Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Mir547-201ENSMUST00000102051 78 ntBASIC1.09□□□□□ -2.23
Ckap2Q3V1H1 Gm25599-201ENSMUST00000157816 103 ntBASIC1.09□□□□□ -2.23
Ckap2Q3V1H1 Gm22074-201ENSMUST00000158595 113 ntBASIC1.09□□□□□ -2.23
Ckap2Q3V1H1 Gm23375-201ENSMUST00000175407 83 ntBASIC1.09□□□□□ -2.23
Ckap2Q3V1H1 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Ckap2Q3V1H1 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.09□□□□□ -2.23
Ckap2Q3V1H1 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Ckap2Q3V1H1 Mir196b-201ENSMUST00000083509 85 ntBASIC1.09□□□□□ -2.23
Ckap2Q3V1H1 Gm23760-201ENSMUST00000158350 116 ntBASIC1.08□□□□□ -2.24
Ckap2Q3V1H1 Gm27934-201ENSMUST00000158795 63 ntBASIC1.08□□□□□ -2.24
Ckap2Q3V1H1 Gm22129-201ENSMUST00000179034 107 ntBASIC1.08□□□□□ -2.24
Ckap2Q3V1H1 Gm43898-201ENSMUST00000204456 424 ntBASIC1.08□□□□□ -2.24
Ckap2Q3V1H1 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.08□□□□□ -2.24
Ckap2Q3V1H1 Gm22576-201ENSMUST00000083733 104 ntBASIC1.08□□□□□ -2.24
Ckap2Q3V1H1 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.08□□□□□ -2.24
Ckap2Q3V1H1 Gm23990-201ENSMUST00000117031 117 ntBASIC1.07□□□□□ -2.24
Ckap2Q3V1H1 Gm22999-201ENSMUST00000157082 88 ntBASIC1.07□□□□□ -2.24
Ckap2Q3V1H1 Gm23329-201ENSMUST00000157415 108 ntBASIC1.07□□□□□ -2.24
Ckap2Q3V1H1 Gm25011-201ENSMUST00000158398 126 ntBASIC1.07□□□□□ -2.24
Ckap2Q3V1H1 Gm25769-201ENSMUST00000158569 127 ntBASIC1.07□□□□□ -2.24
Ckap2Q3V1H1 Gm7258-201ENSMUST00000179317 300 ntBASIC1.07□□□□□ -2.24
Ckap2Q3V1H1 Mir468-201ENSMUST00000197332 78 ntBASIC1.07□□□□□ -2.24
Ckap2Q3V1H1 Gm44976-201ENSMUST00000205543 261 ntBASIC1.07□□□□□ -2.24
Ckap2Q3V1H1 Gm22809-201ENSMUST00000082743 156 ntBASIC1.07□□□□□ -2.24
Ckap2Q3V1H1 Gm25851-201ENSMUST00000082794 107 ntBASIC1.07□□□□□ -2.24
Ckap2Q3V1H1 Gm26420-201ENSMUST00000104273 103 ntBASIC1.06□□□□□ -2.24
Ckap2Q3V1H1 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.06□□□□□ -2.24
Ckap2Q3V1H1 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.06□□□□□ -2.24
Ckap2Q3V1H1 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Ckap2Q3V1H1 Gm24250-201ENSMUST00000157320 135 ntBASIC1.05□□□□□ -2.24
Ckap2Q3V1H1 Gm25715-201ENSMUST00000158627 125 ntBASIC1.05□□□□□ -2.24
Ckap2Q3V1H1 Gm23770-201ENSMUST00000178009 108 ntBASIC1.05□□□□□ -2.24
Ckap2Q3V1H1 Gm22832-201ENSMUST00000178022 108 ntBASIC1.05□□□□□ -2.24
