Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm24457-201ENSMUST00000083196 105 ntBASIC0.76□□□□□ -2.29
Trim40Q3UWA4 Gm24616-201ENSMUST00000083274 139 ntBASIC0.76□□□□□ -2.29
Trim40Q3UWA4 Gm25611-201ENSMUST00000104017 133 ntBASIC0.75□□□□□ -2.29
Trim40Q3UWA4 Mir466h-201ENSMUST00000104748 81 ntBASIC0.75□□□□□ -2.29
Trim40Q3UWA4 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.75□□□□□ -2.29
Trim40Q3UWA4 Gm25968-201ENSMUST00000157167 100 ntBASIC0.75□□□□□ -2.29
Trim40Q3UWA4 Gm23080-201ENSMUST00000157846 103 ntBASIC0.75□□□□□ -2.29
Trim40Q3UWA4 Gm26358-201ENSMUST00000158215 97 ntBASIC0.75□□□□□ -2.29
Trim40Q3UWA4 Gm16546-201ENSMUST00000159442 355 ntBASIC0.75□□□□□ -2.29
Trim40Q3UWA4 Gm22801-201ENSMUST00000175624 84 ntBASIC0.75□□□□□ -2.29
Trim40Q3UWA4 Mir201-201ENSMUST00000083470 66 ntBASIC0.75□□□□□ -2.29
Trim40Q3UWA4 Mir488-201ENSMUST00000093595 109 ntBASIC0.75□□□□□ -2.29
Trim40Q3UWA4 Mir489-201ENSMUST00000093599 107 ntBASIC0.75□□□□□ -2.29
Trim40Q3UWA4 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.75□□□□□ -2.29
Trim40Q3UWA4 Gm3788-201ENSMUST00000119949 136 ntBASIC0.74□□□□□ -2.29
Trim40Q3UWA4 Gm24509-201ENSMUST00000157086 101 ntBASIC0.74□□□□□ -2.29
Trim40Q3UWA4 Gm25358-201ENSMUST00000157189 101 ntBASIC0.74□□□□□ -2.29
Trim40Q3UWA4 Gm22989-201ENSMUST00000158313 86 ntBASIC0.74□□□□□ -2.29
Trim40Q3UWA4 Gm20386-201ENSMUST00000174010 132 ntBASIC0.74□□□□□ -2.29
Trim40Q3UWA4 Mir7665-201ENSMUST00000184907 63 ntBASIC0.74□□□□□ -2.29
Trim40Q3UWA4 Mir3087-201ENSMUST00000199405 56 ntBASIC0.74□□□□□ -2.29
Trim40Q3UWA4 Gm44922-201ENSMUST00000206690 90 ntBASIC0.74□□□□□ -2.29
Trim40Q3UWA4 Snord32a-201ENSMUST00000083285 83 ntBASIC0.74□□□□□ -2.29
Trim40Q3UWA4 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.74□□□□□ -2.29
Trim40Q3UWA4 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Trim40Q3UWA4 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
Trim40Q3UWA4 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.73□□□□□ -2.29
Trim40Q3UWA4 Gm23011-201ENSMUST00000104148 132 ntBASIC0.73□□□□□ -2.29
Trim40Q3UWA4 Gm25316-201ENSMUST00000116826 118 ntBASIC0.73□□□□□ -2.29
Trim40Q3UWA4 Gm24942-201ENSMUST00000158328 114 ntBASIC0.73□□□□□ -2.29
Trim40Q3UWA4 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
Trim40Q3UWA4 Mir15a-201ENSMUST00000175266 84 ntBASIC0.73□□□□□ -2.29
Trim40Q3UWA4 Gm23267-201ENSMUST00000178490 132 ntBASIC0.73□□□□□ -2.29
Trim40Q3UWA4 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Trim40Q3UWA4 Gm27326-201ENSMUST00000183504 95 ntBASIC0.73□□□□□ -2.29
Trim40Q3UWA4 Gm38113-201ENSMUST00000193704 201 ntBASIC0.73□□□□□ -2.29
Trim40Q3UWA4 Gm8219-201ENSMUST00000218309 242 ntBASIC0.73□□□□□ -2.29
Trim40Q3UWA4 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.73□□□□□ -2.29
Trim40Q3UWA4 Gm8508-201ENSMUST00000061226 363 ntBASIC0.73□□□□□ -2.29
Trim40Q3UWA4 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.73□□□□□ -2.29
Trim40Q3UWA4 Mir33-201ENSMUST00000083531 69 ntBASIC0.73□□□□□ -2.29
Trim40Q3UWA4 Gm25544-201ENSMUST00000122676 120 ntBASIC0.72□□□□□ -2.29
Trim40Q3UWA4 Gm27934-201ENSMUST00000158795 63 ntBASIC0.72□□□□□ -2.29
Trim40Q3UWA4 Gm25166-201ENSMUST00000158909 111 ntBASIC0.72□□□□□ -2.29
Trim40Q3UWA4 Mir3079-201ENSMUST00000175428 90 ntBASIC0.72□□□□□ -2.29
Trim40Q3UWA4 Gm23864-201ENSMUST00000177607 107 ntBASIC0.72□□□□□ -2.29
Trim40Q3UWA4 Gm22887-201ENSMUST00000178586 107 ntBASIC0.72□□□□□ -2.29
Trim40Q3UWA4 Gm42623-201ENSMUST00000197225 379 ntBASIC0.72□□□□□ -2.29
Trim40Q3UWA4 Mir27b-201ENSMUST00000083541 73 ntBASIC0.72□□□□□ -2.29
Trim40Q3UWA4 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.71□□□□□ -2.3
