Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm26339-201ENSMUST00000102368 99 ntBASIC1.54□□□□□ -2.16
Pdx1P52946 Gm25825-201ENSMUST00000157091 124 ntBASIC1.54□□□□□ -2.16
Pdx1P52946 Gm24246-201ENSMUST00000157315 132 ntBASIC1.54□□□□□ -2.16
Pdx1P52946 Gm22386-201ENSMUST00000158192 129 ntBASIC1.54□□□□□ -2.16
Pdx1P52946 Mir6351-201ENSMUST00000183826 99 ntBASIC1.54□□□□□ -2.16
Pdx1P52946 Snord43-201ENSMUST00000199549 108 ntBASIC1.54□□□□□ -2.16
Pdx1P52946 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.54□□□□□ -2.16
Pdx1P52946 CT571266.1-201ENSMUST00000222859 153 ntBASIC1.54□□□□□ -2.16
Pdx1P52946 Gm22454-201ENSMUST00000082583 107 ntBASIC1.54□□□□□ -2.16
Pdx1P52946 Mir155-201ENSMUST00000083463 65 ntBASIC1.54□□□□□ -2.16
Pdx1P52946 Mir151-201ENSMUST00000083678 68 ntBASIC1.54□□□□□ -2.16
Pdx1P52946 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.54□□□□□ -2.16
Pdx1P52946 Snora33-201ENSMUST00000093556 129 ntBASIC1.54□□□□□ -2.16
Pdx1P52946 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
Pdx1P52946 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Pdx1P52946 Gm26080-201ENSMUST00000104069 131 ntBASIC1.53□□□□□ -2.16
Pdx1P52946 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Pdx1P52946 Gm14674-201ENSMUST00000117816 342 ntBASIC1.53□□□□□ -2.16
Pdx1P52946 Gm12013-201ENSMUST00000121971 155 ntBASIC1.53□□□□□ -2.16
Pdx1P52946 Gm25323-201ENSMUST00000122555 103 ntBASIC1.53□□□□□ -2.16
Pdx1P52946 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.53□□□□□ -2.16
Pdx1P52946 Gm23567-201ENSMUST00000178005 107 ntBASIC1.53□□□□□ -2.16
Pdx1P52946 Gm24390-201ENSMUST00000179578 62 ntBASIC1.53□□□□□ -2.16
Pdx1P52946 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.53□□□□□ -2.16
Pdx1P52946 Gm22251-201ENSMUST00000083216 107 ntBASIC1.53□□□□□ -2.16
Pdx1P52946 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.53□□□□□ -2.16
Pdx1P52946 Mir410-201ENSMUST00000083563 81 ntBASIC1.53□□□□□ -2.16
Pdx1P52946 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Pdx1P52946 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.53□□□□□ -2.17
Pdx1P52946 Gm24598-201ENSMUST00000122510 74 ntBASIC1.52□□□□□ -2.17
Pdx1P52946 Mir1949-201ENSMUST00000157434 141 ntBASIC1.52□□□□□ -2.17
Pdx1P52946 Gm22729-201ENSMUST00000158088 129 ntBASIC1.52□□□□□ -2.17
Pdx1P52946 Gm28270-201ENSMUST00000188550 109 ntBASIC1.52□□□□□ -2.17
Pdx1P52946 Gm28328-201ENSMUST00000188869 109 ntBASIC1.52□□□□□ -2.17
Pdx1P52946 Gm43381-201ENSMUST00000198553 165 ntBASIC1.52□□□□□ -2.17
Pdx1P52946 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.52□□□□□ -2.17
Pdx1P52946 Gm24977-201ENSMUST00000083106 163 ntBASIC1.52□□□□□ -2.17
Pdx1P52946 Mir547-201ENSMUST00000102051 78 ntBASIC1.51□□□□□ -2.17
Pdx1P52946 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Pdx1P52946 Gm23766-201ENSMUST00000103894 80 ntBASIC1.51□□□□□ -2.17
Pdx1P52946 Gm22796-201ENSMUST00000157234 106 ntBASIC1.51□□□□□ -2.17
Pdx1P52946 Gm24718-201ENSMUST00000157521 136 ntBASIC1.51□□□□□ -2.17
Pdx1P52946 Gm22770-201ENSMUST00000158368 67 ntBASIC1.51□□□□□ -2.17
Pdx1P52946 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.51□□□□□ -2.17
Pdx1P52946 Gm27722-201ENSMUST00000183908 76 ntBASIC1.51□□□□□ -2.17
Pdx1P52946 Gm37330-201ENSMUST00000192606 153 ntBASIC1.51□□□□□ -2.17
Pdx1P52946 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.51□□□□□ -2.17
Pdx1P52946 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.51□□□□□ -2.17
Pdx1P52946 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.51□□□□□ -2.17
Pdx1P52946 Gm23790-201ENSMUST00000083013 107 ntBASIC1.51□□□□□ -2.17
