Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.21□□□□□ -2.44
Upf3bQ3ULL6 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.21□□□□□ -2.44
Upf3bQ3ULL6 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-0.21□□□□□ -2.44
Upf3bQ3ULL6 Gm29512-201ENSMUST00000185544 315 ntBASIC-0.21□□□□□ -2.44
Upf3bQ3ULL6 Mir721-201ENSMUST00000200230 88 ntBASIC-0.21□□□□□ -2.44
Upf3bQ3ULL6 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.21□□□□□ -2.44
Upf3bQ3ULL6 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.21□□□□□ -2.44
Upf3bQ3ULL6 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.21□□□□□ -2.44
Upf3bQ3ULL6 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-0.21□□□□□ -2.44
Upf3bQ3ULL6 Gm25323-201ENSMUST00000122555 103 ntBASIC-0.22□□□□□ -2.44
Upf3bQ3ULL6 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.22□□□□□ -2.44
Upf3bQ3ULL6 Gm44387-201ENSMUST00000196298 145 ntBASIC-0.22□□□□□ -2.44
Upf3bQ3ULL6 Gm22364-201ENSMUST00000083097 98 ntBASIC-0.22□□□□□ -2.44
Upf3bQ3ULL6 Mir214-201ENSMUST00000083582 110 ntBASIC-0.22□□□□□ -2.44
Upf3bQ3ULL6 Mir181a-1-201ENSMUST00000083631 87 ntBASIC-0.22□□□□□ -2.44
Upf3bQ3ULL6 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.22□□□□□ -2.44
Upf3bQ3ULL6 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.45
Upf3bQ3ULL6 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.23□□□□□ -2.45
Upf3bQ3ULL6 Gm26474-201ENSMUST00000116762 122 ntBASIC-0.23□□□□□ -2.45
Upf3bQ3ULL6 Gm22032-201ENSMUST00000116946 116 ntBASIC-0.23□□□□□ -2.45
Upf3bQ3ULL6 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC-0.23□□□□□ -2.45
Upf3bQ3ULL6 Gm14919-201ENSMUST00000120839 390 ntBASIC-0.24□□□□□ -2.45
Upf3bQ3ULL6 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.24□□□□□ -2.45
Upf3bQ3ULL6 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.24□□□□□ -2.45
Upf3bQ3ULL6 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC-0.24□□□□□ -2.45
Upf3bQ3ULL6 Snord85-201ENSMUST00000083262 73 ntBASIC-0.24□□□□□ -2.45
Upf3bQ3ULL6 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.25□□□□□ -2.45
Upf3bQ3ULL6 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.25□□□□□ -2.45
Upf3bQ3ULL6 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.25□□□□□ -2.45
Upf3bQ3ULL6 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.25□□□□□ -2.45
Upf3bQ3ULL6 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.25□□□□□ -2.45
Upf3bQ3ULL6 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.25□□□□□ -2.45
Upf3bQ3ULL6 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.25□□□□□ -2.45
Upf3bQ3ULL6 Gm25875-201ENSMUST00000104323 107 ntBASIC-0.26□□□□□ -2.45
Upf3bQ3ULL6 Gm22999-201ENSMUST00000157082 88 ntBASIC-0.26□□□□□ -2.45
Upf3bQ3ULL6 Gm26402-201ENSMUST00000158499 113 ntBASIC-0.26□□□□□ -2.45
Upf3bQ3ULL6 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.26□□□□□ -2.45
Upf3bQ3ULL6 AC153526.1-201ENSMUST00000219750 190 ntBASIC-0.26□□□□□ -2.45
Upf3bQ3ULL6 AC164117.2-201ENSMUST00000222090 327 ntBASIC-0.26□□□□□ -2.45
Upf3bQ3ULL6 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.26□□□□□ -2.45
Upf3bQ3ULL6 Gm25634-201ENSMUST00000082667 105 ntBASIC-0.26□□□□□ -2.45
Upf3bQ3ULL6 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
Upf3bQ3ULL6 Gm11835-201ENSMUST00000120635 663 ntBASIC-0.27□□□□□ -2.45
Upf3bQ3ULL6 Gm23655-201ENSMUST00000122627 105 ntBASIC-0.27□□□□□ -2.45
Upf3bQ3ULL6 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.27□□□□□ -2.45
Upf3bQ3ULL6 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.27□□□□□ -2.45
Upf3bQ3ULL6 Gm13797-201ENSMUST00000121792 120 ntBASIC-0.28□□□□□ -2.45
Upf3bQ3ULL6 Gm15213-201ENSMUST00000122098 216 ntBASIC-0.28□□□□□ -2.45
Upf3bQ3ULL6 Gm25771-201ENSMUST00000158565 144 ntBASIC-0.28□□□□□ -2.45
Upf3bQ3ULL6 Gm24737-201ENSMUST00000158861 100 ntBASIC-0.28□□□□□ -2.45
