Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.57□□□□□ -2
NpcdF8VQB8 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.57□□□□□ -2
NpcdF8VQB8 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
NpcdF8VQB8 Gm27443-201ENSMUST00000184660 98 ntBASIC2.56□□□□□ -2
NpcdF8VQB8 Mir6419-201ENSMUST00000184784 113 ntBASIC2.56□□□□□ -2
NpcdF8VQB8 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.56□□□□□ -2
NpcdF8VQB8 Snord43-201ENSMUST00000199549 108 ntBASIC2.56□□□□□ -2
NpcdF8VQB8 Gm24313-201ENSMUST00000082561 133 ntBASIC2.56□□□□□ -2
NpcdF8VQB8 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
NpcdF8VQB8 Gm14588-201ENSMUST00000119895 172 ntBASIC2.55□□□□□ -2
NpcdF8VQB8 Gm26280-201ENSMUST00000157096 101 ntBASIC2.55□□□□□ -2
NpcdF8VQB8 Gm25444-201ENSMUST00000158999 113 ntBASIC2.55□□□□□ -2
NpcdF8VQB8 Mir6901-201ENSMUST00000185062 62 ntBASIC2.55□□□□□ -2
NpcdF8VQB8 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.55□□□□□ -2
NpcdF8VQB8 Gm22490-201ENSMUST00000157188 119 ntBASIC2.54□□□□□ -2
NpcdF8VQB8 Gm22332-201ENSMUST00000158072 126 ntBASIC2.54□□□□□ -2
NpcdF8VQB8 Gm27979-201ENSMUST00000185126 56 ntBASIC2.54□□□□□ -2
NpcdF8VQB8 Gm43324-201ENSMUST00000197482 289 ntBASIC2.54□□□□□ -2
NpcdF8VQB8 Gm24412-201ENSMUST00000083426 109 ntBASIC2.54□□□□□ -2
NpcdF8VQB8 Mir151-201ENSMUST00000083678 68 ntBASIC2.54□□□□□ -2
NpcdF8VQB8 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.53□□□□□ -2
NpcdF8VQB8 Gm25753-201ENSMUST00000116792 121 ntBASIC2.53□□□□□ -2
NpcdF8VQB8 Gm11856-201ENSMUST00000118712 276 ntBASIC2.53□□□□□ -2
NpcdF8VQB8 Gm22888-201ENSMUST00000158640 77 ntBASIC2.53□□□□□ -2
NpcdF8VQB8 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
NpcdF8VQB8 Gm44490-201ENSMUST00000198566 127 ntBASIC2.53□□□□□ -2
NpcdF8VQB8 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.53□□□□□ -2
NpcdF8VQB8 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.53□□□□□ -2
NpcdF8VQB8 Gm24661-201ENSMUST00000083205 104 ntBASIC2.53□□□□□ -2
NpcdF8VQB8 Gm22055-201ENSMUST00000083388 107 ntBASIC2.53□□□□□ -2
NpcdF8VQB8 Gm22743-201ENSMUST00000083445 133 ntBASIC2.53□□□□□ -2
NpcdF8VQB8 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
NpcdF8VQB8 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
NpcdF8VQB8 Gm25832-201ENSMUST00000104140 130 ntBASIC2.52□□□□□ -2.01
NpcdF8VQB8 Gm25460-201ENSMUST00000157954 127 ntBASIC2.52□□□□□ -2.01
NpcdF8VQB8 Gm24769-201ENSMUST00000158506 129 ntBASIC2.52□□□□□ -2.01
NpcdF8VQB8 Gm25994-201ENSMUST00000175392 101 ntBASIC2.52□□□□□ -2.01
NpcdF8VQB8 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.52□□□□□ -2.01
NpcdF8VQB8 Snora2b-201ENSMUST00000084005 137 ntBASIC2.52□□□□□ -2.01
NpcdF8VQB8 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
NpcdF8VQB8 Mir880-201ENSMUST00000104809 78 ntBASIC2.51□□□□□ -2.01
NpcdF8VQB8 Gm22999-201ENSMUST00000157082 88 ntBASIC2.51□□□□□ -2.01
NpcdF8VQB8 Gm22083-201ENSMUST00000157586 102 ntBASIC2.51□□□□□ -2.01
NpcdF8VQB8 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.51□□□□□ -2.01
NpcdF8VQB8 Mir8119-201ENSMUST00000183371 129 ntBASIC2.51□□□□□ -2.01
NpcdF8VQB8 Mir6352-201ENSMUST00000184495 116 ntBASIC2.51□□□□□ -2.01
NpcdF8VQB8 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NpcdF8VQB8 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.5□□□□□ -2.01
NpcdF8VQB8 Gm12309-201ENSMUST00000119889 182 ntBASIC2.5□□□□□ -2.01
NpcdF8VQB8 Gm22451-201ENSMUST00000122803 151 ntBASIC2.5□□□□□ -2.01
