000178914 94 ntBASIC0.57□□□□□ -2.32
Usp28Q5I043 Gm22046-201ENSMUST00000179027 94 ntBASIC0.57□□□□□ -2.32
Usp28Q5I043 Gm22941-201ENSMUST00000179630 94 ntBASIC0.57□□□□□ -2.32
Usp28Q5I043 Gm25471-201ENSMUST00000180126 94 ntBASIC0.57□□□□□ -2.32
Usp28Q5I043 Gm24415-201ENSMUST00000180218 107 ntBASIC0.57□□□□□ -2.32
Usp28Q5I043 Mir6394-201ENSMUST00000184738 99 ntBASIC0.57□□□□□ -2.32
Usp28Q5I043 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.57□□□□□ -2.32
Usp28Q5I043 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.57□□□□□ -2.32
Usp28Q5I043 Mir186-201ENSMUST00000083497 71 ntBASIC0.57□□□□□ -2.32
Usp28Q5I043 Snord33-201ENSMUST00000083694 84 ntBASIC0.57□□□□□ -2.32
Usp28Q5I043 Mir362-201ENSMUST00000093592 65 ntBASIC0.57□□□□□ -2.32
Usp28Q5I043 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.56□□□□□ -2.32
Usp28Q5I043 Gm22482-201ENSMUST00000122563 359 ntBASIC0.56□□□□□ -2.32
Usp28Q5I043 Gm22790-201ENSMUST00000157229 129 ntBASIC0.56□□□□□ -2.32
Usp28Q5I043 Gm25901-201ENSMUST00000158494 130 ntBASIC0.56□□□□□ -2.32
Usp28Q5I043 Gm23567-201ENSMUST00000178005 107 ntBASIC0.56□□□□□ -2.32
Usp28Q5I043 Mir7039-201ENSMUST00000183852 85 ntBASIC0.56□□□□□ -2.32
Usp28Q5I043 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.56□□□□□ -2.32
Usp28Q5I043 Gm24920-201ENSMUST00000083018 85 ntBASIC0.56□□□□□ -2.32
Usp28Q5I043 Mir500-201ENSMUST00000093600 92 ntBASIC0.56□□□□□ -2.32
Usp28Q5I043 Gm25110-201ENSMUST00000116684 121 ntBASIC0.55□□□□□ -2.32
Usp28Q5I043 Gm25775-201ENSMUST00000116716 121 ntBASIC0.55□□□□□ -2.32
Usp28Q5I043 Gm24795-201ENSMUST00000116737 121 ntBASIC0.55□□□□□ -2.32
Usp28Q5I043 Gm25171-201ENSMUST00000116926 121 ntBASIC0.55□□□□□ -2.32
Usp28Q5I043 Gm23605-201ENSMUST00000157255 127 ntBASIC0.55□□□□□ -2.32
Usp28Q5I043 Gm25882-201ENSMUST00000157784 85 ntBASIC0.55□□□□□ -2.32
Usp28Q5I043 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.55□□□□□ -2.32
Usp28Q5I043 Gm25241-201ENSMUST00000174909 84 ntBASIC0.55□□□□□ -2.32
Usp28Q5I043 Gm26217-201ENSMUST00000175212 84 ntBASIC0.55□□□□□ -2.32
Usp28Q5I043 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.55□□□□□ -2.32
Usp28Q5I043 Snord82-201ENSMUST00000082889 70 ntBASIC0.55□□□□□ -2.32
Usp28Q5I043 Gm24522-201ENSMUST00000083964 108 ntBASIC0.55□□□□□ -2.32
Usp28Q5I043 Gm24509-201ENSMUST00000157086 101 ntBASIC0.54□□□□□ -2.32
Usp28Q5I043 Gm25358-201ENSMUST00000157189 101 ntBASIC0.54□□□□□ -2.32
Usp28Q5I043 Gm24678-201ENSMUST00000158756 104 ntBASIC0.54□□□□□ -2.32
Usp28Q5I043 Gm25834-201ENSMUST00000158916 101 ntBASIC0.54□□□□□ -2.32
Usp28Q5I043 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.54□□□□□ -2.32
Usp28Q5I043 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Usp28Q5I043 Mir6985-201ENSMUST00000184641 61 ntBASIC0.54□□□□□ -2.32
Usp28Q5I043 AC161426.1-201ENSMUST00000214137 286 ntBASIC0.54□□□□□ -2.32
Usp28Q5I043 Gm25588-201ENSMUST00000082501 140 ntBASIC0.54□□□□□ -2.32
Usp28Q5I043 Gm26123-201ENSMUST00000083363 135 ntBASIC0.54□□□□□ -2.32
Usp28Q5I043 Mir466b-8-201ENSMUST00000103883 86 ntBASIC0.53□□□□□ -2.32
Usp28Q5I043 Gm23203-201ENSMUST00000104374 107 ntBASIC0.53□□□□□ -2.32
Usp28Q5I043 Gm23991-201ENSMUST00000117033 93 ntBASIC0.53□□□□□ -2.32
Usp28Q5I043 Gm24385-201ENSMUST00000122694 350 ntBASIC0.53□□□□□ -2.32
Usp28Q5I043 Mir1933-201ENSMUST00000158930 88 ntBASIC0.53□□□□□ -2.32