Upf3bQ3ULL6 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.28□□□□□ -2.45
Upf3bQ3ULL6 Mir669k-201ENSMUST00000177742 127 ntBASIC-0.28□□□□□ -2.45
Upf3bQ3ULL6 Gm25024-201ENSMUST00000179667 104 ntBASIC-0.28□□□□□ -2.45
Upf3bQ3ULL6 Gm24488-201ENSMUST00000179934 127 ntBASIC-0.28□□□□□ -2.45
Upf3bQ3ULL6 Gm25673-201ENSMUST00000179957 127 ntBASIC-0.28□□□□□ -2.45
Upf3bQ3ULL6 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.28□□□□□ -2.45
Upf3bQ3ULL6 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.28□□□□□ -2.45
Upf3bQ3ULL6 Gm29140-201ENSMUST00000190187 476 ntBASIC-0.28□□□□□ -2.45
Upf3bQ3ULL6 AC125374.2-201ENSMUST00000214278 162 ntBASIC-0.28□□□□□ -2.45
Upf3bQ3ULL6 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.28□□□□□ -2.45
Upf3bQ3ULL6 Gm22686-201ENSMUST00000082847 100 ntBASIC-0.28□□□□□ -2.45
Upf3bQ3ULL6 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
Upf3bQ3ULL6 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-0.29□□□□□ -2.46
Upf3bQ3ULL6 Gm22815-201ENSMUST00000157451 62 ntBASIC-0.29□□□□□ -2.46
Upf3bQ3ULL6 Gm24211-201ENSMUST00000158264 107 ntBASIC-0.29□□□□□ -2.46
Upf3bQ3ULL6 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.29□□□□□ -2.46
Upf3bQ3ULL6 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.29□□□□□ -2.46
Upf3bQ3ULL6 Gm37313-201ENSMUST00000191673 290 ntBASIC-0.29□□□□□ -2.46
Upf3bQ3ULL6 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.29□□□□□ -2.46
Upf3bQ3ULL6 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.29□□□□□ -2.46
Upf3bQ3ULL6 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC-0.29□□□□□ -2.46
Upf3bQ3ULL6 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.29□□□□□ -2.46
Upf3bQ3ULL6 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.29□□□□□ -2.46
Upf3bQ3ULL6 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.3□□□□□ -2.46
Upf3bQ3ULL6 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.3□□□□□ -2.46
Upf3bQ3ULL6 Gm13345-201ENSMUST00000121928 228 ntBASIC-0.3□□□□□ -2.46
Upf3bQ3ULL6 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC-0.3□□□□□ -2.46
Upf3bQ3ULL6 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.3□□□□□ -2.46
Upf3bQ3ULL6 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.3□□□□□ -2.46
Upf3bQ3ULL6 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.3□□□□□ -2.46
Upf3bQ3ULL6 Ighv12-2-201ENSMUST00000191949 362 ntBASIC-0.3□□□□□ -2.46
Upf3bQ3ULL6 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.3□□□□□ -2.46
Upf3bQ3ULL6 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.3□□□□□ -2.46
Upf3bQ3ULL6 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.3□□□□□ -2.46
Upf3bQ3ULL6 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.3□□□□□ -2.46
Upf3bQ3ULL6 Snord60-201ENSMUST00000082834 78 ntBASIC-0.3□□□□□ -2.46
Upf3bQ3ULL6 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.3□□□□□ -2.46
Upf3bQ3ULL6 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.31□□□□□ -2.46
Upf3bQ3ULL6 Gm26293-201ENSMUST00000104170 84 ntBASIC-0.31□□□□□ -2.46
Upf3bQ3ULL6 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.31□□□□□ -2.46
Upf3bQ3ULL6 Gm12797-201ENSMUST00000118645 273 ntBASIC-0.31□□□□□ -2.46
Upf3bQ3ULL6 Gm24392-201ENSMUST00000158136 103 ntBASIC-0.31□□□□□ -2.46
Upf3bQ3ULL6 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.31□□□□□ -2.46
Upf3bQ3ULL6 Gm24667-201ENSMUST00000158938 103 ntBASIC-0.31□□□□□ -2.46
Upf3bQ3ULL6 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.31□□□□□ -2.46
Upf3bQ3ULL6 Gm45005-201ENSMUST00000206640 157 ntBASIC-0.31□□□□□ -2.46
Upf3bQ3ULL6 AC166341.3-201ENSMUST00000221861 114 ntBASIC-0.31□□□□□ -2.46
Upf3bQ3ULL6 CT030166.3-201ENSMUST00000223203 193 ntBASIC-0.31□□□□□ -2.46
Upf3bQ3ULL6 Gm23242-201ENSMUST00000083055 107 ntBASIC-0.31□□□□□ -2.46
Upf3bQ3ULL6 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 180 ms