NpcdF8VQB8 Gm16328-201ENSMUST00000126985 196 ntBASIC2.5□□□□□ -2.01
NpcdF8VQB8 Mir1949-201ENSMUST00000157434 141 ntBASIC2.5□□□□□ -2.01
NpcdF8VQB8 Gm25750-201ENSMUST00000175483 112 ntBASIC2.5□□□□□ -2.01
NpcdF8VQB8 Gm27722-201ENSMUST00000183908 76 ntBASIC2.5□□□□□ -2.01
NpcdF8VQB8 Gm37330-201ENSMUST00000192606 153 ntBASIC2.5□□□□□ -2.01
NpcdF8VQB8 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
NpcdF8VQB8 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
NpcdF8VQB8 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.5□□□□□ -2.01
NpcdF8VQB8 Gm26076-201ENSMUST00000104065 105 ntBASIC2.49□□□□□ -2.01
NpcdF8VQB8 Gm12013-201ENSMUST00000121971 155 ntBASIC2.49□□□□□ -2.01
NpcdF8VQB8 Gm23083-201ENSMUST00000157851 116 ntBASIC2.49□□□□□ -2.01
NpcdF8VQB8 Gm22093-201ENSMUST00000158980 111 ntBASIC2.49□□□□□ -2.01
NpcdF8VQB8 Snord87-201ENSMUST00000175437 87 ntBASIC2.49□□□□□ -2.01
NpcdF8VQB8 Gm23267-201ENSMUST00000178490 132 ntBASIC2.49□□□□□ -2.01
NpcdF8VQB8 Gm45429-201ENSMUST00000209527 172 ntBASIC2.49□□□□□ -2.01
NpcdF8VQB8 Gm16510-201ENSMUST00000153501 249 ntBASIC2.48□□□□□ -2.01
NpcdF8VQB8 Gm24900-201ENSMUST00000158128 134 ntBASIC2.48□□□□□ -2.01
NpcdF8VQB8 Gm25069-201ENSMUST00000175238 86 ntBASIC2.48□□□□□ -2.01
NpcdF8VQB8 Mir6377-201ENSMUST00000183760 114 ntBASIC2.48□□□□□ -2.01
NpcdF8VQB8 Mir221-201ENSMUST00000083488 95 ntBASIC2.48□□□□□ -2.01
NpcdF8VQB8 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.47□□□□□ -2.01
NpcdF8VQB8 Gm24913-201ENSMUST00000157286 107 ntBASIC2.47□□□□□ -2.01
NpcdF8VQB8 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.47□□□□□ -2.01
NpcdF8VQB8 Mir107-201ENSMUST00000083660 87 ntBASIC2.47□□□□□ -2.01
NpcdF8VQB8 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
NpcdF8VQB8 Gm22031-201ENSMUST00000116945 126 ntBASIC2.46□□□□□ -2.02
NpcdF8VQB8 Gm11792-201ENSMUST00000120640 168 ntBASIC2.46□□□□□ -2.02
NpcdF8VQB8 Gm26090-201ENSMUST00000157897 128 ntBASIC2.46□□□□□ -2.02
NpcdF8VQB8 Mir3057-201ENSMUST00000175040 91 ntBASIC2.46□□□□□ -2.02
NpcdF8VQB8 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
NpcdF8VQB8 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
NpcdF8VQB8 Gm22727-201ENSMUST00000158090 116 ntBASIC2.45□□□□□ -2.02
NpcdF8VQB8 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NpcdF8VQB8 Mir411-201ENSMUST00000083543 82 ntBASIC2.45□□□□□ -2.02
NpcdF8VQB8 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
NpcdF8VQB8 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NpcdF8VQB8 Gm22004-201ENSMUST00000101884 107 ntBASIC2.44□□□□□ -2.02
NpcdF8VQB8 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.44□□□□□ -2.02
NpcdF8VQB8 Gm20391-201ENSMUST00000174722 106 ntBASIC2.44□□□□□ -2.02
NpcdF8VQB8 Gm24366-201ENSMUST00000175383 86 ntBASIC2.44□□□□□ -2.02
NpcdF8VQB8 Mir7679-201ENSMUST00000183379 63 ntBASIC2.44□□□□□ -2.02
NpcdF8VQB8 Gm43865-201ENSMUST00000204721 127 ntBASIC2.44□□□□□ -2.02
NpcdF8VQB8 Gm26213-201ENSMUST00000158582 110 ntBASIC2.43□□□□□ -2.02
NpcdF8VQB8 Gm23967-201ENSMUST00000175062 78 ntBASIC2.43□□□□□ -2.02
NpcdF8VQB8 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
NpcdF8VQB8 Gm25658-201ENSMUST00000158472 128 ntBASIC2.42□□□□□ -2.02
NpcdF8VQB8 Gm20409-201ENSMUST00000173457 130 ntBASIC2.42□□□□□ -2.02
NpcdF8VQB8 Gm24572-201ENSMUST00000175505 88 ntBASIC2.42□□□□□ -2.02
NpcdF8VQB8 Gm26498-201ENSMUST00000177799 79 ntBASIC2.42□□□□□ -2.02
NpcdF8VQB8 Gm22638-201ENSMUST00000179674 107 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 309 ms