Usp28Q5I043 Gm36956-201ENSMUST00000193830 214 ntBASIC0.53□□□□□ -2.32
Usp28Q5I043 Mir466e-201ENSMUST00000198862 84 ntBASIC0.53□□□□□ -2.32
Usp28Q5I043 Mir466c-1-201ENSMUST00000200654 84 ntBASIC0.53□□□□□ -2.32
Usp28Q5I043 Gm25138-201ENSMUST00000083248 136 ntBASIC0.53□□□□□ -2.32
Usp28Q5I043 Gm22738-201ENSMUST00000083440 147 ntBASIC0.53□□□□□ -2.32
Usp28Q5I043 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.52□□□□□ -2.33
Usp28Q5I043 Gm24276-201ENSMUST00000102181 110 ntBASIC0.52□□□□□ -2.33
Usp28Q5I043 Gm22850-201ENSMUST00000157714 82 ntBASIC0.52□□□□□ -2.33
Usp28Q5I043 Gm23258-201ENSMUST00000158319 106 ntBASIC0.52□□□□□ -2.33
Usp28Q5I043 Gm24323-201ENSMUST00000175342 77 ntBASIC0.52□□□□□ -2.33
Usp28Q5I043 Mir6364-201ENSMUST00000183396 86 ntBASIC0.52□□□□□ -2.33
Usp28Q5I043 Gm44458-201ENSMUST00000196594 143 ntBASIC0.52□□□□□ -2.33
Usp28Q5I043 Gm44488-201ENSMUST00000199467 119 ntBASIC0.52□□□□□ -2.33
Usp28Q5I043 Mir101a-201ENSMUST00000083517 83 ntBASIC0.52□□□□□ -2.33
Usp28Q5I043 Mir344-201ENSMUST00000083634 95 ntBASIC0.52□□□□□ -2.33
Usp28Q5I043 Mir532-201ENSMUST00000093630 96 ntBASIC0.52□□□□□ -2.33
Usp28Q5I043 Gm26274-201ENSMUST00000157103 321 ntBASIC0.51□□□□□ -2.33
Usp28Q5I043 Gm24250-201ENSMUST00000157320 135 ntBASIC0.51□□□□□ -2.33
Usp28Q5I043 Gm22946-201ENSMUST00000158558 82 ntBASIC0.51□□□□□ -2.33
Usp28Q5I043 Gm23770-201ENSMUST00000178009 108 ntBASIC0.51□□□□□ -2.33
Usp28Q5I043 Gm22832-201ENSMUST00000178022 108 ntBASIC0.51□□□□□ -2.33
Usp28Q5I043 Gm23863-201ENSMUST00000178265 108 ntBASIC0.51□□□□□ -2.33
Usp28Q5I043 Gm24828-201ENSMUST00000178507 108 ntBASIC0.51□□□□□ -2.33
Usp28Q5I043 Gm23052-201ENSMUST00000178633 108 ntBASIC0.51□□□□□ -2.33
Usp28Q5I043 Gm25729-201ENSMUST00000179050 108 ntBASIC0.51□□□□□ -2.33
Usp28Q5I043 Gm25359-201ENSMUST00000179315 108 ntBASIC0.51□□□□□ -2.33
Usp28Q5I043 Gm22624-201ENSMUST00000179913 108 ntBASIC0.51□□□□□ -2.33
Usp28Q5I043 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.51□□□□□ -2.33
Usp28Q5I043 Gm24132-201ENSMUST00000104745 91 ntBASIC0.5□□□□□ -2.33
Usp28Q5I043 Gm25315-201ENSMUST00000116823 121 ntBASIC0.5□□□□□ -2.33
Usp28Q5I043 Gm11248-201ENSMUST00000119568 201 ntBASIC0.5□□□□□ -2.33
Usp28Q5I043 Gm22999-201ENSMUST00000157082 88 ntBASIC0.5□□□□□ -2.33
Usp28Q5I043 Gm22796-201ENSMUST00000157234 106 ntBASIC0.5□□□□□ -2.33
Usp28Q5I043 Gm23838-201ENSMUST00000158067 162 ntBASIC0.5□□□□□ -2.33
Usp28Q5I043 Gm24500-201ENSMUST00000158447 124 ntBASIC0.5□□□□□ -2.33
Usp28Q5I043 Gm27289-201ENSMUST00000183341 82 ntBASIC0.5□□□□□ -2.33
Usp28Q5I043 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.5□□□□□ -2.33
Usp28Q5I043 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.5□□□□□ -2.33
Usp28Q5I043 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.5□□□□□ -2.33
Usp28Q5I043 Gm25482-201ENSMUST00000083225 107 ntBASIC0.5□□□□□ -2.33
Usp28Q5I043 Gm22576-201ENSMUST00000083733 104 ntBASIC0.5□□□□□ -2.33
Usp28Q5I043 Gm25611-201ENSMUST00000104017 133 ntBASIC0.49□□□□□ -2.33
Usp28Q5I043 Gm25378-201ENSMUST00000104333 129 ntBASIC0.49□□□□□ -2.33
Usp28Q5I043 Gm23772-201ENSMUST00000104433 102 ntBASIC0.49□□□□□ -2.33
Usp28Q5I043 Mir1898-201ENSMUST00000122643 83 ntBASIC0.49□□□□□ -2.33
Usp28Q5I043 Gm23901-201ENSMUST00000157570 107 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 178.8 ms