Trim40Q3UWA4 Gm26338-201ENSMUST00000102372 110 ntBASIC0.71□□□□□ -2.3
Trim40Q3UWA4 Gm26274-201ENSMUST00000157103 321 ntBASIC0.71□□□□□ -2.3
Trim40Q3UWA4 Gm22079-201ENSMUST00000157592 106 ntBASIC0.71□□□□□ -2.3
Trim40Q3UWA4 Gm22332-201ENSMUST00000158072 126 ntBASIC0.71□□□□□ -2.3
Trim40Q3UWA4 Gm23967-201ENSMUST00000175062 78 ntBASIC0.71□□□□□ -2.3
Trim40Q3UWA4 Mir21b-201ENSMUST00000184317 108 ntBASIC0.71□□□□□ -2.3
Trim40Q3UWA4 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Trim40Q3UWA4 Mir7116-201ENSMUST00000195956 70 ntBASIC0.71□□□□□ -2.3
Trim40Q3UWA4 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.71□□□□□ -2.3
Trim40Q3UWA4 Gm23377-201ENSMUST00000082943 126 ntBASIC0.71□□□□□ -2.3
Trim40Q3UWA4 Mir411-201ENSMUST00000083543 82 ntBASIC0.71□□□□□ -2.3
Trim40Q3UWA4 Mir532-201ENSMUST00000093630 96 ntBASIC0.71□□□□□ -2.3
Trim40Q3UWA4 Mir695-201ENSMUST00000102261 109 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Gm25943-201ENSMUST00000103791 90 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Mir466b-7-201ENSMUST00000103804 88 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Mir466b-5-201ENSMUST00000103900 88 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Gm22815-201ENSMUST00000157451 62 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Gm23838-201ENSMUST00000158067 162 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Gm26403-201ENSMUST00000158500 105 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Gm23209-201ENSMUST00000158667 110 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Mir1933-201ENSMUST00000158930 88 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Mir466b-4-201ENSMUST00000178801 90 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Gm25285-201ENSMUST00000178951 90 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Mir466b-6-201ENSMUST00000180061 90 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Mir466c-2-201ENSMUST00000180211 90 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Mir6928-201ENSMUST00000185166 70 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Gm44320-201ENSMUST00000199276 86 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.7□□□□□ -2.3
Trim40Q3UWA4 Mir1298-201ENSMUST00000116681 98 ntBASIC0.69□□□□□ -2.3
Trim40Q3UWA4 Gm25110-201ENSMUST00000116684 121 ntBASIC0.69□□□□□ -2.3
Trim40Q3UWA4 Gm25775-201ENSMUST00000116716 121 ntBASIC0.69□□□□□ -2.3
Trim40Q3UWA4 Gm24795-201ENSMUST00000116737 121 ntBASIC0.69□□□□□ -2.3
Trim40Q3UWA4 Gm25171-201ENSMUST00000116926 121 ntBASIC0.69□□□□□ -2.3
Trim40Q3UWA4 Gm24747-201ENSMUST00000157835 87 ntBASIC0.69□□□□□ -2.3
Trim40Q3UWA4 Gm24154-201ENSMUST00000175261 130 ntBASIC0.69□□□□□ -2.3
Trim40Q3UWA4 Gm22348-201ENSMUST00000178674 79 ntBASIC0.69□□□□□ -2.3
Trim40Q3UWA4 Gm37997-201ENSMUST00000193515 267 ntBASIC0.69□□□□□ -2.3
Trim40Q3UWA4 Gm42795-201ENSMUST00000198847 76 ntBASIC0.69□□□□□ -2.3
Trim40Q3UWA4 Gm23329-201ENSMUST00000157415 108 ntBASIC0.68□□□□□ -2.3
Trim40Q3UWA4 Gm24547-201ENSMUST00000158649 149 ntBASIC0.68□□□□□ -2.3
Trim40Q3UWA4 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.68□□□□□ -2.3
Trim40Q3UWA4 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.68□□□□□ -2.3
Trim40Q3UWA4 Gm23735-201ENSMUST00000082551 134 ntBASIC0.68□□□□□ -2.3
Trim40Q3UWA4 Mir500-201ENSMUST00000093600 92 ntBASIC0.68□□□□□ -2.3
Trim40Q3UWA4 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
Trim40Q3UWA4 Gm26097-201ENSMUST00000179642 93 ntBASIC0.67□□□□□ -2.3
Trim40Q3UWA4 Gm43381-201ENSMUST00000198553 165 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 152.5 ms