Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.3□□□□□ -2.2
Cbx4O55187 Gm25797-201ENSMUST00000082640 107 ntBASIC1.3□□□□□ -2.2
Cbx4O55187 Gm23445-201ENSMUST00000082800 107 ntBASIC1.3□□□□□ -2.2
Cbx4O55187 Gm25759-201ENSMUST00000103988 129 ntBASIC1.29□□□□□ -2.2
Cbx4O55187 Gm11644-201ENSMUST00000119735 150 ntBASIC1.29□□□□□ -2.2
Cbx4O55187 Gm22079-201ENSMUST00000157592 106 ntBASIC1.29□□□□□ -2.2
Cbx4O55187 Snord13-201ENSMUST00000157627 104 ntBASIC1.29□□□□□ -2.2
Cbx4O55187 Gm27792-201ENSMUST00000184031 115 ntBASIC1.29□□□□□ -2.2
Cbx4O55187 Gm44470-201ENSMUST00000203913 142 ntBASIC1.29□□□□□ -2.2
Cbx4O55187 Gm22785-201ENSMUST00000104087 132 ntBASIC1.28□□□□□ -2.2
Cbx4O55187 Gm25044-201ENSMUST00000158603 104 ntBASIC1.28□□□□□ -2.2
Cbx4O55187 Gm22802-201ENSMUST00000175621 89 ntBASIC1.28□□□□□ -2.2
Cbx4O55187 Mir6928-201ENSMUST00000185166 70 ntBASIC1.28□□□□□ -2.2
Cbx4O55187 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.28□□□□□ -2.2
Cbx4O55187 Gm44859-201ENSMUST00000207831 94 ntBASIC1.28□□□□□ -2.2
Cbx4O55187 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.28□□□□□ -2.2
Cbx4O55187 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.28□□□□□ -2.2
Cbx4O55187 Gm22999-201ENSMUST00000157082 88 ntBASIC1.27□□□□□ -2.21
Cbx4O55187 Gm25663-201ENSMUST00000157698 135 ntBASIC1.27□□□□□ -2.21
Cbx4O55187 Gm23375-201ENSMUST00000175407 83 ntBASIC1.27□□□□□ -2.21
Cbx4O55187 Gm28862-201ENSMUST00000188246 163 ntBASIC1.27□□□□□ -2.21
Cbx4O55187 Snord96a-201ENSMUST00000082791 81 ntBASIC1.27□□□□□ -2.21
Cbx4O55187 Gm24141-201ENSMUST00000122776 115 ntBASIC1.26□□□□□ -2.21
Cbx4O55187 Gm22796-201ENSMUST00000157234 106 ntBASIC1.26□□□□□ -2.21
Cbx4O55187 Gm23350-201ENSMUST00000158429 103 ntBASIC1.26□□□□□ -2.21
Cbx4O55187 Gm27326-201ENSMUST00000183504 95 ntBASIC1.26□□□□□ -2.21
Cbx4O55187 Gm27365-201ENSMUST00000184041 177 ntBASIC1.26□□□□□ -2.21
Cbx4O55187 Gm45268-201ENSMUST00000210046 370 ntBASIC1.26□□□□□ -2.21
Cbx4O55187 Gm24588-201ENSMUST00000116696 83 ntBASIC1.25□□□□□ -2.21
Cbx4O55187 Gm14568-201ENSMUST00000119321 294 ntBASIC1.25□□□□□ -2.21
Cbx4O55187 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.25□□□□□ -2.21
Cbx4O55187 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC1.25□□□□□ -2.21
Cbx4O55187 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.25□□□□□ -2.21
Cbx4O55187 Gm25060-201ENSMUST00000157374 130 ntBASIC1.25□□□□□ -2.21
Cbx4O55187 Gm24747-201ENSMUST00000157835 87 ntBASIC1.25□□□□□ -2.21
Cbx4O55187 Gm22349-201ENSMUST00000157864 107 ntBASIC1.25□□□□□ -2.21
Cbx4O55187 Gm22332-201ENSMUST00000158072 126 ntBASIC1.25□□□□□ -2.21
Cbx4O55187 Gm23760-201ENSMUST00000158350 116 ntBASIC1.25□□□□□ -2.21
Cbx4O55187 Gm23504-201ENSMUST00000158988 95 ntBASIC1.25□□□□□ -2.21
Cbx4O55187 Traj60-201ENSMUST00000167781 54 ntBASIC1.25□□□□□ -2.21
Cbx4O55187 Gm25241-201ENSMUST00000174909 84 ntBASIC1.25□□□□□ -2.21
Cbx4O55187 Gm26217-201ENSMUST00000175212 84 ntBASIC1.25□□□□□ -2.21
Cbx4O55187 Gm26337-201ENSMUST00000178000 79 ntBASIC1.25□□□□□ -2.21
Cbx4O55187 Gm22862-201ENSMUST00000178593 121 ntBASIC1.25□□□□□ -2.21
Cbx4O55187 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.25□□□□□ -2.21
Cbx4O55187 Mir411-201ENSMUST00000083543 82 ntBASIC1.25□□□□□ -2.21
Cbx4O55187 Gm25650-201ENSMUST00000083784 162 ntBASIC1.25□□□□□ -2.21
Cbx4O55187 Mir3098-201ENSMUST00000175416 87 ntBASIC1.24□□□□□ -2.21
Cbx4O55187 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Cbx4O55187 Mir7665-201ENSMUST00000184907 63 ntBASIC1.24□□□□□ -2.21
