Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Gm12837-201ENSMUST00000120131 373 ntBASIC0.49□□□□□ -2.33
NefmP08553 Gm22999-201ENSMUST00000157082 88 ntBASIC0.49□□□□□ -2.33
NefmP08553 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.49□□□□□ -2.33
NefmP08553 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.49□□□□□ -2.33
NefmP08553 Gm26326-201ENSMUST00000083070 129 ntBASIC0.49□□□□□ -2.33
NefmP08553 Gm24929-201ENSMUST00000083403 139 ntBASIC0.49□□□□□ -2.33
NefmP08553 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
NefmP08553 Gm22759-201ENSMUST00000102276 96 ntBASIC0.48□□□□□ -2.33
NefmP08553 Gm26076-201ENSMUST00000104065 105 ntBASIC0.48□□□□□ -2.33
NefmP08553 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.48□□□□□ -2.33
NefmP08553 Gm25464-201ENSMUST00000175481 107 ntBASIC0.48□□□□□ -2.33
NefmP08553 Gm24415-201ENSMUST00000180218 107 ntBASIC0.48□□□□□ -2.33
NefmP08553 Mir6390-201ENSMUST00000184405 129 ntBASIC0.48□□□□□ -2.33
NefmP08553 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.48□□□□□ -2.33
NefmP08553 Mir219b-201ENSMUST00000198317 65 ntBASIC0.48□□□□□ -2.33
NefmP08553 Gm3702-201ENSMUST00000211754 346 ntBASIC0.48□□□□□ -2.33
NefmP08553 Gm19572-201ENSMUST00000214326 338 ntBASIC0.48□□□□□ -2.33
NefmP08553 Gm22576-201ENSMUST00000083733 104 ntBASIC0.48□□□□□ -2.33
NefmP08553 Mir881-201ENSMUST00000104844 78 ntBASIC0.47□□□□□ -2.33
NefmP08553 Snord100-201ENSMUST00000116836 74 ntBASIC0.47□□□□□ -2.33
NefmP08553 Gm23987-201ENSMUST00000117039 129 ntBASIC0.47□□□□□ -2.33
NefmP08553 Gm14567-201ENSMUST00000117155 174 ntBASIC0.47□□□□□ -2.33
NefmP08553 Gm16546-201ENSMUST00000159442 355 ntBASIC0.47□□□□□ -2.33
NefmP08553 Gm22887-201ENSMUST00000178586 107 ntBASIC0.47□□□□□ -2.33
NefmP08553 Snord69-201ENSMUST00000104024 80 ntBASIC0.46□□□□□ -2.34
NefmP08553 Gm15289-201ENSMUST00000117793 244 ntBASIC0.46□□□□□ -2.34
NefmP08553 Gm26152-201ENSMUST00000157427 101 ntBASIC0.46□□□□□ -2.34
NefmP08553 Gm23783-201ENSMUST00000157941 102 ntBASIC0.46□□□□□ -2.34
NefmP08553 Gm6003-201ENSMUST00000187903 463 ntBASIC0.46□□□□□ -2.34
NefmP08553 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.46□□□□□ -2.34
NefmP08553 Gm24555-201ENSMUST00000104548 124 ntBASIC0.45□□□□□ -2.34
NefmP08553 Gm14883-201ENSMUST00000120179 157 ntBASIC0.45□□□□□ -2.34
NefmP08553 Gm24500-201ENSMUST00000158447 124 ntBASIC0.45□□□□□ -2.34
NefmP08553 Gm25267-201ENSMUST00000158522 63 ntBASIC0.45□□□□□ -2.34
NefmP08553 Gm19790-201ENSMUST00000214414 251 ntBASIC0.45□□□□□ -2.34
NefmP08553 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.45□□□□□ -2.34
NefmP08553 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
NefmP08553 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.44□□□□□ -2.34
NefmP08553 Gm22815-201ENSMUST00000157451 62 ntBASIC0.43□□□□□ -2.34
NefmP08553 Gm28020-201ENSMUST00000157739 67 ntBASIC0.43□□□□□ -2.34
NefmP08553 Gm24762-201ENSMUST00000083689 104 ntBASIC0.43□□□□□ -2.34
NefmP08553 Gm26303-201ENSMUST00000116845 119 ntBASIC0.42□□□□□ -2.34
NefmP08553 Gm23838-201ENSMUST00000158067 162 ntBASIC0.42□□□□□ -2.34
NefmP08553 Gm22983-201ENSMUST00000158308 104 ntBASIC0.42□□□□□ -2.34
NefmP08553 Gm25362-201ENSMUST00000158854 105 ntBASIC0.42□□□□□ -2.34
NefmP08553 Gm25300-201ENSMUST00000175284 84 ntBASIC0.42□□□□□ -2.34
NefmP08553 Gm38364-201ENSMUST00000191814 179 ntBASIC0.42□□□□□ -2.34
NefmP08553 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.42□□□□□ -2.34
NefmP08553 Gm23969-201ENSMUST00000083324 74 ntBASIC0.42□□□□□ -2.34
NefmP08553 Mir532-201ENSMUST00000093630 96 ntBASIC0.42□□□□□ -2.34
