Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm13922-201ENSMUST00000119505 156 ntBASIC-0.43□□□□□ -2.48
Sdc4O35988 Gm15030-201ENSMUST00000119804 484 ntBASIC-0.43□□□□□ -2.48
Sdc4O35988 Gm25771-201ENSMUST00000158565 144 ntBASIC-0.43□□□□□ -2.48
Sdc4O35988 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.43□□□□□ -2.48
Sdc4O35988 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.43□□□□□ -2.48
Sdc4O35988 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC-0.43□□□□□ -2.48
Sdc4O35988 Gm25142-201ENSMUST00000082698 107 ntBASIC-0.43□□□□□ -2.48
Sdc4O35988 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
Sdc4O35988 Gm14307-201ENSMUST00000118930 291 ntBASIC-0.44□□□□□ -2.48
Sdc4O35988 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-0.44□□□□□ -2.48
Sdc4O35988 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.44□□□□□ -2.48
Sdc4O35988 Gm14297-201ENSMUST00000129110 291 ntBASIC-0.44□□□□□ -2.48
Sdc4O35988 Gm16362-201ENSMUST00000135189 214 ntBASIC-0.44□□□□□ -2.48
Sdc4O35988 Gm25827-201ENSMUST00000157089 107 ntBASIC-0.44□□□□□ -2.48
Sdc4O35988 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.44□□□□□ -2.48
Sdc4O35988 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.44□□□□□ -2.48
Sdc4O35988 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.44□□□□□ -2.48
Sdc4O35988 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.44□□□□□ -2.48
Sdc4O35988 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.44□□□□□ -2.48
Sdc4O35988 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
Sdc4O35988 Gm23412-201ENSMUST00000083017 107 ntBASIC-0.44□□□□□ -2.48
Sdc4O35988 Gm25937-201ENSMUST00000083912 107 ntBASIC-0.44□□□□□ -2.48
Sdc4O35988 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.45□□□□□ -2.48
Sdc4O35988 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-0.45□□□□□ -2.48
Sdc4O35988 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.45□□□□□ -2.48
Sdc4O35988 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.45□□□□□ -2.48
Sdc4O35988 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.45□□□□□ -2.48
Sdc4O35988 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.45□□□□□ -2.48
Sdc4O35988 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.45□□□□□ -2.48
Sdc4O35988 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-0.45□□□□□ -2.48
Sdc4O35988 Gm44419-201ENSMUST00000203338 229 ntBASIC-0.45□□□□□ -2.48
Sdc4O35988 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.45□□□□□ -2.48
Sdc4O35988 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.46□□□□□ -2.48
Sdc4O35988 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.46□□□□□ -2.48
Sdc4O35988 Gm22321-201ENSMUST00000157152 104 ntBASIC-0.46□□□□□ -2.48
Sdc4O35988 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.46□□□□□ -2.48
Sdc4O35988 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.46□□□□□ -2.48
Sdc4O35988 Gm44563-201ENSMUST00000207958 178 ntBASIC-0.46□□□□□ -2.48
Sdc4O35988 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.46□□□□□ -2.48
Sdc4O35988 Rny3-201ENSMUST00000083011 102 ntBASIC-0.46□□□□□ -2.48
Sdc4O35988 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-0.47□□□□□ -2.48
Sdc4O35988 Gm13345-201ENSMUST00000121928 228 ntBASIC-0.47□□□□□ -2.48
Sdc4O35988 Gm25323-201ENSMUST00000122555 103 ntBASIC-0.47□□□□□ -2.48
Sdc4O35988 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.47□□□□□ -2.48
Sdc4O35988 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.47□□□□□ -2.48
Sdc4O35988 Gm25982-201ENSMUST00000157920 101 ntBASIC-0.47□□□□□ -2.48
Sdc4O35988 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.47□□□□□ -2.48
Sdc4O35988 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.47□□□□□ -2.48
Sdc4O35988 Gm44149-201ENSMUST00000204256 226 ntBASIC-0.47□□□□□ -2.48
Sdc4O35988 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.47□□□□□ -2.48
Sdc4O35988 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.47□□□□□ -2.48
Sdc4O35988 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.47□□□□□ -2.48
Sdc4O35988 Mir363-201ENSMUST00000093598 75 ntBASIC-0.47□□□□□ -2.48
Sdc4O35988 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.47□□□□□ -2.48
Sdc4O35988 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.48□□□□□ -2.49
Sdc4O35988 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.48□□□□□ -2.49
Sdc4O35988 Gm42606-201ENSMUST00000114209 239 ntBASIC-0.48□□□□□ -2.49
Sdc4O35988 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.48□□□□□ -2.49
Sdc4O35988 Gm26402-201ENSMUST00000158499 113 ntBASIC-0.48□□□□□ -2.49
Sdc4O35988 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.48□□□□□ -2.49
Sdc4O35988 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.48□□□□□ -2.49
Sdc4O35988 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.48□□□□□ -2.49
Sdc4O35988 Gm27997-201ENSMUST00000184942 69 ntBASIC-0.48□□□□□ -2.49
Sdc4O35988 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.48□□□□□ -2.49
Sdc4O35988 Gm44989-201ENSMUST00000204749 217 ntBASIC-0.48□□□□□ -2.49
Sdc4O35988 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.48□□□□□ -2.49
Sdc4O35988 Gm23845-201ENSMUST00000083834 152 ntBASIC-0.48□□□□□ -2.49
Sdc4O35988 Gm25414-201ENSMUST00000101814 107 ntBASIC-0.49□□□□□ -2.49
Sdc4O35988 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
Sdc4O35988 Gm14301-201ENSMUST00000120181 324 ntBASIC-0.49□□□□□ -2.49
Sdc4O35988 Gm15213-201ENSMUST00000122098 216 ntBASIC-0.49□□□□□ -2.49
Sdc4O35988 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.49□□□□□ -2.49
Sdc4O35988 Gm29140-201ENSMUST00000190187 476 ntBASIC-0.49□□□□□ -2.49
Sdc4O35988 Gm37338-201ENSMUST00000191986 127 ntBASIC-0.49□□□□□ -2.49
Sdc4O35988 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm25875-201ENSMUST00000104323 107 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm24192-201ENSMUST00000157978 145 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm22085-201ENSMUST00000158344 110 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm28849-201ENSMUST00000188127 174 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm42594-201ENSMUST00000199511 246 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 AC164117.2-201ENSMUST00000222090 327 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm24316-201ENSMUST00000083041 107 ntBASIC-0.5□□□□□ -2.49
Sdc4O35988 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.51□□□□□ -2.49
Sdc4O35988 Gm23655-201ENSMUST00000122627 105 ntBASIC-0.51□□□□□ -2.49
Sdc4O35988 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-0.51□□□□□ -2.49
Sdc4O35988 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 185.6 ms