Cbx4O55187 Gm23239-201ENSMUST00000083006 181 ntBASIC1.24□□□□□ -2.21
Cbx4O55187 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Cbx4O55187 Gm24865-201ENSMUST00000103246 96 ntBASIC1.23□□□□□ -2.21
Cbx4O55187 Gm25611-201ENSMUST00000104017 133 ntBASIC1.23□□□□□ -2.21
Cbx4O55187 Gm44489-201ENSMUST00000104619 97 ntBASIC1.23□□□□□ -2.21
Cbx4O55187 Gm24915-201ENSMUST00000157288 78 ntBASIC1.23□□□□□ -2.21
Cbx4O55187 Gm25011-201ENSMUST00000158398 126 ntBASIC1.23□□□□□ -2.21
Cbx4O55187 Gm26291-201ENSMUST00000158889 137 ntBASIC1.23□□□□□ -2.21
Cbx4O55187 Gm26123-201ENSMUST00000083363 135 ntBASIC1.23□□□□□ -2.21
Cbx4O55187 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.23□□□□□ -2.21
Cbx4O55187 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.22□□□□□ -2.21
Cbx4O55187 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
Cbx4O55187 Mir466b-3-201ENSMUST00000103806 81 ntBASIC1.22□□□□□ -2.21
Cbx4O55187 Gm25495-201ENSMUST00000104431 131 ntBASIC1.22□□□□□ -2.21
Cbx4O55187 Gm23651-201ENSMUST00000116755 120 ntBASIC1.22□□□□□ -2.21
Cbx4O55187 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.22□□□□□ -2.21
Cbx4O55187 Gm22559-201ENSMUST00000157329 134 ntBASIC1.22□□□□□ -2.21
Cbx4O55187 Gm24717-201ENSMUST00000157522 124 ntBASIC1.22□□□□□ -2.21
Cbx4O55187 Gm22425-201ENSMUST00000158532 138 ntBASIC1.22□□□□□ -2.21
Cbx4O55187 Gm22914-201ENSMUST00000175195 77 ntBASIC1.22□□□□□ -2.21
Cbx4O55187 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.22□□□□□ -2.21
Cbx4O55187 Gm23922-201ENSMUST00000178792 79 ntBASIC1.22□□□□□ -2.21
Cbx4O55187 Gm24657-201ENSMUST00000180085 79 ntBASIC1.22□□□□□ -2.21
Cbx4O55187 Gm22996-201ENSMUST00000180236 79 ntBASIC1.22□□□□□ -2.21
Cbx4O55187 Mir7063-201ENSMUST00000184158 91 ntBASIC1.22□□□□□ -2.21
Cbx4O55187 Gm45492-201ENSMUST00000211611 288 ntBASIC1.22□□□□□ -2.21
Cbx4O55187 Gm23907-201ENSMUST00000104595 189 ntBASIC1.21□□□□□ -2.22
Cbx4O55187 Gm11857-201ENSMUST00000119817 324 ntBASIC1.21□□□□□ -2.22
Cbx4O55187 Gm25428-201ENSMUST00000157608 114 ntBASIC1.21□□□□□ -2.22
Cbx4O55187 AC124739.2-201ENSMUST00000222201 109 ntBASIC1.21□□□□□ -2.22
Cbx4O55187 Mir211-201ENSMUST00000083651 106 ntBASIC1.21□□□□□ -2.22
Cbx4O55187 Mir547-201ENSMUST00000102051 78 ntBASIC1.2□□□□□ -2.22
Cbx4O55187 Gm14946-201ENSMUST00000119859 296 ntBASIC1.2□□□□□ -2.22
Cbx4O55187 Gm16399-201ENSMUST00000181423 219 ntBASIC1.2□□□□□ -2.22
Cbx4O55187 Gm44483-201ENSMUST00000197203 97 ntBASIC1.2□□□□□ -2.22
Cbx4O55187 Gm25814-201ENSMUST00000082754 107 ntBASIC1.2□□□□□ -2.22
Cbx4O55187 Gm25915-201ENSMUST00000104265 126 ntBASIC1.19□□□□□ -2.22
Cbx4O55187 Gm26011-201ENSMUST00000104410 104 ntBASIC1.19□□□□□ -2.22
Cbx4O55187 Gm24238-201ENSMUST00000157792 98 ntBASIC1.19□□□□□ -2.22
Cbx4O55187 Gm23339-201ENSMUST00000158962 139 ntBASIC1.19□□□□□ -2.22
Cbx4O55187 Gm20409-201ENSMUST00000173457 130 ntBASIC1.19□□□□□ -2.22
Cbx4O55187 Gm27446-201ENSMUST00000183963 89 ntBASIC1.19□□□□□ -2.22
Cbx4O55187 AC164561.1-201ENSMUST00000220414 115 ntBASIC1.19□□□□□ -2.22
Cbx4O55187 AC158982.2-201ENSMUST00000226283 184 ntBASIC1.19□□□□□ -2.22
Cbx4O55187 Gm23509-201ENSMUST00000083080 160 ntBASIC1.19□□□□□ -2.22
Cbx4O55187 Gm22297-201ENSMUST00000083312 106 ntBASIC1.19□□□□□ -2.22
Cbx4O55187 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Cbx4O55187 Mir343-201ENSMUST00000102360 75 ntBASIC1.18□□□□□ -2.22
Cbx4O55187 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Cbx4O55187 Gm22966-201ENSMUST00000157957 129 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 192.4 ms