Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Scn1aA2APX8 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Scn1aA2APX8 Snord69-201ENSMUST00000104024 80 ntBASIC0.44□□□□□ -2.34
Scn1aA2APX8 Gm22786-201ENSMUST00000104086 122 ntBASIC0.44□□□□□ -2.34
Scn1aA2APX8 Gm26293-201ENSMUST00000104170 84 ntBASIC0.44□□□□□ -2.34
Scn1aA2APX8 Gm24594-201ENSMUST00000122502 99 ntBASIC0.44□□□□□ -2.34
Scn1aA2APX8 Gm26090-201ENSMUST00000157897 128 ntBASIC0.44□□□□□ -2.34
Scn1aA2APX8 Gm26360-201ENSMUST00000158872 103 ntBASIC0.44□□□□□ -2.34
Scn1aA2APX8 Gm43432-201ENSMUST00000196352 121 ntBASIC0.44□□□□□ -2.34
Scn1aA2APX8 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Scn1aA2APX8 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.44□□□□□ -2.34
Scn1aA2APX8 Mir541-201ENSMUST00000102097 90 ntBASIC0.43□□□□□ -2.34
Scn1aA2APX8 Gm24385-201ENSMUST00000122694 350 ntBASIC0.43□□□□□ -2.34
Scn1aA2APX8 Gm26026-201ENSMUST00000122726 123 ntBASIC0.43□□□□□ -2.34
Scn1aA2APX8 Gm24381-201ENSMUST00000122697 104 ntBASIC0.43□□□□□ -2.34
Scn1aA2APX8 Gm23672-201ENSMUST00000157471 107 ntBASIC0.43□□□□□ -2.34
Scn1aA2APX8 Gm24747-201ENSMUST00000157835 87 ntBASIC0.43□□□□□ -2.34
Scn1aA2APX8 Gm44909-201ENSMUST00000208756 165 ntBASIC0.43□□□□□ -2.34
Scn1aA2APX8 Gm8219-201ENSMUST00000218309 242 ntBASIC0.43□□□□□ -2.34
Scn1aA2APX8 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.43□□□□□ -2.34
Scn1aA2APX8 Gm12771-201ENSMUST00000120246 135 ntBASIC0.42□□□□□ -2.34
Scn1aA2APX8 Gm23278-201ENSMUST00000157911 143 ntBASIC0.42□□□□□ -2.34
Scn1aA2APX8 Gm24729-201ENSMUST00000158225 137 ntBASIC0.42□□□□□ -2.34
Scn1aA2APX8 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.42□□□□□ -2.34
Scn1aA2APX8 Gm26421-201ENSMUST00000104279 132 ntBASIC0.42□□□□□ -2.34
Scn1aA2APX8 Gm24288-201ENSMUST00000157630 144 ntBASIC0.42□□□□□ -2.34
Scn1aA2APX8 Gm25718-201ENSMUST00000158632 118 ntBASIC0.42□□□□□ -2.34
Scn1aA2APX8 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.42□□□□□ -2.34
Scn1aA2APX8 Mir146-201ENSMUST00000083667 65 ntBASIC0.42□□□□□ -2.34
Scn1aA2APX8 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.42□□□□□ -2.34
Scn1aA2APX8 Gm6272-201ENSMUST00000121256 171 ntBASIC0.41□□□□□ -2.34
Scn1aA2APX8 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.41□□□□□ -2.34
Scn1aA2APX8 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.41□□□□□ -2.34
Scn1aA2APX8 Gm25464-201ENSMUST00000175481 107 ntBASIC0.41□□□□□ -2.34
Scn1aA2APX8 Gm23141-201ENSMUST00000178682 94 ntBASIC0.41□□□□□ -2.34
Scn1aA2APX8 Gm37997-201ENSMUST00000193515 267 ntBASIC0.41□□□□□ -2.34
Scn1aA2APX8 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Scn1aA2APX8 Gm43944-201ENSMUST00000205220 120 ntBASIC0.41□□□□□ -2.34
Scn1aA2APX8 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.41□□□□□ -2.34
Scn1aA2APX8 Gm22612-201ENSMUST00000158293 101 ntBASIC0.4□□□□□ -2.34
Scn1aA2APX8 Mir1933-201ENSMUST00000158930 88 ntBASIC0.4□□□□□ -2.34
Scn1aA2APX8 Gm25141-201ENSMUST00000083177 107 ntBASIC0.4□□□□□ -2.34
Scn1aA2APX8 Gm22576-201ENSMUST00000083733 104 ntBASIC0.4□□□□□ -2.34
Scn1aA2APX8 Gm24867-201ENSMUST00000104161 107 ntBASIC0.4□□□□□ -2.35
Scn1aA2APX8 Gm24555-201ENSMUST00000104548 124 ntBASIC0.4□□□□□ -2.35
Scn1aA2APX8 Gm22145-201ENSMUST00000157396 148 ntBASIC0.4□□□□□ -2.35
Scn1aA2APX8 Mir7657-201ENSMUST00000196051 57 ntBASIC0.4□□□□□ -2.35
Scn1aA2APX8 Gm44948-201ENSMUST00000209050 149 ntBASIC0.4□□□□□ -2.35
Scn1aA2APX8 Gm45471-201ENSMUST00000211270 281 ntBASIC0.4□□□□□ -2.35
Scn1aA2APX8 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.4□□□□□ -2.35
