Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm25945-201ENSMUST00000122484 135 ntBASIC2.53□□□□□ -2
RaraP11416 Gm23656-201ENSMUST00000122626 112 ntBASIC2.53□□□□□ -2
RaraP11416 Gm23986-201ENSMUST00000157144 63 ntBASIC2.53□□□□□ -2
RaraP11416 Gm25113-201ENSMUST00000157185 143 ntBASIC2.53□□□□□ -2
RaraP11416 Gm45471-201ENSMUST00000211270 281 ntBASIC2.53□□□□□ -2
RaraP11416 Gm22622-201ENSMUST00000082870 129 ntBASIC2.53□□□□□ -2
RaraP11416 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.52□□□□□ -2.01
RaraP11416 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.52□□□□□ -2.01
RaraP11416 Gm24922-201ENSMUST00000158511 102 ntBASIC2.52□□□□□ -2.01
RaraP11416 Gm20477-201ENSMUST00000174028 280 ntBASIC2.52□□□□□ -2.01
RaraP11416 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.52□□□□□ -2.01
RaraP11416 Gm24661-201ENSMUST00000083205 104 ntBASIC2.52□□□□□ -2.01
RaraP11416 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RaraP11416 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.51□□□□□ -2.01
RaraP11416 Gm25633-201ENSMUST00000178565 107 ntBASIC2.51□□□□□ -2.01
RaraP11416 Mir7232-201ENSMUST00000197929 74 ntBASIC2.51□□□□□ -2.01
RaraP11416 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.51□□□□□ -2.01
RaraP11416 Gm22805-201ENSMUST00000082739 107 ntBASIC2.51□□□□□ -2.01
RaraP11416 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
RaraP11416 Gm23951-201ENSMUST00000104029 132 ntBASIC2.5□□□□□ -2.01
RaraP11416 Gm26473-201ENSMUST00000116763 127 ntBASIC2.5□□□□□ -2.01
RaraP11416 Gm23601-201ENSMUST00000157259 131 ntBASIC2.5□□□□□ -2.01
RaraP11416 Gm23996-201ENSMUST00000158062 131 ntBASIC2.5□□□□□ -2.01
RaraP11416 Gm23351-201ENSMUST00000158427 125 ntBASIC2.5□□□□□ -2.01
RaraP11416 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.5□□□□□ -2.01
RaraP11416 Gm25796-201ENSMUST00000082645 163 ntBASIC2.5□□□□□ -2.01
RaraP11416 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RaraP11416 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
RaraP11416 AC127302.3-201ENSMUST00000215480 2791 ntBASIC2.49□□□□□ -2.01
RaraP11416 Gm22071-201ENSMUST00000116857 83 ntBASIC2.49□□□□□ -2.01
RaraP11416 Gm23349-201ENSMUST00000158432 98 ntBASIC2.49□□□□□ -2.01
RaraP11416 Mir378a-201ENSMUST00000198300 66 ntBASIC2.49□□□□□ -2.01
RaraP11416 Snora3-201ENSMUST00000083082 132 ntBASIC2.49□□□□□ -2.01
RaraP11416 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RaraP11416 Gm25610-201ENSMUST00000104016 129 ntBASIC2.48□□□□□ -2.01
RaraP11416 Gm24280-201ENSMUST00000104237 134 ntBASIC2.48□□□□□ -2.01
RaraP11416 Gm26342-201ENSMUST00000104557 129 ntBASIC2.48□□□□□ -2.01
RaraP11416 Mir669d-201ENSMUST00000104644 121 ntBASIC2.48□□□□□ -2.01
RaraP11416 Gm13433-201ENSMUST00000121701 240 ntBASIC2.48□□□□□ -2.01
RaraP11416 Gm25370-201ENSMUST00000158159 94 ntBASIC2.48□□□□□ -2.01
RaraP11416 Gm25976-201ENSMUST00000158695 130 ntBASIC2.48□□□□□ -2.01
RaraP11416 Gm44807-201ENSMUST00000206115 154 ntBASIC2.48□□□□□ -2.01
RaraP11416 AC122327.1-201ENSMUST00000220778 108 ntBASIC2.48□□□□□ -2.01
RaraP11416 Gm25788-201ENSMUST00000082721 131 ntBASIC2.48□□□□□ -2.01
RaraP11416 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.48□□□□□ -2.01
RaraP11416 Gm22083-201ENSMUST00000157586 102 ntBASIC2.47□□□□□ -2.01
RaraP11416 Gm25866-201ENSMUST00000158245 112 ntBASIC2.47□□□□□ -2.01
RaraP11416 Gm26213-201ENSMUST00000158582 110 ntBASIC2.47□□□□□ -2.01
RaraP11416 Mir3076-201ENSMUST00000175415 60 ntBASIC2.47□□□□□ -2.01
RaraP11416 Gm25750-201ENSMUST00000175483 112 ntBASIC2.47□□□□□ -2.01