Ckap2Q3V1H1 Gm23863-201ENSMUST00000178265 108 ntBASIC1.05□□□□□ -2.24
Ckap2Q3V1H1 Gm24828-201ENSMUST00000178507 108 ntBASIC1.05□□□□□ -2.24
Ckap2Q3V1H1 Gm23052-201ENSMUST00000178633 108 ntBASIC1.05□□□□□ -2.24
Ckap2Q3V1H1 Gm25729-201ENSMUST00000179050 108 ntBASIC1.05□□□□□ -2.24
Ckap2Q3V1H1 Gm25359-201ENSMUST00000179315 108 ntBASIC1.05□□□□□ -2.24
Ckap2Q3V1H1 Gm22624-201ENSMUST00000179913 108 ntBASIC1.05□□□□□ -2.24
Ckap2Q3V1H1 Gm44462-201ENSMUST00000199696 129 ntBASIC1.05□□□□□ -2.24
Ckap2Q3V1H1 Gm44948-201ENSMUST00000209050 149 ntBASIC1.05□□□□□ -2.24
Ckap2Q3V1H1 Snora41-201ENSMUST00000082668 132 ntBASIC1.05□□□□□ -2.24
Ckap2Q3V1H1 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Ckap2Q3V1H1 Gm23130-201ENSMUST00000104252 74 ntBASIC1.04□□□□□ -2.24
Ckap2Q3V1H1 Gm22425-201ENSMUST00000158532 138 ntBASIC1.04□□□□□ -2.24
Ckap2Q3V1H1 Gm25716-201ENSMUST00000158628 104 ntBASIC1.04□□□□□ -2.24
Ckap2Q3V1H1 Gm16307-201ENSMUST00000161269 210 ntBASIC1.04□□□□□ -2.24
Ckap2Q3V1H1 Gm25241-201ENSMUST00000174909 84 ntBASIC1.04□□□□□ -2.24
Ckap2Q3V1H1 Gm26217-201ENSMUST00000175212 84 ntBASIC1.04□□□□□ -2.24
Ckap2Q3V1H1 Gm24106-201ENSMUST00000175498 127 ntBASIC1.04□□□□□ -2.24
Ckap2Q3V1H1 Mir6481-201ENSMUST00000184617 110 ntBASIC1.04□□□□□ -2.24
Ckap2Q3V1H1 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.04□□□□□ -2.24
Ckap2Q3V1H1 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.04□□□□□ -2.24
Ckap2Q3V1H1 Gm25128-201ENSMUST00000083339 76 ntBASIC1.04□□□□□ -2.24
Ckap2Q3V1H1 Gm26123-201ENSMUST00000083363 135 ntBASIC1.04□□□□□ -2.24
Ckap2Q3V1H1 Mir489-201ENSMUST00000093599 107 ntBASIC1.04□□□□□ -2.24
Ckap2Q3V1H1 Gm24232-201ENSMUST00000104314 132 ntBASIC1.03□□□□□ -2.24
Ckap2Q3V1H1 Gm22967-201ENSMUST00000157956 239 ntBASIC1.03□□□□□ -2.24
Ckap2Q3V1H1 Gm22139-201ENSMUST00000158747 105 ntBASIC1.03□□□□□ -2.24
Ckap2Q3V1H1 Mir7059-201ENSMUST00000184825 59 ntBASIC1.03□□□□□ -2.24
Ckap2Q3V1H1 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.03□□□□□ -2.24
Ckap2Q3V1H1 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.03□□□□□ -2.24
Ckap2Q3V1H1 Gm25683-201ENSMUST00000083940 131 ntBASIC1.03□□□□□ -2.24
Ckap2Q3V1H1 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Ckap2Q3V1H1 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Ckap2Q3V1H1 Gm22079-201ENSMUST00000157592 106 ntBASIC1.02□□□□□ -2.25
