Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm25462-201ENSMUST00000177833 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm26059-201ENSMUST00000177865 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm22255-201ENSMUST00000177933 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm25146-201ENSMUST00000177976 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm25523-201ENSMUST00000178044 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm24585-201ENSMUST00000178104 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm22627-201ENSMUST00000178127 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm22912-201ENSMUST00000178242 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm24866-201ENSMUST00000178338 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm22524-201ENSMUST00000178357 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm25710-201ENSMUST00000178367 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm23575-201ENSMUST00000178406 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm24872-201ENSMUST00000178434 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm22449-201ENSMUST00000178924 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm24702-201ENSMUST00000178965 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm24206-201ENSMUST00000179011 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm24528-201ENSMUST00000179164 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm22909-201ENSMUST00000179190 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm26334-201ENSMUST00000179403 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm25463-201ENSMUST00000179405 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm25742-201ENSMUST00000179530 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm25209-201ENSMUST00000179576 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm26392-201ENSMUST00000179661 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm25230-201ENSMUST00000179740 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm26434-201ENSMUST00000179778 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm25741-201ENSMUST00000179825 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm24759-201ENSMUST00000179827 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm24219-201ENSMUST00000179861 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm27399-201ENSMUST00000184250 78 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Gm23254-201ENSMUST00000097244 79 ntBASIC2.35□□□□□ -2.03
Rfx1P48377 Mir7675-201ENSMUST00000184262 58 ntBASIC2.34□□□□□ -2.03
Rfx1P48377 Mir6950-201ENSMUST00000184438 73 ntBASIC2.34□□□□□ -2.03
Rfx1P48377 Gm27544-201ENSMUST00000185069 155 ntBASIC2.34□□□□□ -2.03
Rfx1P48377 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.34□□□□□ -2.03
Rfx1P48377 Gm25684-201ENSMUST00000083941 107 ntBASIC2.34□□□□□ -2.03
Rfx1P48377 Mir466-201ENSMUST00000093591 73 ntBASIC2.34□□□□□ -2.03
Rfx1P48377 Gm26498-201ENSMUST00000177799 79 ntBASIC2.33□□□□□ -2.04
Rfx1P48377 Gm8034-201ENSMUST00000178853 132 ntBASIC2.33□□□□□ -2.04
Rfx1P48377 Gm26230-201ENSMUST00000180141 79 ntBASIC2.33□□□□□ -2.04
Rfx1P48377 Gm42795-201ENSMUST00000198847 76 ntBASIC2.33□□□□□ -2.04
Rfx1P48377 Gm44477-201ENSMUST00000199661 110 ntBASIC2.33□□□□□ -2.04
Rfx1P48377 Snord14a-201ENSMUST00000082807 87 ntBASIC2.33□□□□□ -2.04
Rfx1P48377 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Rfx1P48377 Gm23951-201ENSMUST00000104029 132 ntBASIC2.32□□□□□ -2.04
Rfx1P48377 Gm22494-201ENSMUST00000104495 128 ntBASIC2.32□□□□□ -2.04
Rfx1P48377 Gm23083-201ENSMUST00000157851 116 ntBASIC2.32□□□□□ -2.04
Rfx1P48377 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Rfx1P48377 Mir7226-201ENSMUST00000184953 60 ntBASIC2.32□□□□□ -2.04
Rfx1P48377 Gm27959-201ENSMUST00000185172 111 ntBASIC2.32□□□□□ -2.04
Rfx1P48377 Gm25610-201ENSMUST00000104016 129 ntBASIC2.31□□□□□ -2.04
Rfx1P48377 Gm24234-201ENSMUST00000104316 107 ntBASIC2.31□□□□□ -2.04
Rfx1P48377 Gm15536-201ENSMUST00000121411 114 ntBASIC2.31□□□□□ -2.04
Rfx1P48377 Gm23170-201ENSMUST00000157158 106 ntBASIC2.31□□□□□ -2.04
Rfx1P48377 Gm24913-201ENSMUST00000157286 107 ntBASIC2.31□□□□□ -2.04
Rfx1P48377 Gm24770-201ENSMUST00000158505 92 ntBASIC2.31□□□□□ -2.04
Rfx1P48377 Gm22425-201ENSMUST00000158532 138 ntBASIC2.31□□□□□ -2.04
Rfx1P48377 Gm44807-201ENSMUST00000206115 154 ntBASIC2.31□□□□□ -2.04
Rfx1P48377 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Rfx1P48377 Mir544-201ENSMUST00000103813 78 ntBASIC2.3□□□□□ -2.04
Rfx1P48377 Mir344e-201ENSMUST00000104677 66 ntBASIC2.3□□□□□ -2.04
Rfx1P48377 Gm25678-201ENSMUST00000174984 73 ntBASIC2.3□□□□□ -2.04
Rfx1P48377 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.3□□□□□ -2.04
Rfx1P48377 Mir7217-201ENSMUST00000200304 62 ntBASIC2.3□□□□□ -2.04
Rfx1P48377 Gm42844-201ENSMUST00000200355 112 ntBASIC2.3□□□□□ -2.04
Rfx1P48377 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.3□□□□□ -2.04
Rfx1P48377 Gm22055-201ENSMUST00000083388 107 ntBASIC2.3□□□□□ -2.04
Rfx1P48377 Gm24984-201ENSMUST00000104454 133 ntBASIC2.29□□□□□ -2.04
Rfx1P48377 Gm23654-201ENSMUST00000116758 126 ntBASIC2.29□□□□□ -2.04
Rfx1P48377 Gm22196-201ENSMUST00000116865 109 ntBASIC2.29□□□□□ -2.04
Rfx1P48377 Gm22929-201ENSMUST00000175517 107 ntBASIC2.29□□□□□ -2.04
Rfx1P48377 Gm22264-201ENSMUST00000178200 107 ntBASIC2.29□□□□□ -2.04
Rfx1P48377 Gm28256-201ENSMUST00000188953 139 ntBASIC2.29□□□□□ -2.04
Rfx1P48377 Gm28559-201ENSMUST00000190532 139 ntBASIC2.29□□□□□ -2.04
Rfx1P48377 Gm23095-201ENSMUST00000083446 107 ntBASIC2.29□□□□□ -2.04
Rfx1P48377 Gm25090-201ENSMUST00000104000 132 ntBASIC2.28□□□□□ -2.04
Rfx1P48377 Gm25444-201ENSMUST00000158999 113 ntBASIC2.28□□□□□ -2.04
Rfx1P48377 Mir30d-201ENSMUST00000083503 82 ntBASIC2.28□□□□□ -2.04
Rfx1P48377 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Rfx1P48377 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Rfx1P48377 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Rfx1P48377 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Rfx1P48377 Gm24229-201ENSMUST00000158830 118 ntBASIC2.27□□□□□ -2.05
Rfx1P48377 Gm23813-201ENSMUST00000175153 77 ntBASIC2.27□□□□□ -2.05
Rfx1P48377 Gm24572-201ENSMUST00000175505 88 ntBASIC2.27□□□□□ -2.05
Rfx1P48377 Mir7026-201ENSMUST00000184384 67 ntBASIC2.27□□□□□ -2.05
Rfx1P48377 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.27□□□□□ -2.05
Rfx1P48377 Snora41-201ENSMUST00000082668 132 ntBASIC2.27□□□□□ -2.05
Rfx1P48377 Gm23299-201ENSMUST00000082708 79 ntBASIC2.27□□□□□ -2.05
Rfx1P48377 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Rfx1P48377 Gm23950-201ENSMUST00000104026 129 ntBASIC2.26□□□□□ -2.05
Rfx1P48377 Gm14674-201ENSMUST00000117816 342 ntBASIC2.26□□□□□ -2.05
Rfx1P48377 Gm24478-201ENSMUST00000157439 158 ntBASIC2.26□□□□□ -2.05
Rfx1P48377 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.26□□□□□ -2.05
Rfx1P48377 Gm27443-201ENSMUST00000184660 98 ntBASIC2.26□□□□□ -2.05
Rfx1P48377 Mir3569-201ENSMUST00000185080 58 ntBASIC2.26□□□□□ -2.05
Rfx1P48377 Gm44462-201ENSMUST00000199696 129 ntBASIC2.26□□□□□ -2.05
Rfx1P48377 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.26□□□□□ -2.05
Rfx1P48377 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 153.1 ms