Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.95□□□□□ -2.1
Sf3b6P59708 Snora41-201ENSMUST00000082668 132 ntBASIC1.95□□□□□ -2.1
Sf3b6P59708 Gm23299-201ENSMUST00000082708 79 ntBASIC1.95□□□□□ -2.1
Sf3b6P59708 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
Sf3b6P59708 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Sf3b6P59708 Gm25611-201ENSMUST00000104017 133 ntBASIC1.94□□□□□ -2.1
Sf3b6P59708 Gm14674-201ENSMUST00000117816 342 ntBASIC1.94□□□□□ -2.1
Sf3b6P59708 Gm24900-201ENSMUST00000158128 134 ntBASIC1.94□□□□□ -2.1
Sf3b6P59708 Gm22093-201ENSMUST00000158980 111 ntBASIC1.94□□□□□ -2.1
Sf3b6P59708 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.94□□□□□ -2.1
Sf3b6P59708 Gm25680-201ENSMUST00000116917 126 ntBASIC1.93□□□□□ -2.1
Sf3b6P59708 Gm22635-201ENSMUST00000116962 126 ntBASIC1.93□□□□□ -2.1
Sf3b6P59708 Gm22815-201ENSMUST00000157451 62 ntBASIC1.93□□□□□ -2.1
Sf3b6P59708 Gm25241-201ENSMUST00000174909 84 ntBASIC1.93□□□□□ -2.1
Sf3b6P59708 Gm26217-201ENSMUST00000175212 84 ntBASIC1.93□□□□□ -2.1
Sf3b6P59708 Gm27517-201ENSMUST00000184347 236 ntBASIC1.93□□□□□ -2.1
Sf3b6P59708 Gm44807-201ENSMUST00000206115 154 ntBASIC1.93□□□□□ -2.1
Sf3b6P59708 Gm24044-201ENSMUST00000083107 156 ntBASIC1.93□□□□□ -2.1
Sf3b6P59708 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Sf3b6P59708 Gm25610-201ENSMUST00000104016 129 ntBASIC1.92□□□□□ -2.1
Sf3b6P59708 Gm26015-201ENSMUST00000104402 125 ntBASIC1.92□□□□□ -2.1
Sf3b6P59708 Gm24274-201ENSMUST00000116787 124 ntBASIC1.92□□□□□ -2.1
Sf3b6P59708 Gm25544-201ENSMUST00000122676 120 ntBASIC1.92□□□□□ -2.1
Sf3b6P59708 Gm22845-201ENSMUST00000157712 104 ntBASIC1.92□□□□□ -2.1
Sf3b6P59708 Gm25460-201ENSMUST00000157954 127 ntBASIC1.92□□□□□ -2.1
Sf3b6P59708 Gm25011-201ENSMUST00000158398 126 ntBASIC1.92□□□□□ -2.1
Sf3b6P59708 Gm25678-201ENSMUST00000174984 73 ntBASIC1.92□□□□□ -2.1
Sf3b6P59708 Gm27369-201ENSMUST00000185182 71 ntBASIC1.92□□□□□ -2.1
Sf3b6P59708 Gm23100-201ENSMUST00000083455 141 ntBASIC1.92□□□□□ -2.1
Sf3b6P59708 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Sf3b6P59708 Traj61-201ENSMUST00000165025 72 ntBASIC1.91□□□□□ -2.1
Sf3b6P59708 Gm22403-201ENSMUST00000174919 84 ntBASIC1.91□□□□□ -2.1
Sf3b6P59708 Gm28256-201ENSMUST00000188953 139 ntBASIC1.91□□□□□ -2.1
Sf3b6P59708 Gm28559-201ENSMUST00000190532 139 ntBASIC1.91□□□□□ -2.1
Sf3b6P59708 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC1.91□□□□□ -2.1
Sf3b6P59708 Mir6925-201ENSMUST00000197857 70 ntBASIC1.91□□□□□ -2.1
Sf3b6P59708 AC160962.3-201ENSMUST00000225914 112 ntBASIC1.91□□□□□ -2.1
Sf3b6P59708 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.9□□□□□ -2.11
Sf3b6P59708 Gm25978-201ENSMUST00000158698 90 ntBASIC1.9□□□□□ -2.11
Sf3b6P59708 Gm23963-201ENSMUST00000179603 77 ntBASIC1.9□□□□□ -2.11
Sf3b6P59708 Mir7062-201ENSMUST00000185038 66 ntBASIC1.9□□□□□ -2.11
Sf3b6P59708 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.9□□□□□ -2.11
Sf3b6P59708 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Sf3b6P59708 mt-Tv-201ENSMUST00000082389 69 ntBASIC1.9□□□□□ -2.11
Sf3b6P59708 Mir30d-201ENSMUST00000083503 82 ntBASIC1.9□□□□□ -2.11
Sf3b6P59708 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
Sf3b6P59708 Gm26421-201ENSMUST00000104279 132 ntBASIC1.89□□□□□ -2.11
Sf3b6P59708 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.89□□□□□ -2.11
Sf3b6P59708 Gm24229-201ENSMUST00000158830 118 ntBASIC1.89□□□□□ -2.11
Sf3b6P59708 Gm22802-201ENSMUST00000175621 89 ntBASIC1.89□□□□□ -2.11
Sf3b6P59708 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.89□□□□□ -2.11