Pdx1P52946 Gm22354-201ENSMUST00000083919 70 ntBASIC1.51□□□□□ -2.17
Pdx1P52946 Mir489-201ENSMUST00000093599 107 ntBASIC1.51□□□□□ -2.17
Pdx1P52946 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.5□□□□□ -2.17
Pdx1P52946 Gm23015-201ENSMUST00000104145 128 ntBASIC1.5□□□□□ -2.17
Pdx1P52946 Gm26420-201ENSMUST00000104273 103 ntBASIC1.5□□□□□ -2.17
Pdx1P52946 Snord100-201ENSMUST00000116836 74 ntBASIC1.5□□□□□ -2.17
Pdx1P52946 Gm23172-201ENSMUST00000157160 124 ntBASIC1.5□□□□□ -2.17
Pdx1P52946 Gm24559-201ENSMUST00000157519 121 ntBASIC1.5□□□□□ -2.17
Pdx1P52946 Gm23558-201ENSMUST00000157823 80 ntBASIC1.5□□□□□ -2.17
Pdx1P52946 Gm23714-201ENSMUST00000179259 105 ntBASIC1.5□□□□□ -2.17
Pdx1P52946 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Pdx1P52946 Gm22306-201ENSMUST00000082692 107 ntBASIC1.5□□□□□ -2.17
Pdx1P52946 Gm26326-201ENSMUST00000083070 129 ntBASIC1.5□□□□□ -2.17
Pdx1P52946 Gm24615-201ENSMUST00000083268 113 ntBASIC1.5□□□□□ -2.17
Pdx1P52946 Gm22972-201ENSMUST00000083297 131 ntBASIC1.5□□□□□ -2.17
Pdx1P52946 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.5□□□□□ -2.17
Pdx1P52946 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.5□□□□□ -2.17
Pdx1P52946 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Pdx1P52946 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.49□□□□□ -2.17
Pdx1P52946 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Pdx1P52946 Gm15289-201ENSMUST00000117793 244 ntBASIC1.49□□□□□ -2.17
Pdx1P52946 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.49□□□□□ -2.17
Pdx1P52946 Gm26415-201ENSMUST00000157673 292 ntBASIC1.49□□□□□ -2.17
Pdx1P52946 Gm26004-201ENSMUST00000158804 116 ntBASIC1.49□□□□□ -2.17
Pdx1P52946 Gm22708-201ENSMUST00000158987 103 ntBASIC1.49□□□□□ -2.17
Pdx1P52946 Gm20477-201ENSMUST00000174028 280 ntBASIC1.49□□□□□ -2.17
Pdx1P52946 Gm27672-201ENSMUST00000183751 204 ntBASIC1.49□□□□□ -2.17
Pdx1P52946 Mir3961-201ENSMUST00000198795 59 ntBASIC1.49□□□□□ -2.17
Pdx1P52946 Gm45754-201ENSMUST00000212380 279 ntBASIC1.49□□□□□ -2.17
Pdx1P52946 Snora41-201ENSMUST00000082668 132 ntBASIC1.49□□□□□ -2.17
Pdx1P52946 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.49□□□□□ -2.17
Pdx1P52946 Gm22935-201ENSMUST00000103960 104 ntBASIC1.48□□□□□ -2.17
Pdx1P52946 Gm24468-201ENSMUST00000104489 104 ntBASIC1.48□□□□□ -2.17
Pdx1P52946 Mir873a-201ENSMUST00000104863 77 ntBASIC1.48□□□□□ -2.17
Pdx1P52946 Gm22196-201ENSMUST00000116865 109 ntBASIC1.48□□□□□ -2.17
Pdx1P52946 Gm22603-201ENSMUST00000157603 96 ntBASIC1.48□□□□□ -2.17
Pdx1P52946 Gm23113-201ENSMUST00000158477 99 ntBASIC1.48□□□□□ -2.17
Pdx1P52946 Gm23194-201ENSMUST00000158813 105 ntBASIC1.48□□□□□ -2.17
Pdx1P52946 Snord87-201ENSMUST00000175437 87 ntBASIC1.48□□□□□ -2.17
Pdx1P52946 Gm26498-201ENSMUST00000177799 79 ntBASIC1.48□□□□□ -2.17
Pdx1P52946 Gm26435-201ENSMUST00000179026 107 ntBASIC1.48□□□□□ -2.17
Pdx1P52946 Gm26466-201ENSMUST00000179615 79 ntBASIC1.48□□□□□ -2.17
Pdx1P52946 Gm26230-201ENSMUST00000180141 79 ntBASIC1.48□□□□□ -2.17
Pdx1P52946 AC166341.8-201ENSMUST00000221267 108 ntBASIC1.48□□□□□ -2.17
Pdx1P52946 AC126939.1-201ENSMUST00000224943 226 ntBASIC1.48□□□□□ -2.17
Pdx1P52946 Gm14567-201ENSMUST00000117155 174 ntBASIC1.47□□□□□ -2.17
Pdx1P52946 Gm14882-201ENSMUST00000117216 218 ntBASIC1.47□□□□□ -2.17
Pdx1P52946 Gm22221-201ENSMUST00000157362 103 ntBASIC1.47□□□□□ -2.17
Pdx1P52946 Mir3094-201ENSMUST00000175121 64 ntBASIC1.47□□□□□ -2.17
Pdx1P52946 Mir6928-201ENSMUST00000185166 70 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 193.4 ms