NefmP08553 Gm13345-201ENSMUST00000121928 228 ntBASIC0.41□□□□□ -2.34
NefmP08553 Gm45541-201ENSMUST00000210443 54 ntBASIC0.41□□□□□ -2.34
NefmP08553 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.41□□□□□ -2.34
NefmP08553 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
NefmP08553 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.4□□□□□ -2.34
NefmP08553 Gm23989-201ENSMUST00000117030 66 ntBASIC0.4□□□□□ -2.35
NefmP08553 Gm24476-201ENSMUST00000157437 131 ntBASIC0.4□□□□□ -2.35
NefmP08553 Gm22706-201ENSMUST00000157907 112 ntBASIC0.4□□□□□ -2.35
NefmP08553 Gm22431-201ENSMUST00000158545 107 ntBASIC0.4□□□□□ -2.35
NefmP08553 Gm25161-201ENSMUST00000158913 132 ntBASIC0.4□□□□□ -2.35
NefmP08553 Gm26160-201ENSMUST00000158965 63 ntBASIC0.4□□□□□ -2.35
NefmP08553 Gm45859-201ENSMUST00000212794 214 ntBASIC0.4□□□□□ -2.35
NefmP08553 Gm22753-201ENSMUST00000083657 107 ntBASIC0.4□□□□□ -2.35
NefmP08553 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.39□□□□□ -2.35
NefmP08553 Gm25611-201ENSMUST00000104017 133 ntBASIC0.39□□□□□ -2.35
NefmP08553 Gm24867-201ENSMUST00000104161 107 ntBASIC0.39□□□□□ -2.35
NefmP08553 Gm12815-201ENSMUST00000121737 135 ntBASIC0.39□□□□□ -2.35
NefmP08553 Gm24728-201ENSMUST00000158226 125 ntBASIC0.39□□□□□ -2.35
NefmP08553 Gm24772-201ENSMUST00000158507 110 ntBASIC0.39□□□□□ -2.35
NefmP08553 Gm27905-201ENSMUST00000184005 207 ntBASIC0.39□□□□□ -2.35
NefmP08553 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.39□□□□□ -2.35
NefmP08553 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.39□□□□□ -2.35
NefmP08553 Gm22340-201ENSMUST00000157717 114 ntBASIC0.38□□□□□ -2.35
NefmP08553 Gm25444-201ENSMUST00000158999 113 ntBASIC0.38□□□□□ -2.35
NefmP08553 Gm26116-201ENSMUST00000175600 77 ntBASIC0.38□□□□□ -2.35
NefmP08553 Gm25633-201ENSMUST00000178565 107 ntBASIC0.38□□□□□ -2.35
NefmP08553 Gm44989-201ENSMUST00000204749 217 ntBASIC0.37□□□□□ -2.35
NefmP08553 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.37□□□□□ -2.35
NefmP08553 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.37□□□□□ -2.35
NefmP08553 Gm6952-201ENSMUST00000118629 159 ntBASIC0.36□□□□□ -2.35
NefmP08553 Gm12686-201ENSMUST00000120546 397 ntBASIC0.36□□□□□ -2.35
NefmP08553 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.36□□□□□ -2.35
NefmP08553 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.36□□□□□ -2.35
NefmP08553 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
NefmP08553 Gm25895-201ENSMUST00000083714 100 ntBASIC0.36□□□□□ -2.35
NefmP08553 Gm25364-201ENSMUST00000158851 107 ntBASIC0.35□□□□□ -2.35
NefmP08553 Mir541-201ENSMUST00000102097 90 ntBASIC0.34□□□□□ -2.36
NefmP08553 Gm23841-201ENSMUST00000116951 114 ntBASIC0.34□□□□□ -2.36
NefmP08553 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
NefmP08553 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.34□□□□□ -2.36
NefmP08553 Gm24445-201ENSMUST00000083981 107 ntBASIC0.34□□□□□ -2.36
NefmP08553 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
NefmP08553 Gm6897-201ENSMUST00000117714 138 ntBASIC0.33□□□□□ -2.36
NefmP08553 Gm14758-201ENSMUST00000119104 138 ntBASIC0.33□□□□□ -2.36
NefmP08553 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.33□□□□□ -2.36
NefmP08553 Gm25375-201ENSMUST00000158157 135 ntBASIC0.33□□□□□ -2.36
NefmP08553 Mir100-201ENSMUST00000175270 80 ntBASIC0.33□□□□□ -2.36
NefmP08553 Gm23567-201ENSMUST00000178005 107 ntBASIC0.33□□□□□ -2.36
NefmP08553 Gm27475-201ENSMUST00000183420 61 ntBASIC0.33□□□□□ -2.36
NefmP08553 Mir7010-201ENSMUST00000183464 63 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 176.1 ms