RaraP11416 Mir21c-201ENSMUST00000184910 78 ntBASIC2.47□□□□□ -2.01
RaraP11416 Gm3724-201ENSMUST00000197957 349 ntBASIC2.47□□□□□ -2.01
RaraP11416 Mir423-201ENSMUST00000083584 109 ntBASIC2.47□□□□□ -2.01
RaraP11416 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
RaraP11416 Gm25611-201ENSMUST00000104017 133 ntBASIC2.46□□□□□ -2.02
RaraP11416 Gm26077-201ENSMUST00000104064 123 ntBASIC2.46□□□□□ -2.02
RaraP11416 Gm16561-201ENSMUST00000163001 192 ntBASIC2.46□□□□□ -2.02
RaraP11416 Gm20391-201ENSMUST00000174722 106 ntBASIC2.46□□□□□ -2.02
RaraP11416 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.45□□□□□ -2.02
RaraP11416 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
RaraP11416 Gm14882-201ENSMUST00000117216 218 ntBASIC2.45□□□□□ -2.02
RaraP11416 Gm23788-201ENSMUST00000122535 106 ntBASIC2.45□□□□□ -2.02
RaraP11416 Gm22706-201ENSMUST00000157907 112 ntBASIC2.45□□□□□ -2.02
RaraP11416 Gm25642-201ENSMUST00000175137 66 ntBASIC2.45□□□□□ -2.02
RaraP11416 Mir6379-201ENSMUST00000183392 115 ntBASIC2.45□□□□□ -2.02
RaraP11416 Gm44555-201ENSMUST00000209008 148 ntBASIC2.45□□□□□ -2.02
RaraP11416 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.45□□□□□ -2.02
RaraP11416 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
RaraP11416 Gm23803-201ENSMUST00000104610 132 ntBASIC2.44□□□□□ -2.02
RaraP11416 Gm23033-201ENSMUST00000157996 134 ntBASIC2.44□□□□□ -2.02
RaraP11416 Gm22983-201ENSMUST00000158308 104 ntBASIC2.44□□□□□ -2.02
RaraP11416 Gm24769-201ENSMUST00000158506 129 ntBASIC2.44□□□□□ -2.02
RaraP11416 Mir3075-201ENSMUST00000175340 85 ntBASIC2.44□□□□□ -2.02
RaraP11416 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.44□□□□□ -2.02
RaraP11416 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.44□□□□□ -2.02
RaraP11416 Gm26109-201ENSMUST00000083970 70 ntBASIC2.44□□□□□ -2.02
RaraP11416 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.44□□□□□ -2.02
RaraP11416 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RaraP11416 Gm27959-201ENSMUST00000185172 111 ntBASIC2.43□□□□□ -2.02
RaraP11416 Gm26123-201ENSMUST00000083363 135 ntBASIC2.43□□□□□ -2.02
RaraP11416 Snord80-201ENSMUST00000083801 81 ntBASIC2.43□□□□□ -2.02
RaraP11416 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
RaraP11416 Mir802-201ENSMUST00000103258 97 ntBASIC2.42□□□□□ -2.02
RaraP11416 Gm22815-201ENSMUST00000157451 62 ntBASIC2.42□□□□□ -2.02
RaraP11416 Gm25329-201ENSMUST00000158041 126 ntBASIC2.42□□□□□ -2.02
RaraP11416 Gm23261-201ENSMUST00000158316 136 ntBASIC2.42□□□□□ -2.02
RaraP11416 Gm25241-201ENSMUST00000174909 84 ntBASIC2.42□□□□□ -2.02
RaraP11416 Gm26217-201ENSMUST00000175212 84 ntBASIC2.42□□□□□ -2.02
RaraP11416 AC140930.2-201ENSMUST00000221803 109 ntBASIC2.42□□□□□ -2.02
RaraP11416 AC132833.2-201ENSMUST00000228699 157 ntBASIC2.42□□□□□ -2.02
RaraP11416 Gm22884-201ENSMUST00000083127 140 ntBASIC2.42□□□□□ -2.02
RaraP11416 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.42□□□□□ -2.02
RaraP11416 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.42□□□□□ -2.02
RaraP11416 Gm11248-201ENSMUST00000119568 201 ntBASIC2.41□□□□□ -2.02
RaraP11416 Gm16510-201ENSMUST00000153501 249 ntBASIC2.41□□□□□ -2.02
RaraP11416 Gm22425-201ENSMUST00000158532 138 ntBASIC2.41□□□□□ -2.02
RaraP11416 Gm42935-201ENSMUST00000202004 151 ntBASIC2.41□□□□□ -2.02
RaraP11416 Snord104-201ENSMUST00000083192 70 ntBASIC2.41□□□□□ -2.02
RaraP11416 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.41□□□□□ -2.02
RaraP11416 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 179 ms