Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm25750-201ENSMUST00000175483 112 ntBASIC1.26□□□□□ -2.21
NcanP55066 Mir21b-201ENSMUST00000184317 108 ntBASIC1.26□□□□□ -2.21
NcanP55066 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.26□□□□□ -2.21
NcanP55066 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.25□□□□□ -2.21
NcanP55066 Gm22477-201ENSMUST00000122569 316 ntBASIC1.25□□□□□ -2.21
NcanP55066 Gm22559-201ENSMUST00000157329 134 ntBASIC1.25□□□□□ -2.21
NcanP55066 Gm26412-201ENSMUST00000157666 55 ntBASIC1.25□□□□□ -2.21
NcanP55066 Mir6389-201ENSMUST00000183661 102 ntBASIC1.25□□□□□ -2.21
NcanP55066 Gm43749-201ENSMUST00000199345 352 ntBASIC1.25□□□□□ -2.21
NcanP55066 Gm22884-201ENSMUST00000083127 140 ntBASIC1.25□□□□□ -2.21
NcanP55066 Gm25378-201ENSMUST00000104333 129 ntBASIC1.24□□□□□ -2.21
NcanP55066 Gm14039-201ENSMUST00000118705 101 ntBASIC1.24□□□□□ -2.21
NcanP55066 Gm25323-201ENSMUST00000122555 103 ntBASIC1.24□□□□□ -2.21
NcanP55066 Gm25558-201ENSMUST00000158083 106 ntBASIC1.24□□□□□ -2.21
NcanP55066 Gm22088-201ENSMUST00000158341 117 ntBASIC1.24□□□□□ -2.21
NcanP55066 Gm25716-201ENSMUST00000158628 104 ntBASIC1.24□□□□□ -2.21
NcanP55066 Mir3061-201ENSMUST00000175129 91 ntBASIC1.24□□□□□ -2.21
NcanP55066 Gm26097-201ENSMUST00000179642 93 ntBASIC1.24□□□□□ -2.21
NcanP55066 Gm27711-201ENSMUST00000183802 118 ntBASIC1.24□□□□□ -2.21
NcanP55066 Gm42855-201ENSMUST00000197388 253 ntBASIC1.24□□□□□ -2.21
NcanP55066 Gm22743-201ENSMUST00000083445 133 ntBASIC1.24□□□□□ -2.21
NcanP55066 Gm22148-201ENSMUST00000104445 107 ntBASIC1.23□□□□□ -2.21
NcanP55066 Gm12309-201ENSMUST00000119889 182 ntBASIC1.23□□□□□ -2.21
NcanP55066 Gm26403-201ENSMUST00000158500 105 ntBASIC1.23□□□□□ -2.21
NcanP55066 Gm28669-201ENSMUST00000188400 100 ntBASIC1.23□□□□□ -2.21
NcanP55066 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.23□□□□□ -2.21
NcanP55066 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.23□□□□□ -2.21
NcanP55066 Snord1a-201ENSMUST00000083160 74 ntBASIC1.23□□□□□ -2.21
NcanP55066 Gm24523-201ENSMUST00000083965 132 ntBASIC1.23□□□□□ -2.21
NcanP55066 Mir488-201ENSMUST00000093595 109 ntBASIC1.23□□□□□ -2.21
NcanP55066 Mir1298-201ENSMUST00000116681 98 ntBASIC1.22□□□□□ -2.21
NcanP55066 Gm11334-201ENSMUST00000121969 156 ntBASIC1.22□□□□□ -2.21
NcanP55066 Gm22850-201ENSMUST00000157714 82 ntBASIC1.22□□□□□ -2.21
NcanP55066 Gm23277-201ENSMUST00000157914 136 ntBASIC1.22□□□□□ -2.21
NcanP55066 Gm22606-201ENSMUST00000158290 103 ntBASIC1.22□□□□□ -2.21
NcanP55066 Gm22163-201ENSMUST00000158408 135 ntBASIC1.22□□□□□ -2.21
NcanP55066 Gm25838-201ENSMUST00000158920 120 ntBASIC1.22□□□□□ -2.21
NcanP55066 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.22□□□□□ -2.21
NcanP55066 Gm22403-201ENSMUST00000174919 84 ntBASIC1.22□□□□□ -2.21
NcanP55066 Gm38364-201ENSMUST00000191814 179 ntBASIC1.22□□□□□ -2.21
NcanP55066 Gm44464-201ENSMUST00000198010 138 ntBASIC1.22□□□□□ -2.21
NcanP55066 Gm25081-201ENSMUST00000082534 108 ntBASIC1.22□□□□□ -2.21
NcanP55066 Gm11792-201ENSMUST00000120640 168 ntBASIC1.21□□□□□ -2.22
NcanP55066 Gm13246-201ENSMUST00000120994 315 ntBASIC1.21□□□□□ -2.22
NcanP55066 Gm25882-201ENSMUST00000157784 85 ntBASIC1.21□□□□□ -2.22
NcanP55066 Gm22967-201ENSMUST00000157956 239 ntBASIC1.21□□□□□ -2.22
NcanP55066 Gm23419-201ENSMUST00000175523 84 ntBASIC1.21□□□□□ -2.22
NcanP55066 AC150901.1-201ENSMUST00000208407 145 ntBASIC1.21□□□□□ -2.22
NcanP55066 Gm26018-201ENSMUST00000104406 128 ntBASIC1.2□□□□□ -2.22
NcanP55066 Gm15069-201ENSMUST00000117792 192 ntBASIC1.2□□□□□ -2.22