Sf3b6P59708 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Sf3b6P59708 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Sf3b6P59708 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Sf3b6P59708 Snord78-201ENSMUST00000104032 66 ntBASIC1.88□□□□□ -2.11
Sf3b6P59708 Mir3061-201ENSMUST00000175129 91 ntBASIC1.88□□□□□ -2.11
Sf3b6P59708 Trbv7-201ENSMUST00000193339 402 ntBASIC1.88□□□□□ -2.11
Sf3b6P59708 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.88□□□□□ -2.11
Sf3b6P59708 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Sf3b6P59708 Gm25529-201ENSMUST00000104850 92 ntBASIC1.87□□□□□ -2.11
Sf3b6P59708 Gm25393-201ENSMUST00000157336 285 ntBASIC1.87□□□□□ -2.11
Sf3b6P59708 Gm25423-201ENSMUST00000157609 107 ntBASIC1.87□□□□□ -2.11
Sf3b6P59708 Gm22200-201ENSMUST00000158614 67 ntBASIC1.87□□□□□ -2.11
Sf3b6P59708 Gm25838-201ENSMUST00000158920 120 ntBASIC1.87□□□□□ -2.11
Sf3b6P59708 Gm21885-201ENSMUST00000178891 327 ntBASIC1.87□□□□□ -2.11
Sf3b6P59708 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.87□□□□□ -2.11
Sf3b6P59708 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Sf3b6P59708 Mir544-201ENSMUST00000103813 78 ntBASIC1.86□□□□□ -2.11
Sf3b6P59708 Gm16328-201ENSMUST00000126985 196 ntBASIC1.86□□□□□ -2.11
Sf3b6P59708 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.86□□□□□ -2.11
Sf3b6P59708 Gm24649-201ENSMUST00000157106 134 ntBASIC1.86□□□□□ -2.11
Sf3b6P59708 Gm23170-201ENSMUST00000157158 106 ntBASIC1.86□□□□□ -2.11
Sf3b6P59708 Gm25329-201ENSMUST00000158041 126 ntBASIC1.86□□□□□ -2.11
Sf3b6P59708 Gm23813-201ENSMUST00000175153 77 ntBASIC1.86□□□□□ -2.11
Sf3b6P59708 Mir3103-201ENSMUST00000175474 67 ntBASIC1.86□□□□□ -2.11
Sf3b6P59708 Gm5900-201ENSMUST00000179862 375 ntBASIC1.86□□□□□ -2.11
Sf3b6P59708 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.86□□□□□ -2.11
Sf3b6P59708 Snord14a-201ENSMUST00000082807 87 ntBASIC1.86□□□□□ -2.11
Sf3b6P59708 Gm25038-201ENSMUST00000082928 130 ntBASIC1.86□□□□□ -2.11
Sf3b6P59708 Mir7-1-201ENSMUST00000083500 108 ntBASIC1.86□□□□□ -2.11
Sf3b6P59708 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Sf3b6P59708 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Sf3b6P59708 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Sf3b6P59708 Gm22494-201ENSMUST00000104495 128 ntBASIC1.85□□□□□ -2.11
Sf3b6P59708 Gm24650-201ENSMUST00000157105 103 ntBASIC1.85□□□□□ -2.11
Sf3b6P59708 Gm25887-201ENSMUST00000157777 84 ntBASIC1.85□□□□□ -2.11
Sf3b6P59708 Gm23384-201ENSMUST00000158593 103 ntBASIC1.85□□□□□ -2.11
Sf3b6P59708 Snora24-201ENSMUST00000174989 130 ntBASIC1.85□□□□□ -2.11
Sf3b6P59708 Gm25035-201ENSMUST00000175414 77 ntBASIC1.85□□□□□ -2.11
Sf3b6P59708 Mir7217-201ENSMUST00000200304 62 ntBASIC1.85□□□□□ -2.11
Sf3b6P59708 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.84□□□□□ -2.11
Sf3b6P59708 Gm22319-201ENSMUST00000157147 122 ntBASIC1.84□□□□□ -2.11
Sf3b6P59708 Gm16550-201ENSMUST00000162550 126 ntBASIC1.84□□□□□ -2.11
Sf3b6P59708 Gm27399-201ENSMUST00000184250 78 ntBASIC1.84□□□□□ -2.11
Sf3b6P59708 Snord7-201ENSMUST00000083781 97 ntBASIC1.84□□□□□ -2.11
Sf3b6P59708 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.84□□□□□ -2.12
Sf3b6P59708 Gm24984-201ENSMUST00000104454 133 ntBASIC1.83□□□□□ -2.12
Sf3b6P59708 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.83□□□□□ -2.12
Sf3b6P59708 Gm15654-201ENSMUST00000152660 300 ntBASIC1.83□□□□□ -2.12
Sf3b6P59708 Gm23838-201ENSMUST00000158067 162 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 160.7 ms