Scn1aA2APX8 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.4□□□□□ -2.35
Scn1aA2APX8 Gm24276-201ENSMUST00000102181 110 ntBASIC0.39□□□□□ -2.35
Scn1aA2APX8 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.39□□□□□ -2.35
Scn1aA2APX8 Gm22796-201ENSMUST00000157234 106 ntBASIC0.39□□□□□ -2.35
Scn1aA2APX8 Gm24761-201ENSMUST00000179589 127 ntBASIC0.39□□□□□ -2.35
Scn1aA2APX8 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.39□□□□□ -2.35
Scn1aA2APX8 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.39□□□□□ -2.35
Scn1aA2APX8 Gm22738-201ENSMUST00000083440 147 ntBASIC0.39□□□□□ -2.35
Scn1aA2APX8 Gm22557-201ENSMUST00000157804 102 ntBASIC0.38□□□□□ -2.35
Scn1aA2APX8 Gm22433-201ENSMUST00000158550 142 ntBASIC0.38□□□□□ -2.35
Scn1aA2APX8 Gm26160-201ENSMUST00000158965 63 ntBASIC0.38□□□□□ -2.35
Scn1aA2APX8 Gm36956-201ENSMUST00000193830 214 ntBASIC0.38□□□□□ -2.35
Scn1aA2APX8 Gm38019-201ENSMUST00000195133 380 ntBASIC0.38□□□□□ -2.35
Scn1aA2APX8 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.38□□□□□ -2.35
Scn1aA2APX8 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.38□□□□□ -2.35
Scn1aA2APX8 Snord82-201ENSMUST00000082889 70 ntBASIC0.38□□□□□ -2.35
Scn1aA2APX8 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
Scn1aA2APX8 Gm16307-201ENSMUST00000161269 210 ntBASIC0.38□□□□□ -2.35
Scn1aA2APX8 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.38□□□□□ -2.35
Scn1aA2APX8 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.38□□□□□ -2.35
Scn1aA2APX8 Gm22287-201ENSMUST00000083197 107 ntBASIC0.38□□□□□ -2.35
Scn1aA2APX8 Gm10172-201ENSMUST00000085929 558 ntBASIC0.38□□□□□ -2.35
Scn1aA2APX8 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Scn1aA2APX8 Gm26156-201ENSMUST00000116999 123 ntBASIC0.37□□□□□ -2.35
Scn1aA2APX8 Gm15289-201ENSMUST00000117793 244 ntBASIC0.37□□□□□ -2.35
Scn1aA2APX8 Gm15654-201ENSMUST00000152660 300 ntBASIC0.37□□□□□ -2.35
Scn1aA2APX8 Gm23466-201ENSMUST00000157133 106 ntBASIC0.37□□□□□ -2.35
Scn1aA2APX8 Gm23853-201ENSMUST00000158375 104 ntBASIC0.37□□□□□ -2.35
Scn1aA2APX8 Mir30f-201ENSMUST00000196073 92 ntBASIC0.37□□□□□ -2.35
Scn1aA2APX8 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Scn1aA2APX8 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.37□□□□□ -2.35
Scn1aA2APX8 Gm26338-201ENSMUST00000102372 110 ntBASIC0.37□□□□□ -2.35
Scn1aA2APX8 Mir669g-201ENSMUST00000116809 123 ntBASIC0.37□□□□□ -2.35
Scn1aA2APX8 Gm24963-201ENSMUST00000157916 144 ntBASIC0.37□□□□□ -2.35
Scn1aA2APX8 Gm44488-201ENSMUST00000199467 119 ntBASIC0.37□□□□□ -2.35
Scn1aA2APX8 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.37□□□□□ -2.35
Scn1aA2APX8 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.36□□□□□ -2.35
Scn1aA2APX8 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Scn1aA2APX8 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.36□□□□□ -2.35
Scn1aA2APX8 Gm6985-201ENSMUST00000121255 271 ntBASIC0.36□□□□□ -2.35
Scn1aA2APX8 Gm25985-201ENSMUST00000122677 107 ntBASIC0.36□□□□□ -2.35
Scn1aA2APX8 Gm22983-201ENSMUST00000158308 104 ntBASIC0.36□□□□□ -2.35
Scn1aA2APX8 Gm42623-201ENSMUST00000197225 379 ntBASIC0.36□□□□□ -2.35
Scn1aA2APX8 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Scn1aA2APX8 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
Scn1aA2APX8 Gm26152-201ENSMUST00000157427 101 ntBASIC0.35□□□□□ -2.35
Scn1aA2APX8 Gm27607-201ENSMUST00000185162 122 ntBASIC0.35□□□□□ -2.35
Scn1aA2APX8 Gm37624-201ENSMUST00000193751 219 ntBASIC0.35□□□□□ -2.35
Scn1aA2APX8 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.35□□□□□ -2.35
Scn1aA2APX8 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 257.4 ms