NcanP55066 Gm11856-201ENSMUST00000118712 276 ntBASIC1.2□□□□□ -2.22
NcanP55066 Gm15068-201ENSMUST00000119796 192 ntBASIC1.2□□□□□ -2.22
NcanP55066 Gm25108-201ENSMUST00000122473 78 ntBASIC1.2□□□□□ -2.22
NcanP55066 Gm22164-201ENSMUST00000158413 106 ntBASIC1.2□□□□□ -2.22
NcanP55066 Gm22888-201ENSMUST00000158640 77 ntBASIC1.2□□□□□ -2.22
NcanP55066 Gm16546-201ENSMUST00000159442 355 ntBASIC1.2□□□□□ -2.22
NcanP55066 Gm22286-201ENSMUST00000179708 107 ntBASIC1.2□□□□□ -2.22
NcanP55066 Gm28862-201ENSMUST00000188246 163 ntBASIC1.2□□□□□ -2.22
NcanP55066 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.2□□□□□ -2.22
NcanP55066 Gm44338-201ENSMUST00000198614 110 ntBASIC1.2□□□□□ -2.22
NcanP55066 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.2□□□□□ -2.22
NcanP55066 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.2□□□□□ -2.22
NcanP55066 Gm23299-201ENSMUST00000082708 79 ntBASIC1.2□□□□□ -2.22
NcanP55066 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.19□□□□□ -2.22
NcanP55066 Gm13922-201ENSMUST00000119505 156 ntBASIC1.19□□□□□ -2.22
NcanP55066 Gm26415-201ENSMUST00000157673 292 ntBASIC1.19□□□□□ -2.22
NcanP55066 Gm25885-201ENSMUST00000157779 109 ntBASIC1.19□□□□□ -2.22
NcanP55066 Gm22612-201ENSMUST00000158293 101 ntBASIC1.19□□□□□ -2.22
NcanP55066 Gm24001-201ENSMUST00000158463 85 ntBASIC1.19□□□□□ -2.22
NcanP55066 Gm26213-201ENSMUST00000158582 110 ntBASIC1.19□□□□□ -2.22
NcanP55066 Gm24054-201ENSMUST00000158619 105 ntBASIC1.19□□□□□ -2.22
NcanP55066 Mir1966-201ENSMUST00000158807 108 ntBASIC1.19□□□□□ -2.22
NcanP55066 Gm26360-201ENSMUST00000158872 103 ntBASIC1.19□□□□□ -2.22
NcanP55066 Gm22699-201ENSMUST00000175376 105 ntBASIC1.19□□□□□ -2.22
NcanP55066 Snord96a-201ENSMUST00000082791 81 ntBASIC1.19□□□□□ -2.22
NcanP55066 Gm23578-201ENSMUST00000103943 104 ntBASIC1.18□□□□□ -2.22
NcanP55066 Gm26074-201ENSMUST00000104063 129 ntBASIC1.18□□□□□ -2.22
NcanP55066 Gm23907-201ENSMUST00000104595 189 ntBASIC1.18□□□□□ -2.22
NcanP55066 Mir880-201ENSMUST00000104809 78 ntBASIC1.18□□□□□ -2.22
NcanP55066 Snord100-201ENSMUST00000116836 74 ntBASIC1.18□□□□□ -2.22
NcanP55066 Gm11857-201ENSMUST00000119817 324 ntBASIC1.18□□□□□ -2.22
NcanP55066 Gm14671-201ENSMUST00000121790 262 ntBASIC1.18□□□□□ -2.22
NcanP55066 Gm24559-201ENSMUST00000157519 121 ntBASIC1.18□□□□□ -2.22
NcanP55066 Gm23080-201ENSMUST00000157846 103 ntBASIC1.18□□□□□ -2.22
NcanP55066 Gm23996-201ENSMUST00000158062 131 ntBASIC1.18□□□□□ -2.22
NcanP55066 Traj60-201ENSMUST00000167781 54 ntBASIC1.18□□□□□ -2.22
NcanP55066 Gm17020-201ENSMUST00000172274 274 ntBASIC1.18□□□□□ -2.22
NcanP55066 Gm27980-201ENSMUST00000184094 169 ntBASIC1.18□□□□□ -2.22
NcanP55066 Gm42988-201ENSMUST00000198116 225 ntBASIC1.18□□□□□ -2.22
NcanP55066 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
NcanP55066 Gm25855-201ENSMUST00000082787 72 ntBASIC1.18□□□□□ -2.22
NcanP55066 Gm24171-201ENSMUST00000104126 131 ntBASIC1.17□□□□□ -2.22
NcanP55066 Gm24793-201ENSMUST00000104289 132 ntBASIC1.17□□□□□ -2.22
NcanP55066 Gm13345-201ENSMUST00000121928 228 ntBASIC1.17□□□□□ -2.22
NcanP55066 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.17□□□□□ -2.22
NcanP55066 Gm24915-201ENSMUST00000157288 78 ntBASIC1.17□□□□□ -2.22
NcanP55066 Gm24000-201ENSMUST00000158063 89 ntBASIC1.17□□□□□ -2.22
NcanP55066 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
NcanP55066 Mir6381-201ENSMUST00000183426 87 ntBASIC1.17□□□□□ -2.22
NcanP55066 Gm27672-201ENSMUST00000183751 204 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms