Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.67□□□□□ -2.3
Traf1P39428 Gm25138-201ENSMUST00000083248 136 ntBASIC0.67□□□□□ -2.3
Traf1P39428 Gm26123-201ENSMUST00000083363 135 ntBASIC0.67□□□□□ -2.3
Traf1P39428 Gm24929-201ENSMUST00000083403 139 ntBASIC0.67□□□□□ -2.3
Traf1P39428 Mir30a-201ENSMUST00000083471 71 ntBASIC0.67□□□□□ -2.3
Traf1P39428 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.66□□□□□ -2.3
Traf1P39428 Gm25315-201ENSMUST00000116823 121 ntBASIC0.66□□□□□ -2.3
Traf1P39428 Gm13577-201ENSMUST00000121365 205 ntBASIC0.66□□□□□ -2.3
Traf1P39428 Gm22522-201ENSMUST00000158271 151 ntBASIC0.66□□□□□ -2.3
Traf1P39428 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.66□□□□□ -2.3
Traf1P39428 Gm25464-201ENSMUST00000175481 107 ntBASIC0.66□□□□□ -2.3
Traf1P39428 Gm27402-201ENSMUST00000183890 120 ntBASIC0.66□□□□□ -2.3
Traf1P39428 Gm44488-201ENSMUST00000199467 119 ntBASIC0.66□□□□□ -2.3
Traf1P39428 AL606472.1-201ENSMUST00000224628 275 ntBASIC0.66□□□□□ -2.3
Traf1P39428 Gm25496-201ENSMUST00000104430 120 ntBASIC0.65□□□□□ -2.31
Traf1P39428 Gm25110-201ENSMUST00000116684 121 ntBASIC0.65□□□□□ -2.31
Traf1P39428 Gm25775-201ENSMUST00000116716 121 ntBASIC0.65□□□□□ -2.31
Traf1P39428 Gm24795-201ENSMUST00000116737 121 ntBASIC0.65□□□□□ -2.31
Traf1P39428 Gm25171-201ENSMUST00000116926 121 ntBASIC0.65□□□□□ -2.31
Traf1P39428 Gm14837-201ENSMUST00000119688 206 ntBASIC0.65□□□□□ -2.31
Traf1P39428 Gm23892-201ENSMUST00000158105 130 ntBASIC0.65□□□□□ -2.31
Traf1P39428 Gm44409-201ENSMUST00000198810 166 ntBASIC0.65□□□□□ -2.31
Traf1P39428 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.65□□□□□ -2.31
Traf1P39428 Gm25141-201ENSMUST00000083177 107 ntBASIC0.65□□□□□ -2.31
Traf1P39428 Mir466p-201ENSMUST00000103925 89 ntBASIC0.64□□□□□ -2.31
Traf1P39428 Mir1898-201ENSMUST00000122643 83 ntBASIC0.64□□□□□ -2.31
Traf1P39428 Gm22999-201ENSMUST00000157082 88 ntBASIC0.64□□□□□ -2.31
Traf1P39428 Gm25771-201ENSMUST00000158565 144 ntBASIC0.64□□□□□ -2.31
Traf1P39428 Gm26236-201ENSMUST00000175536 137 ntBASIC0.64□□□□□ -2.31
Traf1P39428 Gm23141-201ENSMUST00000178682 94 ntBASIC0.64□□□□□ -2.31
Traf1P39428 Gm44989-201ENSMUST00000204749 217 ntBASIC0.64□□□□□ -2.31
Traf1P39428 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
Traf1P39428 Gm14567-201ENSMUST00000117155 174 ntBASIC0.63□□□□□ -2.31
Traf1P39428 Gm26279-201ENSMUST00000157095 102 ntBASIC0.63□□□□□ -2.31
Traf1P39428 Gm27289-201ENSMUST00000183341 82 ntBASIC0.63□□□□□ -2.31
Traf1P39428 Gm37997-201ENSMUST00000193515 267 ntBASIC0.63□□□□□ -2.31
Traf1P39428 Gm19790-201ENSMUST00000214414 251 ntBASIC0.63□□□□□ -2.31
Traf1P39428 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.63□□□□□ -2.31
Traf1P39428 Gm22302-201ENSMUST00000082657 106 ntBASIC0.63□□□□□ -2.31
Traf1P39428 Gm26326-201ENSMUST00000083070 129 ntBASIC0.63□□□□□ -2.31
Traf1P39428 Gm26076-201ENSMUST00000104065 105 ntBASIC0.62□□□□□ -2.31
Traf1P39428 Gm23126-201ENSMUST00000104260 134 ntBASIC0.62□□□□□ -2.31
Traf1P39428 Gm6272-201ENSMUST00000121256 171 ntBASIC0.62□□□□□ -2.31
Traf1P39428 Gm26484-201ENSMUST00000158018 106 ntBASIC0.62□□□□□ -2.31
Traf1P39428 Gm23416-201ENSMUST00000175520 95 ntBASIC0.62□□□□□ -2.31
Traf1P39428 Gm24415-201ENSMUST00000180218 107 ntBASIC0.62□□□□□ -2.31
Traf1P39428 Gm28724-201ENSMUST00000186149 625 ntBASIC0.62□□□□□ -2.31
Traf1P39428 Gm44211-201ENSMUST00000204867 145 ntBASIC0.62□□□□□ -2.31
Traf1P39428 Gm8219-201ENSMUST00000218309 242 ntBASIC0.62□□□□□ -2.31
Traf1P39428 Gm24527-201ENSMUST00000082920 107 ntBASIC0.62□□□□□ -2.31
Traf1P39428 Gm25895-201ENSMUST00000083714 100 ntBASIC0.62□□□□□ -2.31
Traf1P39428 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Traf1P39428 Gm22469-201ENSMUST00000104118 133 ntBASIC0.61□□□□□ -2.31
Traf1P39428 Gm23321-201ENSMUST00000104465 126 ntBASIC0.61□□□□□ -2.31
Traf1P39428 Snord100-201ENSMUST00000116836 74 ntBASIC0.61□□□□□ -2.31
Traf1P39428 Gm14838-201ENSMUST00000118913 248 ntBASIC0.61□□□□□ -2.31
Traf1P39428 Gm14946-201ENSMUST00000119859 296 ntBASIC0.61□□□□□ -2.31
Traf1P39428 Gm22790-201ENSMUST00000157229 129 ntBASIC0.61□□□□□ -2.31
Traf1P39428 Gm26285-201ENSMUST00000177923 107 ntBASIC0.61□□□□□ -2.31
Traf1P39428 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.61□□□□□ -2.31
Traf1P39428 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.61□□□□□ -2.31
Traf1P39428 Gm23622-201ENSMUST00000082460 107 ntBASIC0.61□□□□□ -2.31
Traf1P39428 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.61□□□□□ -2.31
Traf1P39428 Gm24258-201ENSMUST00000083739 133 ntBASIC0.61□□□□□ -2.31
Traf1P39428 Gm13345-201ENSMUST00000121928 228 ntBASIC0.6□□□□□ -2.31
Traf1P39428 Gm27579-201ENSMUST00000158113 63 ntBASIC0.6□□□□□ -2.31
Traf1P39428 Gm25494-201ENSMUST00000158143 100 ntBASIC0.6□□□□□ -2.31
Traf1P39428 Gm25718-201ENSMUST00000158632 118 ntBASIC0.6□□□□□ -2.31
Traf1P39428 Gm25749-201ENSMUST00000175485 111 ntBASIC0.6□□□□□ -2.31
Traf1P39428 Gm22258-201ENSMUST00000177645 94 ntBASIC0.6□□□□□ -2.31
Traf1P39428 Gm26032-201ENSMUST00000178535 94 ntBASIC0.6□□□□□ -2.31
Traf1P39428 Gm25210-201ENSMUST00000178813 94 ntBASIC0.6□□□□□ -2.31
Traf1P39428 Gm25157-201ENSMUST00000178914 94 ntBASIC0.6□□□□□ -2.31
Traf1P39428 Gm22046-201ENSMUST00000179027 94 ntBASIC0.6□□□□□ -2.31
Traf1P39428 Gm22941-201ENSMUST00000179630 94 ntBASIC0.6□□□□□ -2.31
Traf1P39428 Gm25471-201ENSMUST00000180126 94 ntBASIC0.6□□□□□ -2.31
Traf1P39428 Gm38364-201ENSMUST00000191814 179 ntBASIC0.6□□□□□ -2.31
Traf1P39428 Gm43944-201ENSMUST00000205220 120 ntBASIC0.6□□□□□ -2.31
Traf1P39428 Gm22744-201ENSMUST00000083444 65 ntBASIC0.6□□□□□ -2.31
Traf1P39428 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
Traf1P39428 Gm24867-201ENSMUST00000104161 107 ntBASIC0.59□□□□□ -2.31
Traf1P39428 Gm22815-201ENSMUST00000157451 62 ntBASIC0.59□□□□□ -2.31
Traf1P39428 Gm26160-201ENSMUST00000158965 63 ntBASIC0.59□□□□□ -2.31
Traf1P39428 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.59□□□□□ -2.31
Traf1P39428 Gm22887-201ENSMUST00000178586 107 ntBASIC0.59□□□□□ -2.31
Traf1P39428 AC161426.1-201ENSMUST00000214137 286 ntBASIC0.59□□□□□ -2.31
Traf1P39428 Gm24385-201ENSMUST00000122694 350 ntBASIC0.58□□□□□ -2.32
Traf1P39428 Gm24509-201ENSMUST00000157086 101 ntBASIC0.58□□□□□ -2.32
Traf1P39428 Gm25358-201ENSMUST00000157189 101 ntBASIC0.58□□□□□ -2.32
Traf1P39428 Gm23605-201ENSMUST00000157255 127 ntBASIC0.58□□□□□ -2.32
Traf1P39428 Mir6375-201ENSMUST00000197176 95 ntBASIC0.58□□□□□ -2.32
Traf1P39428 Gm44490-201ENSMUST00000198566 127 ntBASIC0.58□□□□□ -2.32
Traf1P39428 Gm26156-201ENSMUST00000116999 123 ntBASIC0.57□□□□□ -2.32
Traf1P39428 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.57□□□□□ -2.32
Traf1P39428 Gm24547-201ENSMUST00000158649 149 ntBASIC0.57□□□□□ -2.32
Traf1P39428 Gm26426-201ENSMUST00000177866 123 ntBASIC0.57□□□□□ -2.32
Traf1P39428 Gm26060-201ENSMUST00000180094 123 ntBASIC0.57□□□□□ -2.32
Traf1P39428 Gm43432-201ENSMUST00000196352 121 ntBASIC0.57□□□□□ -2.32
Traf1P39428 Gm44353-201ENSMUST00000200618 138 ntBASIC0.57□□□□□ -2.32
Traf1P39428 Gm23423-201ENSMUST00000082782 106 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 120.6 ms