Ckap2Q3V1H1 Mir1961-201ENSMUST00000158643 112 ntBASIC1.02□□□□□ -2.25
Ckap2Q3V1H1 Gm24221-201ENSMUST00000158833 313 ntBASIC1.02□□□□□ -2.25
Ckap2Q3V1H1 Gm17020-201ENSMUST00000172274 274 ntBASIC1.02□□□□□ -2.25
Ckap2Q3V1H1 Gm22699-201ENSMUST00000175376 105 ntBASIC1.02□□□□□ -2.25
Ckap2Q3V1H1 Gm23714-201ENSMUST00000179259 105 ntBASIC1.02□□□□□ -2.25
Ckap2Q3V1H1 Mir7663-201ENSMUST00000183950 61 ntBASIC1.02□□□□□ -2.25
Ckap2Q3V1H1 Gm43381-201ENSMUST00000198553 165 ntBASIC1.02□□□□□ -2.25
Ckap2Q3V1H1 Gm23766-201ENSMUST00000103894 80 ntBASIC1.01□□□□□ -2.25
Ckap2Q3V1H1 Mir1966-201ENSMUST00000158807 108 ntBASIC1.01□□□□□ -2.25
Ckap2Q3V1H1 Mir6377-201ENSMUST00000183760 114 ntBASIC1.01□□□□□ -2.25
Ckap2Q3V1H1 Gm20118-201ENSMUST00000187207 162 ntBASIC1.01□□□□□ -2.25
Ckap2Q3V1H1 Gm18665-201ENSMUST00000189783 270 ntBASIC1.01□□□□□ -2.25
Ckap2Q3V1H1 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Ckap2Q3V1H1 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1□□□□□ -2.25
Ckap2Q3V1H1 Gm26082-201ENSMUST00000104070 127 ntBASIC1□□□□□ -2.25
Ckap2Q3V1H1 Gm14502-201ENSMUST00000118154 113 ntBASIC1□□□□□ -2.25
Ckap2Q3V1H1 Gm23763-201ENSMUST00000158345 60 ntBASIC1□□□□□ -2.25
Ckap2Q3V1H1 Gm24054-201ENSMUST00000158619 105 ntBASIC1□□□□□ -2.25
Ckap2Q3V1H1 Mir8119-201ENSMUST00000183371 129 ntBASIC1□□□□□ -2.25
Ckap2Q3V1H1 Gm27587-201ENSMUST00000185116 163 ntBASIC1□□□□□ -2.25
Ckap2Q3V1H1 Mir6928-201ENSMUST00000185166 70 ntBASIC1□□□□□ -2.25
Ckap2Q3V1H1 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1□□□□□ -2.25
Ckap2Q3V1H1 Mir324-201ENSMUST00000083600 89 ntBASIC1□□□□□ -2.25
Ckap2Q3V1H1 Gm25611-201ENSMUST00000104017 133 ntBASIC0.99□□□□□ -2.25
Ckap2Q3V1H1 Gm22105-201ENSMUST00000116734 116 ntBASIC0.99□□□□□ -2.25
Ckap2Q3V1H1 Gm22332-201ENSMUST00000158072 126 ntBASIC0.99□□□□□ -2.25
Ckap2Q3V1H1 Gm22515-201ENSMUST00000158273 305 ntBASIC0.99□□□□□ -2.25
Ckap2Q3V1H1 Gm44338-201ENSMUST00000198614 110 ntBASIC0.99□□□□□ -2.25
Ckap2Q3V1H1 Snord61-201ENSMUST00000083176 71 ntBASIC0.99□□□□□ -2.25
Ckap2Q3V1H1 Gm25136-201ENSMUST00000083253 115 ntBASIC0.99□□□□□ -2.25
Ckap2Q3V1H1 Gm23320-201ENSMUST00000104462 127 ntBASIC0.98□□□□□ -2.25
Ckap2Q3V1H1 Gm22815-201ENSMUST00000157451 62 ntBASIC0.98□□□□□ -2.25
Ckap2Q3V1H1 Gm24401-201ENSMUST00000157868 91 ntBASIC0.98□□□□□ -2.25
Ckap2Q3V1H1 Gm23859-201ENSMUST00000158383 64 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 267.6 ms